FFCP PHASE1:Hg19::chr3:99542688..99542701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_AB593151_5end | |association_with_transcript=7bp_to_AB593151_5end | ||
|cluster_id=chr3:99542688..99542701,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_1_at_AB593151_5end | |description=CAGE_peak_1_at_AB593151_5end | ||
|id=chr3:99542688..99542701,- | |id=chr3:99542688..99542701,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000243;1.37e-16;15!CL:0000125;1.37e-16;15!CL:0000095;5.66e-15;17!CL:0000138;2.19e-12;6!CL:0002319;6.90e-11;25!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.37e-16,15;CL:0000125,1.37e-16,15;CL:0000030,1.37e-16,15;CL:0000339,1.37e-16,15;CL:0000095,5.66e-15,17;CL:0000123,5.66e-15,17;CL:0000058,2.19e-12,6;CL:0000138,2.19e-12,6;CL:0002319,6.90e-11,25;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9;CL:0000333,3.05e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006238;6.20e-25;10!UBERON:0003056;4.09e-23;3!CL:0000339;1.37e-16;15 | |||
|ontology_enrichment_disease=DOID:3371!2.63e-12!1;DOID:4549!2.63e-12!1;DOID:5861!2.63e-12!1;DOID:6496!2.63e-12!1 | |ontology_enrichment_disease=DOID:3371!2.63e-12!1;DOID:4549!2.63e-12!1;DOID:5861!2.63e-12!1;DOID:6496!2.63e-12!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:3093;5.74e-23;11!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.23e-66,1;DOID:4549,1.23e-66,1;DOID:5861,1.23e-66,1;DOID:6496,1.23e-66,1;DOID:3093,5.74e-23,11;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001896!1.51e-14!3;UBERON:0005290!1.51e-14!3;UBERON:0010096!1.51e-14!3;UBERON:0005418!3.65e-12!1;UBERON:0001389!3.65e-12!1;UBERON:0000026!3.65e-12!1;UBERON:0008784!3.65e-12!1;UBERON:0006058!3.65e-12!1;UBERON:0003663!3.65e-12!1;UBERON:0001383!3.65e-12!1;UBERON:0004256!3.65e-12!1;UBERON:0002529!3.65e-12!1;UBERON:0004708!3.65e-12!1;UBERON:0002101!3.65e-12!1;UBERON:0004709!3.65e-12!1;UBERON:0003661!3.65e-12!1;UBERON:0002471!3.65e-12!1;UBERON:0004357!3.65e-12!1;UBERON:0009872!3.65e-12!1;UBERON:0004347!3.65e-12!1;UBERON:0005420!3.65e-12!1;UBERON:0005732!3.65e-12!1;UBERON:0006057!3.65e-12!1;UBERON:0000978!3.65e-12!1;UBERON:0002103!3.65e-12!1;UBERON:0001665!3.65e-12!1;UBERON:0003823!3.65e-12!1;UBERON:0000154!3.65e-12!1;UBERON:0005733!3.65e-12!1;UBERON:0005730!3.65e-12!1;UBERON:0002298!4.77e-12!8;UBERON:0003076!3.04e-11!15;UBERON:0003057!3.04e-11!15;UBERON:0004733!3.26e-08!12;UBERON:0002028!3.26e-08!12;UBERON:0007277!3.26e-08!12;UBERON:0004732!1.28e-07!13 | |ontology_enrichment_uberon=UBERON:0001896!1.51e-14!3;UBERON:0005290!1.51e-14!3;UBERON:0010096!1.51e-14!3;UBERON:0005418!3.65e-12!1;UBERON:0001389!3.65e-12!1;UBERON:0000026!3.65e-12!1;UBERON:0008784!3.65e-12!1;UBERON:0006058!3.65e-12!1;UBERON:0003663!3.65e-12!1;UBERON:0001383!3.65e-12!1;UBERON:0004256!3.65e-12!1;UBERON:0002529!3.65e-12!1;UBERON:0004708!3.65e-12!1;UBERON:0002101!3.65e-12!1;UBERON:0004709!3.65e-12!1;UBERON:0003661!3.65e-12!1;UBERON:0002471!3.65e-12!1;UBERON:0004357!3.65e-12!1;UBERON:0009872!3.65e-12!1;UBERON:0004347!3.65e-12!1;UBERON:0005420!3.65e-12!1;UBERON:0005732!3.65e-12!1;UBERON:0006057!3.65e-12!1;UBERON:0000978!3.65e-12!1;UBERON:0002103!3.65e-12!1;UBERON:0001665!3.65e-12!1;UBERON:0003823!3.65e-12!1;UBERON:0000154!3.65e-12!1;UBERON:0005733!3.65e-12!1;UBERON:0005730!3.65e-12!1;UBERON:0002298!4.77e-12!8;UBERON:0003076!3.04e-11!15;UBERON:0003057!3.04e-11!15;UBERON:0004733!3.26e-08!12;UBERON:0002028!3.26e-08!12;UBERON:0007277!3.26e-08!12;UBERON:0004732!1.28e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3!UBERON:0000966;1.83e-14;5!UBERON:0005388;1.83e-14;5!UBERON:0001802;1.83e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,2.62e-23,3;UBERON:0004755,2.62e-23,3;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6 | |||
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|short_description=p1@AB593151 | |short_description=p1@AB593151 | ||
}} | }} |
Latest revision as of 00:12, 30 July 2015
Short description: | p1@AB593151 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB593151_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 7bp_to_AB593151_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.37e-16 | 15 |
glial cell | 1.37e-16 | 15 |
glioblast | 1.37e-16 | 15 |
glioblast (sensu Vertebrata) | 1.37e-16 | 15 |
neuron associated cell | 5.66e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 5.66e-15 | 17 |
chondroblast | 2.19e-12 | 6 |
chondrocyte | 2.19e-12 | 6 |
neural cell | 6.90e-11 | 25 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |
migratory neural crest cell | 3.05e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 2.62e-23 | 3 |
skeletal tissue | 2.62e-23 | 3 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.23e-66 | 1 |
extraosseous chondrosarcoma | 1.23e-66 | 1 |
myxoid chondrosarcoma | 1.23e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 1.23e-66 | 1 |
nervous system cancer | 5.74e-23 | 11 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |