FFCP PHASE1:Hg19::chr1:204121102..204121136,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55224 | |EntrezGene=55224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25575 | |HGNC=25575 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NVF9 | |UniProt=Q9NVF9 | ||
|association_with_transcript=0bp_to_ENST00000367202_5end | |association_with_transcript=0bp_to_ENST00000367202_5end | ||
|cluster_id=chr1:204121102..204121136,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_3_at_ETNK2_5end | |description=CAGE_peak_3_at_ETNK2_5end | ||
|id=chr1:204121102..204121136,- | |id=chr1:204121102..204121136,- | ||
|ontology_enrichment_celltype=CL:0000066!4.94e-17!254;CL:0002321!8.49e-10!248;CL:0000220!3.25e-09!246;CL:0000223!1.57e-08!59 | |ontology_enrichment_celltype=CL:0000066!4.94e-17!254;CL:0002321!8.49e-10!248;CL:0000220!3.25e-09!246;CL:0000223!1.57e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.02e-10;19!CL:0002322;1.46e-08;5!CL:0002368;1.62e-07;13!CL:0002577;2.74e-07;3!CL:0000182;3.00e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,9.19e-12,58;CL:0000349,7.04e-10,19;CL:0000066,6.09e-09,253;CL:0002322,9.86e-09,5;CL:0002076,4.21e-08,42;CL:0002368,1.38e-07,13;CL:0002577,2.85e-07,3;CL:0000182,3.24e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000223;7.01e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!2.66e-10!126;UBERON:0004119!3.32e-09!169;UBERON:0000925!3.32e-09!169;UBERON:0006595!3.32e-09!169;UBERON:0005177!4.92e-09!107;UBERON:0000475!1.34e-08!365;UBERON:0000922!1.89e-08!612;UBERON:0004111!2.19e-08!241;UBERON:0009569!5.34e-08!113;UBERON:0000468!5.41e-08!659;UBERON:0000483!5.51e-08!309;UBERON:0000119!5.66e-08!312;UBERON:0004921!9.53e-08!129;UBERON:0004185!9.53e-08!129;UBERON:0000481!1.08e-07!347;UBERON:0005911!2.57e-07!82;UBERON:0000464!4.16e-07!104;UBERON:0002050!4.39e-07!605;UBERON:0005423!4.39e-07!605;UBERON:0001007!5.80e-07!155;UBERON:0001555!5.80e-07!155;UBERON:0007026!5.80e-07!155;UBERON:0000923!6.17e-07!604;UBERON:0005291!6.17e-07!604;UBERON:0006598!6.17e-07!604;UBERON:0002532!6.17e-07!604;UBERON:0005172!7.27e-07!55;UBERON:0005173!7.27e-07!55;UBERON:0000077!8.11e-07!130;UBERON:0000064!9.52e-07!219;UBERON:0002417!9.96e-07!61;UBERON:0000916!9.96e-07!61 | |ontology_enrichment_uberon=UBERON:0000466!2.66e-10!126;UBERON:0004119!3.32e-09!169;UBERON:0000925!3.32e-09!169;UBERON:0006595!3.32e-09!169;UBERON:0005177!4.92e-09!107;UBERON:0000475!1.34e-08!365;UBERON:0000922!1.89e-08!612;UBERON:0004111!2.19e-08!241;UBERON:0009569!5.34e-08!113;UBERON:0000468!5.41e-08!659;UBERON:0000483!5.51e-08!309;UBERON:0000119!5.66e-08!312;UBERON:0004921!9.53e-08!129;UBERON:0004185!9.53e-08!129;UBERON:0000481!1.08e-07!347;UBERON:0005911!2.57e-07!82;UBERON:0000464!4.16e-07!104;UBERON:0002050!4.39e-07!605;UBERON:0005423!4.39e-07!605;UBERON:0001007!5.80e-07!155;UBERON:0001555!5.80e-07!155;UBERON:0007026!5.80e-07!155;UBERON:0000923!6.17e-07!604;UBERON:0005291!6.17e-07!604;UBERON:0006598!6.17e-07!604;UBERON:0002532!6.17e-07!604;UBERON:0005172!7.27e-07!55;UBERON:0005173!7.27e-07!55;UBERON:0000077!8.11e-07!130;UBERON:0000064!9.52e-07!219;UBERON:0002417!9.96e-07!61;UBERON:0000916!9.96e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.21e-09;7!UBERON:0002107;1.56e-08;19!UBERON:0006925;1.56e-08;19!UBERON:0002365;1.15e-07;31!UBERON:0002330;1.15e-07;31!UBERON:0000478;1.88e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.38e-10,14;UBERON:0000158,4.38e-10,14;UBERON:0004119,7.71e-10,160;UBERON:0000925,7.71e-10,160;UBERON:0006595,7.71e-10,160;UBERON:0000305,1.41e-09,7;UBERON:0009569,1.45e-08,112;UBERON:0002107,1.58e-08,19;UBERON:0006925,1.58e-08,19;UBERON:0008836,1.58e-08,19;UBERON:0004871,2.93e-08,8;UBERON:0005177,4.87e-08,101;UBERON:0001008,7.46e-08,48;UBERON:0002365,8.31e-08,31;UBERON:0002330,8.31e-08,31;UBERON:0004921,1.22e-07,118;UBERON:0000478,2.84e-07,24;UBERON:0006554,3.82e-07,47;UBERON:0008835,4.81e-07,22;UBERON:0003894,4.81e-07,22;UBERON:0005172,8.36e-07,54;UBERON:0005173,8.36e-07,54 | |||
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| ||
|short_description=p3@ETNK2 | |short_description=p3@ETNK2 | ||
}} | }} |
Latest revision as of 00:25, 20 September 2015
Short description: | p3@ETNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ETNK2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000367202_5end |
EntrezGene: | ETNK2 |
HGNC: | 25575 |
UniProt: | Q9NVF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 9.19e-12 | 58 |
extraembryonic cell | 7.04e-10 | 19 |
epithelial cell | 6.09e-09 | 253 |
embryonic stem cell | 9.86e-09 | 5 |
endo-epithelial cell | 4.21e-08 | 42 |
respiratory epithelial cell | 1.38e-07 | 13 |
placental epithelial cell | 2.85e-07 | 3 |
hepatocyte | 3.24e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.38e-10 | 14 |
membranous layer | 4.38e-10 | 14 |
endoderm-derived structure | 7.71e-10 | 160 |
endoderm | 7.71e-10 | 160 |
presumptive endoderm | 7.71e-10 | 160 |
amnion | 1.41e-09 | 7 |
subdivision of trunk | 1.45e-08 | 112 |
liver | 1.58e-08 | 19 |
digestive gland | 1.58e-08 | 19 |
liver bud | 1.58e-08 | 19 |
somatic layer of lateral plate mesoderm | 2.93e-08 | 8 |
trunk region element | 4.87e-08 | 101 |
renal system | 7.46e-08 | 48 |
exocrine gland | 8.31e-08 | 31 |
exocrine system | 8.31e-08 | 31 |
subdivision of digestive tract | 1.22e-07 | 118 |
extraembryonic structure | 2.84e-07 | 24 |
urinary system structure | 3.82e-07 | 47 |
hepatic diverticulum | 4.81e-07 | 22 |
liver primordium | 4.81e-07 | 22 |
abdomen element | 8.36e-07 | 54 |
abdominal segment element | 8.36e-07 | 54 |