FFCP PHASE1:Hg19::chr4:129491457..129491467,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=131bp_to_uc003igi.1_5end | |association_with_transcript=131bp_to_uc003igi.1_5end | ||
|cluster_id=chr4:129491457..129491467,- | |||
|coexpression_cluster_id=C54 | |coexpression_cluster_id=C54 | ||
|description=CAGE_peak_2_at_uc003igi.1_5end | |description=CAGE_peak_2_at_uc003igi.1_5end | ||
|id=chr4:129491457..129491467,- | |id=chr4:129491457..129491467,- | ||
|ontology_enrichment_celltype=CL:0002334!4.59e-13!12;CL:0000188!5.17e-12!9;CL:0002570!2.32e-10!8;CL:0000594!5.03e-10!3;CL:0002617!6.79e-08!2;CL:0000048!5.56e-07!430;CL:0000723!9.77e-07!436 | |ontology_enrichment_celltype=CL:0002334!4.59e-13!12;CL:0000188!5.17e-12!9;CL:0002570!2.32e-10!8;CL:0000594!5.03e-10!3;CL:0002617!6.79e-08!2;CL:0000048!5.56e-07!430;CL:0000723!9.77e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000840;8.52e-26;5!CL:0002616;9.49e-18;1!CL:0000990;1.92e-17;8!CL:0000451;2.15e-14;10!CL:0002617;1.86e-09;2!CL:0002570;3.94e-09;8!CL:0000515;7.08e-07;3!CL:0002573;7.92e-07;2!CL:0002580;7.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,7.84e-26,5;CL:0001029,7.84e-26,5;CL:0002616,1.03e-17,1;CL:0000990,1.82e-17,8;CL:0000451,2.05e-14,10;CL:0002617,1.71e-09,2;CL:0002570,3.86e-09,8;CL:0002573,7.70e-07,2;CL:0002580,8.15e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1192;8.50e-23;3!DOID:3371;2.90e-18;1!DOID:4549;2.90e-18;1!DOID:5861;2.90e-18;1!DOID:6496;2.90e-18;1!DOID:3369;1.44e-17;1!DOID:3193;1.27e-09;2!DOID:962;1.27e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,8.99e-23,3;DOID:3371,3.16e-18,1;DOID:4549,3.16e-18,1;DOID:5861,3.16e-18,1;DOID:6496,3.16e-18,1;DOID:3369,1.70e-17,1;DOID:3193,1.22e-09,2;DOID:962,1.22e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001013!4.93e-11!14 | |ontology_enrichment_uberon=UBERON:0001013!4.93e-11!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.73e-11;14!UBERON:0005406;1.51e-09;2!UBERON:0000310;1.65e-07;10!UBERON:0002418;5.97e-07;3!UBERON:0004755;5.97e-07;3!UBERON:0001443;6.64e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,3.73e-11,14;UBERON:0005406,1.57e-09,2;UBERON:0000310,1.62e-07,10;UBERON:0002418,6.14e-07,3;UBERON:0004755,6.14e-07,3;UBERON:0001443,6.54e-07,11 | |||
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|phase1_expression=1.63510541343501,0.428201047781966,0.422863212287913,0,0,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,5.8418530857843,7.66170844116776,10.1048049994338,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,0.264818361626438,0,0,0,0,0,0,0.404132016209064,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.936017060556951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,1.62868092146868,0,0,0,0,0,0,0,0,0,0,0,5.35690834670043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47350930946288,0,0.561320188866147,0.896974044789907,0.511707249066704,0,0,0,0.710246901252508,0.328508624055237,0,0.464841513839837,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.275673144969061,0.537101224341368,0.145016693914229,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,10.061198442831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.701139929541673,2.77402930751307,0.189403005275089,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4980478571876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@uc003igi.1 | |short_description=p2@uc003igi.1 | ||
}} | }} |
Latest revision as of 01:32, 30 July 2015
Short description: | p2@uc003igi.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc003igi.1_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 131bp_to_uc003igi.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 7.84e-26 | 5 |
common dendritic progenitor | 7.84e-26 | 5 |
perirenal adipocyte cell | 1.03e-17 | 1 |
conventional dendritic cell | 1.82e-17 | 8 |
dendritic cell | 2.05e-14 | 10 |
adipocyte of breast | 1.71e-09 | 2 |
mesenchymal stem cell of adipose | 3.86e-09 | 8 |
Schwann cell | 7.70e-07 | 2 |
preadipocyte of the breast | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 3.73e-11 | 14 |
perirenal fat | 1.57e-09 | 2 |
breast | 1.62e-07 | 10 |
cartilage tissue | 6.14e-07 | 3 |
skeletal tissue | 6.14e-07 | 3 |
chest | 6.54e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 8.99e-23 | 3 |
chondrosarcoma | 3.16e-18 | 1 |
extraosseous chondrosarcoma | 3.16e-18 | 1 |
myxoid chondrosarcoma | 3.16e-18 | 1 |
extraskeletal myxoid chondrosarcoma | 3.16e-18 | 1 |
peripheral primitive neuroectodermal tumor | 1.70e-17 | 1 |
peripheral nerve sheath neoplasm | 1.22e-09 | 2 |
neurofibroma | 1.22e-09 | 2 |