FFCP PHASE1:Hg19::chr3:48514924..48514935,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51246 | |EntrezGene=51246 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30376 | |HGNC=30376 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000465449,uc011bbk.1_5end | |association_with_transcript=5bp_to_ENST00000465449,uc011bbk.1_5end | ||
|cluster_id=chr3:48514924..48514935,- | |||
|coexpression_cluster_id=C304 | |coexpression_cluster_id=C304 | ||
|description=CAGE_peak_14_at_SHISA5_5end | |description=CAGE_peak_14_at_SHISA5_5end | ||
|id=chr3:48514924..48514935,- | |id=chr3:48514924..48514935,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.90e-27;12!CL:0002563;7.15e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.99e-27,12;CL:0000223,1.81e-11,58;CL:0002563,8.56e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.86e-30;11!UBERON:0009497;3.42e-25;13!UBERON:0003104;6.08e-14;31!UBERON:0001041;1.10e-10;30!CL:0000223;3.26e-07;58 | |||
|ontology_enrichment_disease=DOID:305!4.94e-09!106;DOID:0050687!2.93e-08!143 | |ontology_enrichment_disease=DOID:305!4.94e-09!106;DOID:0050687!2.93e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.38e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0005409!4.73e-07!35 | |ontology_enrichment_uberon=UBERON:0005409!4.73e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.73e-30;19!UBERON:0006925;4.73e-30;19!UBERON:0002423;1.28e-22;25!UBERON:0005409;2.23e-18;22!UBERON:0000160;1.55e-17;17!UBERON:0002365;2.11e-17;31!UBERON:0002330;2.11e-17;31!UBERON:0002368;4.83e-15;33!UBERON:0001007;1.33e-12;81!UBERON:0004921;1.52e-11;33!UBERON:0000949;8.52e-11;43!UBERON:0001242;7.15e-10;4!UBERON:0001262;7.15e-10;4!UBERON:0004786;7.15e-10;4!UBERON:0004808;7.15e-10;4!UBERON:0001277;7.15e-10;4!UBERON:0001155;1.71e-09;9!UBERON:0005172;5.98e-09;52!UBERON:0005173;5.98e-09;52!UBERON:0002108;2.99e-08;4!UBERON:0002417;5.64e-08;58!UBERON:0000916;5.64e-08;58!UBERON:0000059;7.37e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.56e-30,19;UBERON:0006925,4.56e-30,19;UBERON:0008836,4.56e-30,19;UBERON:0008835,7.64e-26,22;UBERON:0003894,7.64e-26,22;UBERON:0009854,1.11e-24,23;UBERON:0007499,1.25e-22,25;UBERON:0009497,1.25e-22,25;UBERON:0000015,1.25e-22,25;UBERON:0002423,1.25e-22,25;UBERON:0006235,1.25e-22,25;UBERON:0004161,1.25e-22,25;UBERON:0009856,1.01e-21,26;UBERON:0002365,4.58e-18,31;UBERON:0002330,4.58e-18,31;UBERON:0000160,1.67e-17,17;UBERON:0005409,4.25e-16,25;UBERON:0002368,6.87e-16,35;UBERON:0003929,1.97e-15,54;UBERON:0004921,1.13e-14,118;UBERON:0001007,2.88e-13,145;UBERON:0001555,2.88e-13,145;UBERON:0007026,2.88e-13,145;UBERON:0005172,1.47e-12,54;UBERON:0005173,1.47e-12,54;UBERON:0000949,3.89e-12,45;UBERON:0004119,8.80e-12,160;UBERON:0000925,8.80e-12,160;UBERON:0006595,8.80e-12,160;UBERON:0002417,3.54e-11,60;UBERON:0000916,3.54e-11,60;UBERON:0001242,8.56e-10,4;UBERON:0001262,8.56e-10,4;UBERON:0004786,8.56e-10,4;UBERON:0004808,8.56e-10,4;UBERON:0001277,8.56e-10,4;UBERON:0005911,1.19e-09,82;UBERON:0001155,1.73e-09,9;UBERON:0002530,5.15e-09,59;UBERON:0002108,2.94e-08,4;UBERON:0000059,7.47e-08,11;UBERON:0011216,1.34e-07,223;UBERON:0001041,2.83e-07,87 | |||
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| ||
|short_description=p14@SHISA5 | |short_description=p14@SHISA5 | ||
}} | }} |
Latest revision as of 14:16, 18 September 2015
Short description: | p14@SHISA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SHISA5_5end |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | 5bp_to_ENST00000465449, uc011bbk.1_5end |
EntrezGene: | SHISA5 |
HGNC: | 30376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.99e-27 | 12 |
endodermal cell | 1.81e-11 | 58 |
intestinal epithelial cell | 8.56e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.38e-07 | 106 |