FFCP PHASE1:Hg19::chr19:18543503..18543510,+: Difference between revisions
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|id=chr19:18543503..18543510,+
|short_description=p@chr19:18543503..18543510,+
|description=CAGE_peak_at_chr19:18543503..18543510,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:18543503..18543510,+ | |||
|coexpression_cluster_id=C216 | |||
|description=CAGE_peak_at_chr19:18543503..18543510,+ | |||
|id=chr19:18543503..18543510,+ | |||
|ontology_enrichment_celltype=CL:0002588!9.41e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002593;7.14e-26;2!CL:0002595;3.26e-11;5!CL:0002188;3.26e-11;5!CL:1000746;2.18e-08;7!CL:1000612;2.18e-08;7!CL:0000062;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,9.18e-26,2;CL:0002188,2.94e-11,5;CL:0002595,3.60e-11,5;CL:1000746,2.03e-08,7;CL:1000612,2.03e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001851!7.64e-08!16;UBERON:0002113!1.71e-07!27;UBERON:0003918!1.71e-07!27;UBERON:0005095!1.71e-07!27;UBERON:0007687!1.71e-07!27;UBERON:0004905!2.47e-07!5;UBERON:0000982!2.47e-07!5;UBERON:0004770!2.47e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;7.14e-26;2!UBERON:0003834;3.26e-11;5!UBERON:0001533;3.26e-11;5!UBERON:0003513;2.18e-08;7!UBERON:0000074;2.18e-08;7!UBERON:0001229;2.18e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,9.18e-26,2;UBERON:0003834,3.60e-11,5;UBERON:0001533,3.60e-11,5;UBERON:0010532,2.03e-08,7;UBERON:0000074,2.03e-08,7;UBERON:0001229,2.03e-08,7;UBERON:0001230,2.03e-08,7;UBERON:0003220,2.03e-08,7;UBERON:0005749,2.03e-08,7;UBERON:0004199,2.03e-08,7;UBERON:0004209,2.03e-08,7;UBERON:0004198,2.03e-08,7;UBERON:0003513,2.35e-08,7;UBERON:0005103,1.59e-07,8;UBERON:0000083,1.59e-07,8;UBERON:0009201,1.59e-07,8;UBERON:0006553,1.59e-07,8;UBERON:0003074,1.59e-07,8;UBERON:0003060,1.59e-07,8;UBERON:0000080,7.91e-07,9;UBERON:0002120,7.91e-07,9;UBERON:0004875,7.91e-07,9;UBERON:0005721,7.91e-07,9;UBERON:0005754,7.91e-07,9;UBERON:0007297,7.91e-07,9 | |||
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| ||
|short_description=p@chr19:18543503..18543510,+ | |||
}} | }} |
Latest revision as of 05:12, 26 July 2015
Short description: | p@chr19:18543503..18543510, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18543503..18543510, + |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 9.18e-26 | 2 |
glomerular endothelial cell | 2.94e-11 | 5 |
smooth muscle cell of the subclavian artery | 3.60e-11 | 5 |
glomerular cell | 2.03e-08 | 7 |
kidney corpuscule cell | 2.03e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 9.18e-26 | 2 |
thoracic segment blood vessel | 3.60e-11 | 5 |
subclavian artery | 3.60e-11 | 5 |
primitive nephron | 2.03e-08 | 7 |
renal glomerulus | 2.03e-08 | 7 |
renal corpuscle | 2.03e-08 | 7 |
glomerular capsule | 2.03e-08 | 7 |
metanephric mesenchyme | 2.03e-08 | 7 |
glomerular tuft | 2.03e-08 | 7 |
S-shaped body | 2.03e-08 | 7 |
renal vesicle | 2.03e-08 | 7 |
comma-shaped body | 2.03e-08 | 7 |
trunk blood vessel | 2.35e-08 | 7 |
mesonephric epithelium | 1.59e-07 | 8 |
mesonephric tubule | 1.59e-07 | 8 |
nephric duct | 1.59e-07 | 8 |
renal duct | 1.59e-07 | 8 |
mesonephric duct | 1.59e-07 | 8 |
pronephric duct | 1.59e-07 | 8 |
mesonephros | 7.91e-07 | 9 |
pronephros | 7.91e-07 | 9 |
nephrogenic cord | 7.91e-07 | 9 |
pronephric mesoderm | 7.91e-07 | 9 |
rostral part of nephrogenic cord | 7.91e-07 | 9 |
presumptive pronephric mesoderm | 7.91e-07 | 9 |