FFCP PHASE1:Hg19::chr3:195943398..195943417,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200931 | |EntrezGene=200931 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=F8WBV2 | |UniProt=F8WBV2 | ||
|association_with_transcript=0bp_to_ENST00000442203,ENST00000472653_5end | |association_with_transcript=0bp_to_ENST00000442203,ENST00000472653_5end | ||
|cluster_id=chr3:195943398..195943417,+ | |||
|coexpression_cluster_id=C211 | |coexpression_cluster_id=C211 | ||
|description=CAGE_peak_1_at_OSTalpha_5end | |description=CAGE_peak_1_at_OSTalpha_5end | ||
|id=chr3:195943398..195943417,+ | |id=chr3:195943398..195943417,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.43e-13!5;CL:0000181!1.22e-08!12;CL:0000417!1.22e-08!12;CL:0000668!1.22e-08!12;CL:0000414!1.22e-08!12;CL:0000412!1.22e-08!12;CL:0000182!1.22e-08!12 | |ontology_enrichment_celltype=CL:0002322!1.43e-13!5;CL:0000181!1.22e-08!12;CL:0000417!1.22e-08!12;CL:0000668!1.22e-08!12;CL:0000414!1.22e-08!12;CL:0000412!1.22e-08!12;CL:0000182!1.22e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.26e-20;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.18e-20,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.28e-15;11!UBERON:0009497;3.41e-13;13!UBERON:0000358;3.57e-08;1!UBERON:0001045;3.57e-08;1!UBERON:0001041;9.16e-08;30!UBERON:0003104;1.52e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;1.52e-08;1!DOID:1357;1.52e-08;1!DOID:178;3.57e-08;1!DOID:326;3.57e-08;1!DOID:3978;3.57e-08;1!DOID:3394;3.57e-08;1!DOID:5844;3.57e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.52e-08,1;DOID:1357,1.52e-08,1;DOID:178,4.11e-08,1;DOID:326,4.11e-08,1;DOID:3978,4.11e-08,1;DOID:3394,4.11e-08,1;DOID:5844,4.11e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001007!4.68e-14!155;UBERON:0001555!4.68e-14!155;UBERON:0007026!4.68e-14!155;UBERON:0004921!7.71e-13!129;UBERON:0004185!7.71e-13!129;UBERON:0003929!1.63e-12!54;UBERON:0004119!3.79e-12!169;UBERON:0000925!3.79e-12!169;UBERON:0006595!3.79e-12!169;UBERON:0009497!3.83e-12!25;UBERON:0000015!3.83e-12!25;UBERON:0002423!3.83e-12!25;UBERON:0006235!3.83e-12!25;UBERON:0004161!3.83e-12!25;UBERON:0000059!3.88e-12!11;UBERON:0005057!3.33e-11!26;UBERON:0005409!1.35e-10!35;UBERON:0000160!2.02e-10!27;UBERON:0005911!9.89e-10!82;UBERON:0002368!2.53e-09!35;UBERON:0004907!2.94e-09!5;UBERON:0009854!3.37e-09!23;UBERON:0002107!4.06e-09!19;UBERON:0006925!4.06e-09!19;UBERON:0008836!4.06e-09!19;UBERON:0002110!7.87e-09!3;UBERON:0006242!7.87e-09!3;UBERON:0005172!2.69e-08!55;UBERON:0005173!2.69e-08!55;UBERON:0003135!3.03e-08!11;UBERON:0001155!5.41e-08!9;UBERON:0009856!6.38e-08!26;UBERON:0000077!7.68e-08!130;UBERON:0008835!1.15e-07!22;UBERON:0003894!1.15e-07!22;UBERON:0002417!3.84e-07!61;UBERON:0000916!3.84e-07!61;UBERON:0001052!9.67e-07!4 | |ontology_enrichment_uberon=UBERON:0001007!4.68e-14!155;UBERON:0001555!4.68e-14!155;UBERON:0007026!4.68e-14!155;UBERON:0004921!7.71e-13!129;UBERON:0004185!7.71e-13!129;UBERON:0003929!1.63e-12!54;UBERON:0004119!3.79e-12!169;UBERON:0000925!3.79e-12!169;UBERON:0006595!3.79e-12!169;UBERON:0009497!3.83e-12!25;UBERON:0000015!3.83e-12!25;UBERON:0002423!3.83e-12!25;UBERON:0006235!3.83e-12!25;UBERON:0004161!3.83e-12!25;UBERON:0000059!3.88e-12!11;UBERON:0005057!3.33e-11!26;UBERON:0005409!1.35e-10!35;UBERON:0000160!2.02e-10!27;UBERON:0005911!9.89e-10!82;UBERON:0002368!2.53e-09!35;UBERON:0004907!2.94e-09!5;UBERON:0009854!3.37e-09!23;UBERON:0002107!4.06e-09!19;UBERON:0006925!4.06e-09!19;UBERON:0008836!4.06e-09!19;UBERON:0002110!7.87e-09!3;UBERON:0006242!7.87e-09!3;UBERON:0005172!2.69e-08!55;UBERON:0005173!2.69e-08!55;UBERON:0003135!3.03e-08!11;UBERON:0001155!5.41e-08!9;UBERON:0009856!6.38e-08!26;UBERON:0000077!7.68e-08!130;UBERON:0008835!1.15e-07!22;UBERON:0003894!1.15e-07!22;UBERON:0002417!3.84e-07!61;UBERON:0000916!3.84e-07!61;UBERON:0001052!9.67e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.52e-22;19!UBERON:0006925;1.52e-22;19!UBERON:0002423;2.69e-21;25!UBERON:0000160;2.71e-18;17!UBERON:0005409;3.85e-14;22!UBERON:0002108;1.91e-13;4!UBERON:0002365;6.34e-13;31!UBERON:0002330;6.34e-13;31!UBERON:0002368;2.12e-11;33!UBERON:0001007;1.06e-10;81!UBERON:0000059;2.64e-10;11!UBERON:0004921;8.81e-09;33!UBERON:0001764;1.52e-08;1!UBERON:0001825;1.52e-08;1!UBERON:0000949;2.14e-08;43!UBERON:0001154;3.57e-08;1!UBERON:0001153;3.57e-08;1!UBERON:0009854;3.57e-08;1!UBERON:0001301;5.62e-08;1!UBERON:0005172;7.22e-08;52!UBERON:0005173;7.22e-08;52!UBERON:0001155;1.37e-07;9!UBERON:0002417;7.34e-07;58!UBERON:0000916;7.34e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.90e-23,23;UBERON:0002107,1.47e-22,19;UBERON:0006925,1.47e-22,19;UBERON:0008836,1.47e-22,19;UBERON:0009497,2.59e-21,25;UBERON:0000015,2.59e-21,25;UBERON:0002423,2.59e-21,25;UBERON:0006235,2.59e-21,25;UBERON:0004161,2.59e-21,25;UBERON:0009856,2.03e-20,26;UBERON:0008835,2.48e-19,22;UBERON:0003894,2.48e-19,22;UBERON:0000160,2.35e-18,17;UBERON:0007499,7.03e-17,25;UBERON:0004921,1.90e-15,118;UBERON:0005172,1.42e-13,54;UBERON:0005173,1.42e-13,54;UBERON:0001007,1.60e-13,145;UBERON:0001555,1.60e-13,145;UBERON:0007026,1.60e-13,145;UBERON:0002108,1.91e-13,4;UBERON:0002365,2.14e-13,31;UBERON:0002330,2.14e-13,31;UBERON:0005409,1.86e-12,25;UBERON:0002417,5.07e-12,60;UBERON:0000916,5.07e-12,60;UBERON:0004119,6.45e-12,160;UBERON:0000925,6.45e-12,160;UBERON:0006595,6.45e-12,160;UBERON:0002368,9.81e-12,35;UBERON:0003929,2.97e-11,54;UBERON:0000059,2.31e-10,11;UBERON:0005177,4.35e-09,101;UBERON:0000949,7.10e-09,45;UBERON:0001764,1.52e-08,1;UBERON:0001825,1.52e-08,1;UBERON:0005911,2.66e-08,82;UBERON:0001154,3.10e-08,1;UBERON:0001153,3.10e-08,1;UBERON:0001045,3.10e-08,1;UBERON:0002530,3.35e-08,59;UBERON:0009569,5.82e-08,112;UBERON:0001301,5.82e-08,1;UBERON:0001155,1.31e-07,9;UBERON:0011216,2.23e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.530119073285941,0.580969714347592,0.725627385107593,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.7589600983309,6.87979051674338,20.0868568271677,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7348646656243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,15.7220147297221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.398495976502139,2.76283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,11.6763985144408,18.3309043480088,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0.677942222341597,0,0,0.0633107959558787,3.71547627196126,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,2.1964690054889,0,0,0,0,0,1.6544468284517,1.7307330260045,2.29172049104229,0,0,0,0,0.964518890790115,0.687697182986169,0,0,0,0,0,0.709251365692784,1.41627387964495,0,0,0,0,0,0,0,0,0,0,0,0,0,35.612192783774,27.8264466715665,0,0,0,1.40963004463334,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,16.4906801062746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,2.33585943973345,0,0,0.560544326627578,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,43.1403543823411,5.68254857310289,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0.730336388246517,0,0,0,0,0,5.290268405154,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0.18378979906969,0,0.530450887527676,0,0,0,0.639701945702943,0,0.129177819672012,0.0620747142958579,0,0.25458863311266,0.808468755832877,0,0,0.0673520530145875,3.22749924267044,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.530119073285941,0.580969714347592,0.725627385107593,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.7589600983309,6.87979051674338,20.0868568271677,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7348646656243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,15.7220147297221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.398495976502139,2.76283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,11.6763985144408,18.3309043480088,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0.677942222341597,0,0,0.0633107959558787,3.71547627196126,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,2.1964690054889,0,0,0,0,0,1.6544468284517,1.7307330260045,2.29172049104229,0,0,0,0,0.964518890790115,0.687697182986169,0,0,0,0,0,0.709251365692784,1.41627387964495,0,0,0,0,0,0,0,0,0,0,0,0,0,35.612192783774,27.8264466715665,0,0,0,1.40963004463334,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,16.4906801062746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,2.33585943973345,0,0,0.560544326627578,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,43.1403543823411,5.68254857310289,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0.730336388246517,0,0,0,0,0,5.290268405154,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0.18378979906969,0,0.530450887527676,0,0,0,0.639701945702943,0,0.129177819672012,0.0620747142958579,0,0.25458863311266,0.808468755832877,0,0,0.0673520530145875,3.22749924267044,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p1@OSTalpha | |short_description=p1@OSTalpha | ||
}} | }} |
Latest revision as of 15:11, 17 September 2015
Short description: | p1@OSTalpha |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OSTalpha_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 0bp_to_ENST00000442203, ENST00000472653_5end |
EntrezGene: | OSTalpha |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.18e-20 | 12 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.52e-08 | 1 |
maxillary sinus cancer | 1.52e-08 | 1 |
vascular disease | 4.11e-08 | 1 |
ischemia | 4.11e-08 | 1 |
extrinsic cardiomyopathy | 4.11e-08 | 1 |
myocardial ischemia | 4.11e-08 | 1 |
myocardial infarction | 4.11e-08 | 1 |