FFCP PHASE1:Hg19::chr1:233842857..233842870,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:233842857..233842870,- | |||
|coexpression_cluster_id=C188 | |coexpression_cluster_id=C188 | ||
|description=CAGE_peak_at_chr1:233842857..233842870,- | |description=CAGE_peak_at_chr1:233842857..233842870,- | ||
|id=chr1:233842857..233842870,- | |id=chr1:233842857..233842870,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000243;1.33e-07;15!CL:0000125;1.33e-07;15!CL:0000095;6.77e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.25e-07,15;CL:0000125,1.25e-07,15;CL:0000030,1.25e-07,15;CL:0000339,1.25e-07,15;CL:0000095,6.38e-07,17;CL:0000123,6.38e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0010227;7.48e-30;1!UBERON:0004140;2.73e-29;1!UBERON:0006238;3.13e-11;10!UBERON:0005062;1.96e-08;4!UBERON:0007284;1.96e-08;4!CL:0000339;1.33e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;9.99e-30;1!DOID:3350;1.33e-15;2!DOID:3493;2.21e-15;2!DOID:3093;2.24e-10;11 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,9.99e-30,1;DOID:3350,1.33e-15,2;DOID:3493,2.37e-15,2;DOID:3093,2.03e-10,11 | |||
|ontology_enrichment_uberon=UBERON:0002079!9.91e-07!1 | |ontology_enrichment_uberon=UBERON:0002079!9.91e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;7.48e-30;1!UBERON:0002135;1.33e-29;1!UBERON:0002081;1.15e-15;2!UBERON:0002133;1.54e-15;2!UBERON:0000948;2.40e-12;22!UBERON:0007100;5.94e-11;25!UBERON:0004151;6.73e-11;3!UBERON:0003978;8.17e-11;3!UBERON:0000946;8.17e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,7.48e-30,1;UBERON:0002135,1.33e-29,1;UBERON:0002081,1.15e-15,2;UBERON:0010227,1.15e-15,2;UBERON:0002133,1.54e-15,2;UBERON:0000948,2.35e-11,24;UBERON:0005498,2.35e-11,24;UBERON:0004140,2.35e-11,24;UBERON:0009881,2.35e-11,24;UBERON:0004141,2.35e-11,24;UBERON:0003084,2.35e-11,24;UBERON:0007005,2.35e-11,24;UBERON:0004139,2.35e-11,24;UBERON:0004291,2.35e-11,24;UBERON:0004151,6.73e-11,3;UBERON:0003978,8.17e-11,3;UBERON:0009751,8.17e-11,3;UBERON:0000946,8.17e-11,3;UBERON:0002523,8.17e-11,3;UBERON:0005983,8.17e-11,3;UBERON:0002165,8.17e-11,3;UBERON:0002062,8.17e-11,3;UBERON:0007280,8.17e-11,3;UBERON:0007100,3.58e-10,27 | |||
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|short_description=p@chr1:233842857..233842870,- | |short_description=p@chr1:233842857..233842870,- | ||
}} | }} |
Latest revision as of 05:08, 28 July 2015
Short description: | p@chr1:233842857..233842870, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:233842857..233842870, - |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.25e-07 | 15 |
glial cell | 1.25e-07 | 15 |
glioblast | 1.25e-07 | 15 |
glioblast (sensu Vertebrata) | 1.25e-07 | 15 |
neuron associated cell | 6.38e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.38e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 7.48e-30 | 1 |
mitral valve | 1.33e-29 | 1 |
cardiac atrium | 1.15e-15 | 2 |
future cardiac atrium | 1.15e-15 | 2 |
atrioventricular valve | 1.54e-15 | 2 |
heart | 2.35e-11 | 24 |
primitive heart tube | 2.35e-11 | 24 |
primary heart field | 2.35e-11 | 24 |
anterior lateral plate mesoderm | 2.35e-11 | 24 |
heart tube | 2.35e-11 | 24 |
heart primordium | 2.35e-11 | 24 |
cardiac mesoderm | 2.35e-11 | 24 |
cardiogenic plate | 2.35e-11 | 24 |
heart rudiment | 2.35e-11 | 24 |
cardiac chamber | 6.73e-11 | 3 |
valve | 8.17e-11 | 3 |
cardiac mesenchyme | 8.17e-11 | 3 |
cardial valve | 8.17e-11 | 3 |
tunica intima | 8.17e-11 | 3 |
heart layer | 8.17e-11 | 3 |
endocardium | 8.17e-11 | 3 |
endocardial cushion | 8.17e-11 | 3 |
presumptive endocardium | 8.17e-11 | 3 |
primary circulatory organ | 3.58e-10 | 27 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 9.99e-30 | 1 |
mesenchymal cell neoplasm | 1.33e-15 | 2 |
signet ring cell adenocarcinoma | 2.37e-15 | 2 |
nervous system cancer | 2.03e-10 | 11 |