FFCP PHASE1:Hg19::chr19:11494975..11495003,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:11494975..11495003,-
|short_description=p2@EPOR
|description=CAGE_peak_2_at_EPOR_5end
|association_with_transcript=14bp_to_ENST00000222139,NM_000121,NR_03...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2057 | |EntrezGene=2057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3416 | |HGNC=3416 | ||
|TSSclassifier=strong | |||
|UniProt=P19235 | |UniProt=P19235 | ||
|association_with_transcript=14bp_to_ENST00000222139,NM_000121,NR_033663_5end | |||
|cluster_id=chr19:11494975..11495003,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_2_at_EPOR_5end | |||
|id=chr19:11494975..11495003,- | |||
|ontology_enrichment_celltype=CL:0000222!2.13e-10!119;CL:0000183!5.46e-08!59;CL:0000192!6.19e-08!42;CL:0000514!6.19e-08!42;CL:0000680!2.53e-07!57;CL:0000056!2.53e-07!57;CL:0000355!2.53e-07!57;CL:0000187!3.21e-07!54;CL:0000359!6.97e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000148;8.51e-08;10!CL:0000147;1.90e-07;14!CL:0000359;2.59e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.47e-08,32;CL:0000148,1.37e-07,10;CL:0000541,1.37e-07,10;CL:0000192,2.27e-07,43;CL:0000514,2.27e-07,43;CL:0000147,2.59e-07,14;CL:0002494,8.97e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.40e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.94e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003914!2.52e-18!118;UBERON:0001009!4.02e-18!113;UBERON:0004535!2.75e-17!110;UBERON:0003081!4.45e-16!216;UBERON:0004872!6.80e-15!84;UBERON:0000926!1.09e-12!448;UBERON:0004120!1.09e-12!448;UBERON:0006603!1.09e-12!448;UBERON:0000490!9.94e-12!138;UBERON:0000055!5.15e-11!69;UBERON:0002049!1.08e-10!79;UBERON:0007798!1.08e-10!79;UBERON:0000468!1.87e-10!659;UBERON:0001981!2.84e-10!60;UBERON:0007500!2.84e-10!60;UBERON:0004537!2.84e-10!60;UBERON:0006965!2.84e-10!60;UBERON:0000922!3.45e-09!612;UBERON:0003103!8.22e-09!69;UBERON:0007100!1.23e-08!27;UBERON:0004111!1.83e-08!241;UBERON:0001637!2.54e-08!42;UBERON:0003509!2.54e-08!42;UBERON:0004572!2.54e-08!42;UBERON:0001048!3.58e-08!168;UBERON:0000467!4.83e-08!625;UBERON:0000480!5.88e-08!626;UBERON:0000923!5.94e-08!604;UBERON:0005291!5.94e-08!604;UBERON:0006598!5.94e-08!604;UBERON:0002532!5.94e-08!604;UBERON:0002050!6.24e-08!605;UBERON:0005423!6.24e-08!605;UBERON:0005256!6.64e-08!143;UBERON:0000948!7.70e-08!24;UBERON:0005498!7.70e-08!24;UBERON:0004140!7.70e-08!24;UBERON:0009881!7.70e-08!24;UBERON:0004141!7.70e-08!24;UBERON:0003084!7.70e-08!24;UBERON:0007005!7.70e-08!24;UBERON:0004139!7.70e-08!24;UBERON:0004291!7.70e-08!24;UBERON:0000483!8.32e-08!309;UBERON:0000025!1.13e-07!194;UBERON:0000477!1.28e-07!286;UBERON:0000119!1.68e-07!312;UBERON:0003104!3.04e-07!238;UBERON:0009142!3.04e-07!238;UBERON:0002100!5.17e-07!216;UBERON:0004573!5.80e-07!33;UBERON:0004571!5.80e-07!33;UBERON:0005172!7.90e-07!55;UBERON:0005173!7.90e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.65e-08;25!UBERON:0000948;9.80e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.13e-16,117;UBERON:0001009,5.52e-15,112;UBERON:0004535,4.88e-14,109;UBERON:0003081,5.05e-13,203;UBERON:0004872,9.45e-13,83;UBERON:0007100,1.23e-09,27;UBERON:0000948,1.35e-08,24;UBERON:0005498,1.35e-08,24;UBERON:0004140,1.35e-08,24;UBERON:0009881,1.35e-08,24;UBERON:0004141,1.35e-08,24;UBERON:0003084,1.35e-08,24;UBERON:0007005,1.35e-08,24;UBERON:0004139,1.35e-08,24;UBERON:0004291,1.35e-08,24;UBERON:0005172,2.84e-08,54;UBERON:0005173,2.84e-08,54;UBERON:0000926,4.18e-08,315;UBERON:0004120,4.18e-08,315;UBERON:0006603,4.18e-08,315;UBERON:0000490,4.57e-08,148;UBERON:0007500,1.01e-07,59;UBERON:0001981,1.01e-07,59;UBERON:0004537,1.01e-07,59;UBERON:0006965,1.01e-07,59;UBERON:0003104,1.14e-07,160;UBERON:0009142,1.14e-07,160;UBERON:0003103,1.61e-07,68;UBERON:0000055,2.26e-07,68;UBERON:0005256,2.93e-07,122 | |||
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| ||
|short_description=p2@EPOR | |||
}} | }} |
Latest revision as of 05:12, 25 September 2015
Short description: | p2@EPOR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EPOR_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 14bp_to_ENST00000222139, NM_000121, NR_033663_5end |
EntrezGene: | EPOR |
HGNC: | 3416 |
UniProt: | P19235 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.47e-08 | 32 |
melanocyte | 1.37e-07 | 10 |
melanoblast | 1.37e-07 | 10 |
smooth muscle cell | 2.27e-07 | 43 |
smooth muscle myoblast | 2.27e-07 | 43 |
pigment cell | 2.59e-07 | 14 |
cardiocyte | 8.97e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.13e-16 | 117 |
circulatory system | 5.52e-15 | 112 |
cardiovascular system | 4.88e-14 | 109 |
lateral plate mesoderm | 5.05e-13 | 203 |
splanchnic layer of lateral plate mesoderm | 9.45e-13 | 83 |
primary circulatory organ | 1.23e-09 | 27 |
heart | 1.35e-08 | 24 |
primitive heart tube | 1.35e-08 | 24 |
primary heart field | 1.35e-08 | 24 |
anterior lateral plate mesoderm | 1.35e-08 | 24 |
heart tube | 1.35e-08 | 24 |
heart primordium | 1.35e-08 | 24 |
cardiac mesoderm | 1.35e-08 | 24 |
cardiogenic plate | 1.35e-08 | 24 |
heart rudiment | 1.35e-08 | 24 |
abdomen element | 2.84e-08 | 54 |
abdominal segment element | 2.84e-08 | 54 |
mesoderm | 4.18e-08 | 315 |
mesoderm-derived structure | 4.18e-08 | 315 |
presumptive mesoderm | 4.18e-08 | 315 |
unilaminar epithelium | 4.57e-08 | 148 |
epithelial tube open at both ends | 1.01e-07 | 59 |
blood vessel | 1.01e-07 | 59 |
blood vasculature | 1.01e-07 | 59 |
vascular cord | 1.01e-07 | 59 |
mesenchyme | 1.14e-07 | 160 |
entire embryonic mesenchyme | 1.14e-07 | 160 |
compound organ | 1.61e-07 | 68 |
vessel | 2.26e-07 | 68 |
trunk mesenchyme | 2.93e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.94e-08 | 14 |