FFCP PHASE1:Hg19::chr2:99388276..99388311,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=231bp_to_ENST00000448595_5end | |association_with_transcript=231bp_to_ENST00000448595_5end | ||
|cluster_id=chr2:99388276..99388311,- | |||
|coexpression_cluster_id=C726 | |coexpression_cluster_id=C726 | ||
|description=CAGE_peak_3_at_ENST00000448595_5end | |description=CAGE_peak_3_at_ENST00000448595_5end | ||
|id=chr2:99388276..99388311,- | |id=chr2:99388276..99388311,- | ||
|ontology_enrichment_celltype=CL:0000791!4.27e-29!18;CL:0000789!4.27e-29!18;CL:0002420!4.27e-29!18;CL:0002419!4.27e-29!18;CL:0000790!4.27e-29!18;CL:0000084!2.13e-27!25;CL:0000827!2.13e-27!25;CL:0000625!7.63e-19!11;CL:0002087!6.50e-16!119;CL:0000738!4.84e-15!140;CL:0000838!1.99e-14!52;CL:0000542!5.20e-14!53;CL:0000051!5.20e-14!53;CL:0000037!1.49e-12!172;CL:0000566!1.49e-12!172;CL:0002031!3.58e-12!124;CL:0000988!4.29e-11!182;CL:0000624!1.35e-10!6;CL:0002032!5.38e-10!165;CL:0000837!5.38e-10!165 | |ontology_enrichment_celltype=CL:0000791!4.27e-29!18;CL:0000789!4.27e-29!18;CL:0002420!4.27e-29!18;CL:0002419!4.27e-29!18;CL:0000790!4.27e-29!18;CL:0000084!2.13e-27!25;CL:0000827!2.13e-27!25;CL:0000625!7.63e-19!11;CL:0002087!6.50e-16!119;CL:0000738!4.84e-15!140;CL:0000838!1.99e-14!52;CL:0000542!5.20e-14!53;CL:0000051!5.20e-14!53;CL:0000037!1.49e-12!172;CL:0000566!1.49e-12!172;CL:0002031!3.58e-12!124;CL:0000988!4.29e-11!182;CL:0000624!1.35e-10!6;CL:0002032!5.38e-10!165;CL:0000837!5.38e-10!165 | ||
|ontology_enrichment_celltype_v019=CL:0000084;3.20e-34;25!CL:0000791;7.49e-30;18!CL:0000789;7.49e-30;18!CL:0002419;7.49e-30;18!CL:0000625;6.46e-27;11!CL:0002619;1.95e-15;3!CL:0000542;4.40e-08;53!CL:0000624;1.77e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.99e-34,25;CL:0000827,1.99e-34,25;CL:0000791,4.26e-30,18;CL:0000789,4.26e-30,18;CL:0002420,4.26e-30,18;CL:0002419,4.26e-30,18;CL:0000790,4.26e-30,18;CL:0000625,4.08e-27,11;CL:0002619,2.67e-15,3;CL:0000838,6.23e-15,52;CL:0000542,1.36e-14,53;CL:0000051,1.36e-14,53;CL:0002087,9.97e-12,115;CL:0000738,1.85e-10,136;CL:0002031,7.58e-10,120;CL:0000037,1.37e-08,168;CL:0000988,6.50e-08,177;CL:0000624,1.53e-07,6;CL:0002032,3.20e-07,161;CL:0000837,3.20e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;7.49e-30;18!CL:0000051;4.40e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.08e-20!115;UBERON:0002308!8.82e-12!9;UBERON:0000125!8.82e-12!9;UBERON:0001049!1.33e-11!57;UBERON:0005068!1.33e-11!57;UBERON:0006241!1.33e-11!57;UBERON:0007135!1.33e-11!57;UBERON:0009663!1.38e-09!7;UBERON:0000178!1.83e-09!15;UBERON:0000179!1.83e-09!15;UBERON:0000463!1.83e-09!15;UBERON:0002420!2.17e-09!9;UBERON:0007245!2.17e-09!9;UBERON:0010009!2.17e-09!9;UBERON:0010011!2.17e-09!9;UBERON:0000454!2.17e-09!9;UBERON:0002616!5.15e-09!59;UBERON:0002020!1.04e-08!34;UBERON:0003528!1.04e-08!34;UBERON:0002780!2.11e-08!41;UBERON:0001890!2.11e-08!41;UBERON:0006240!2.11e-08!41;UBERON:0002390!2.83e-08!102;UBERON:0003061!2.83e-08!102;UBERON:0002193!3.64e-08!112;UBERON:0003080!4.26e-08!42;UBERON:0001017!5.81e-08!82;UBERON:0002791!7.11e-08!33;UBERON:0002370!1.19e-07!4;UBERON:0005058!1.19e-07!4;UBERON:0009113!1.19e-07!4;UBERON:0003295!1.19e-07!4;UBERON:0005562!1.19e-07!4;UBERON:0001893!1.54e-07!34;UBERON:0000955!2.19e-07!69;UBERON:0006238!2.19e-07!69;UBERON:0005743!2.80e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!4.08e-20!115;UBERON:0002308!8.82e-12!9;UBERON:0000125!8.82e-12!9;UBERON:0001049!1.33e-11!57;UBERON:0005068!1.33e-11!57;UBERON:0006241!1.33e-11!57;UBERON:0007135!1.33e-11!57;UBERON:0009663!1.38e-09!7;UBERON:0000178!1.83e-09!15;UBERON:0000179!1.83e-09!15;UBERON:0000463!1.83e-09!15;UBERON:0002420!2.17e-09!9;UBERON:0007245!2.17e-09!9;UBERON:0010009!2.17e-09!9;UBERON:0010011!2.17e-09!9;UBERON:0000454!2.17e-09!9;UBERON:0002616!5.15e-09!59;UBERON:0002020!1.04e-08!34;UBERON:0003528!1.04e-08!34;UBERON:0002780!2.11e-08!41;UBERON:0001890!2.11e-08!41;UBERON:0006240!2.11e-08!41;UBERON:0002390!2.83e-08!102;UBERON:0003061!2.83e-08!102;UBERON:0002193!3.64e-08!112;UBERON:0003080!4.26e-08!42;UBERON:0001017!5.81e-08!82;UBERON:0002791!7.11e-08!33;UBERON:0002370!1.19e-07!4;UBERON:0005058!1.19e-07!4;UBERON:0009113!1.19e-07!4;UBERON:0003295!1.19e-07!4;UBERON:0005562!1.19e-07!4;UBERON:0001893!1.54e-07!34;UBERON:0000955!2.19e-07!69;UBERON:0006238!2.19e-07!69;UBERON:0005743!2.80e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.92e-10;2!UBERON:0005058;3.92e-10;2!UBERON:0009113;3.92e-10;2!UBERON:0000178;2.72e-07;15!UBERON:0000179;2.72e-07;15!UBERON:0000463;2.72e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.48e-11,4;UBERON:0005058,4.48e-11,4;UBERON:0009113,4.48e-11,4;UBERON:0003295,4.48e-11,4;UBERON:0005562,4.48e-11,4;UBERON:0003351,1.57e-07,6;UBERON:0000178,2.68e-07,15;UBERON:0000179,2.68e-07,15;UBERON:0000463,2.68e-07,15 | |||
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|short_description=p3@ENST00000448595 | |short_description=p3@ENST00000448595 | ||
}} | }} |
Latest revision as of 13:32, 29 July 2015
Short description: | p3@ENST00000448595 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000448595_5end |
Coexpression cluster: | C726_chronic_CD4_Hodgkin_CD8_thymus_CD19_blood |
Association with transcript: | 231bp_to_ENST00000448595_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.99e-34 | 25 |
pro-T cell | 1.99e-34 | 25 |
mature alpha-beta T cell | 4.26e-30 | 18 |
alpha-beta T cell | 4.26e-30 | 18 |
immature T cell | 4.26e-30 | 18 |
mature T cell | 4.26e-30 | 18 |
immature alpha-beta T cell | 4.26e-30 | 18 |
CD8-positive, alpha-beta T cell | 4.08e-27 | 11 |
adult endothelial progenitor cell | 2.67e-15 | 3 |
lymphoid lineage restricted progenitor cell | 6.23e-15 | 52 |
lymphocyte | 1.36e-14 | 53 |
common lymphoid progenitor | 1.36e-14 | 53 |
nongranular leukocyte | 9.97e-12 | 115 |
leukocyte | 1.85e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 7.58e-10 | 120 |
hematopoietic stem cell | 1.37e-08 | 168 |
hematopoietic cell | 6.50e-08 | 177 |
CD4-positive, alpha-beta T cell | 1.53e-07 | 6 |
hematopoietic oligopotent progenitor cell | 3.20e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.20e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.48e-11 | 4 |
hemolymphoid system gland | 4.48e-11 | 4 |
thymic region | 4.48e-11 | 4 |
pharyngeal gland | 4.48e-11 | 4 |
thymus primordium | 4.48e-11 | 4 |
pharyngeal epithelium | 1.57e-07 | 6 |
blood | 2.68e-07 | 15 |
haemolymphatic fluid | 2.68e-07 | 15 |
organism substance | 2.68e-07 | 15 |