FFCP PHASE1:Hg19::chr2:163978153..163978164,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:163978153..163978164,+ | |||
|coexpression_cluster_id=C56 | |coexpression_cluster_id=C56 | ||
|description=CAGE_peak_at_chr2:163978153..163978164,+ | |description=CAGE_peak_at_chr2:163978153..163978164,+ | ||
|id=chr2:163978153..163978164,+ | |id=chr2:163978153..163978164,+ | ||
|ontology_enrichment_celltype=CL:0000946!2.75e-14!1;CL:0000786!2.75e-14!1;CL:0000980!2.75e-14!1;CL:0002253!7.03e-08!2;CL:0000785!8.60e-08!2;CL:0000955!8.60e-08!2;CL:0000818!8.60e-08!2;CL:0000954!8.60e-08!2;CL:0000816!8.60e-08!2 | |ontology_enrichment_celltype=CL:0000946!2.75e-14!1;CL:0000786!2.75e-14!1;CL:0000980!2.75e-14!1;CL:0002253!7.03e-08!2;CL:0000785!8.60e-08!2;CL:0000955!8.60e-08!2;CL:0000818!8.60e-08!2;CL:0000954!8.60e-08!2;CL:0000816!8.60e-08!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;6.62e-41;1!UBERON:0010227;9.91e-41;1!UBERON:0009117;8.81e-17;10!UBERON:0005564;8.81e-17;10!UBERON:0005062;3.42e-11;4!UBERON:0007284;3.42e-11;4!UBERON:0006603;2.45e-08;65!UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002079!5.42e-15!1;UBERON:0002135!6.22e-15!1;UBERON:0002081!3.82e-08!2;UBERON:0002133!4.09e-08!2;UBERON:0000473!1.11e-07!8 | |ontology_enrichment_uberon=UBERON:0002079!5.42e-15!1;UBERON:0002135!6.22e-15!1;UBERON:0002081!3.82e-08!2;UBERON:0002133!4.09e-08!2;UBERON:0000473!1.11e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;9.91e-41;1!UBERON:0002135;2.21e-40;1!UBERON:0002081;3.81e-21;2!UBERON:0002133;5.69e-21;2!UBERON:0000473;1.10e-20;8!UBERON:0000948;4.85e-17;22!UBERON:0003135;2.33e-15;11!UBERON:0007100;4.19e-15;25!UBERON:0004151;1.40e-14;3!UBERON:0003978;1.83e-14;3!UBERON:0000946;1.83e-14;3!UBERON:0000991;1.53e-08;21!UBERON:0003101;3.39e-08;22!UBERON:0000079;3.39e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,9.91e-41,1;UBERON:0002135,1.48e-40,1;UBERON:0002081,3.81e-21,2;UBERON:0010227,3.81e-21,2;UBERON:0002133,4.66e-21,2;UBERON:0000473,1.21e-20,8;UBERON:0000948,1.02e-15,24;UBERON:0005498,1.02e-15,24;UBERON:0004140,1.02e-15,24;UBERON:0009881,1.02e-15,24;UBERON:0004141,1.02e-15,24;UBERON:0003084,1.02e-15,24;UBERON:0007005,1.02e-15,24;UBERON:0004139,1.02e-15,24;UBERON:0004291,1.02e-15,24;UBERON:0003135,2.51e-15,11;UBERON:0004151,1.40e-14,3;UBERON:0003978,1.60e-14,3;UBERON:0009751,1.60e-14,3;UBERON:0000946,1.60e-14,3;UBERON:0002523,1.60e-14,3;UBERON:0005983,1.60e-14,3;UBERON:0002165,1.60e-14,3;UBERON:0002062,1.60e-14,3;UBERON:0007280,1.60e-14,3;UBERON:0007100,4.53e-14,27;UBERON:0000991,1.59e-08,21;UBERON:0009196,1.59e-08,21;UBERON:0009117,1.59e-08,21;UBERON:0005564,1.59e-08,21;UBERON:0004176,3.51e-08,22;UBERON:0003101,3.51e-08,22;UBERON:0000079,3.51e-08,22;UBERON:0004797,5.70e-07,7;UBERON:0001048,8.66e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0,0,0,0,0,4.83721001904429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36401656792831,1.60778478093707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0,0,0,0,0,4.83721001904429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36401656792831,1.60778478093707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:163978153..163978164,+ | |short_description=p@chr2:163978153..163978164,+ | ||
}} | }} |
Latest revision as of 02:01, 29 July 2015
Short description: | p@chr2:163978153..163978164, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:163978153..163978164, + |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 9.91e-41 | 1 |
mitral valve | 1.48e-40 | 1 |
cardiac atrium | 3.81e-21 | 2 |
future cardiac atrium | 3.81e-21 | 2 |
atrioventricular valve | 4.66e-21 | 2 |
testis | 1.21e-20 | 8 |
heart | 1.02e-15 | 24 |
primitive heart tube | 1.02e-15 | 24 |
primary heart field | 1.02e-15 | 24 |
anterior lateral plate mesoderm | 1.02e-15 | 24 |
heart tube | 1.02e-15 | 24 |
heart primordium | 1.02e-15 | 24 |
cardiac mesoderm | 1.02e-15 | 24 |
cardiogenic plate | 1.02e-15 | 24 |
heart rudiment | 1.02e-15 | 24 |
male reproductive organ | 2.51e-15 | 11 |
cardiac chamber | 1.40e-14 | 3 |
valve | 1.60e-14 | 3 |
cardiac mesenchyme | 1.60e-14 | 3 |
cardial valve | 1.60e-14 | 3 |
tunica intima | 1.60e-14 | 3 |
heart layer | 1.60e-14 | 3 |
endocardium | 1.60e-14 | 3 |
endocardial cushion | 1.60e-14 | 3 |
presumptive endocardium | 1.60e-14 | 3 |
primary circulatory organ | 4.53e-14 | 27 |
gonad | 1.59e-08 | 21 |
indifferent external genitalia | 1.59e-08 | 21 |
indifferent gonad | 1.59e-08 | 21 |
gonad primordium | 1.59e-08 | 21 |
external genitalia | 3.51e-08 | 22 |
male organism | 3.51e-08 | 22 |
male reproductive system | 3.51e-08 | 22 |
blood vessel layer | 5.70e-07 | 7 |
primordium | 8.66e-07 | 160 |