FFCP PHASE1:Hg19::chr2:233321333..233321358,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:233321333..233321358,+ | |||
|coexpression_cluster_id=C106 | |coexpression_cluster_id=C106 | ||
|description=CAGE_peak_at_chr2:233321333..233321358,+ | |description=CAGE_peak_at_chr2:233321333..233321358,+ | ||
|id=chr2:233321333..233321358,+ | |id=chr2:233321333..233321358,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.80e-45;29!UBERON:0006595;8.98e-09;86 | |||
|ontology_enrichment_disease=DOID:305!2.56e-09!106 | |ontology_enrichment_disease=DOID:305!2.56e-09!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.21e-12,106;DOID:0050687,1.05e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.93e-86!9;UBERON:0001557!3.56e-40!19;UBERON:0008947!4.82e-24!38;UBERON:0003258!4.82e-24!38;UBERON:0004921!4.84e-21!129;UBERON:0004185!4.84e-21!129;UBERON:0000072!1.29e-19!46;UBERON:0001007!4.42e-17!155;UBERON:0001555!4.42e-17!155;UBERON:0007026!4.42e-17!155;UBERON:0000065!7.83e-17!53;UBERON:0004119!1.90e-15!169;UBERON:0000925!1.90e-15!169;UBERON:0006595!1.90e-15!169;UBERON:0000063!2.07e-12!97;UBERON:0005409!4.76e-12!35;UBERON:0001004!5.29e-12!72;UBERON:0000160!1.11e-11!27;UBERON:0001041!3.21e-10!98;UBERON:0000077!9.62e-09!130;UBERON:0000481!5.82e-07!347 | |ontology_enrichment_uberon=UBERON:0001737!5.93e-86!9;UBERON:0001557!3.56e-40!19;UBERON:0008947!4.82e-24!38;UBERON:0003258!4.82e-24!38;UBERON:0004921!4.84e-21!129;UBERON:0004185!4.84e-21!129;UBERON:0000072!1.29e-19!46;UBERON:0001007!4.42e-17!155;UBERON:0001555!4.42e-17!155;UBERON:0007026!4.42e-17!155;UBERON:0000065!7.83e-17!53;UBERON:0004119!1.90e-15!169;UBERON:0000925!1.90e-15!169;UBERON:0006595!1.90e-15!169;UBERON:0000063!2.07e-12!97;UBERON:0005409!4.76e-12!35;UBERON:0001004!5.29e-12!72;UBERON:0000160!1.11e-11!27;UBERON:0001041!3.21e-10!98;UBERON:0000077!9.62e-09!130;UBERON:0000481!5.82e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.31e-147;9!UBERON:0001557;3.31e-147;9!UBERON:0000072;5.41e-33;37!UBERON:0000065;7.74e-28;44!UBERON:0001004;1.44e-14;65!UBERON:0002108;5.72e-14;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.06e-147,9;UBERON:0001557,1.29e-69,19;UBERON:0008947,1.32e-34,38;UBERON:0003258,1.32e-34,38;UBERON:0000072,6.98e-28,47;UBERON:0000065,3.38e-24,54;UBERON:0001004,1.70e-17,74;UBERON:0004921,5.66e-16,118;UBERON:0001041,8.74e-15,87;UBERON:0002108,5.72e-14,4;UBERON:0001007,7.34e-13,145;UBERON:0001555,7.34e-13,145;UBERON:0007026,7.34e-13,145;UBERON:0004119,1.41e-11,160;UBERON:0000925,1.41e-11,160;UBERON:0006595,1.41e-11,160;UBERON:0011216,6.29e-08,223;UBERON:0001048,1.08e-07,160;UBERON:0002114,9.64e-07,2 | |||
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|short_description=p@chr2:233321333..233321358,+ | |short_description=p@chr2:233321333..233321358,+ | ||
}} | }} |
Latest revision as of 07:46, 29 July 2015
Short description: | p@chr2:233321333..233321358, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:233321333..233321358, + |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 3.06e-147 | 9 |
upper respiratory tract | 1.29e-69 | 19 |
respiratory primordium | 1.32e-34 | 38 |
endoderm of foregut | 1.32e-34 | 38 |
segment of respiratory tract | 6.98e-28 | 47 |
respiratory tract | 3.38e-24 | 54 |
respiratory system | 1.70e-17 | 74 |
subdivision of digestive tract | 5.66e-16 | 118 |
foregut | 8.74e-15 | 87 |
small intestine | 5.72e-14 | 4 |
digestive system | 7.34e-13 | 145 |
digestive tract | 7.34e-13 | 145 |
primitive gut | 7.34e-13 | 145 |
endoderm-derived structure | 1.41e-11 | 160 |
endoderm | 1.41e-11 | 160 |
presumptive endoderm | 1.41e-11 | 160 |
organ system subdivision | 6.29e-08 | 223 |
primordium | 1.08e-07 | 160 |
duodenum | 9.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.21e-12 | 106 |
cell type cancer | 1.05e-08 | 143 |