FFCP PHASE1:Hg19::chr4:14507912..14507929,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42132 | |HGNC=42132 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=174bp_to_ENST00000512602_5end | |association_with_transcript=174bp_to_ENST00000512602_5end | ||
|cluster_id=chr4:14507912..14507929,- | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_1_at_MTND2P31_5end | |description=CAGE_peak_1_at_MTND2P31_5end | ||
|id=chr4:14507912..14507929,- | |id=chr4:14507912..14507929,- | ||
|ontology_enrichment_celltype=CL:0002588!3.65e-11!2;CL:0000322!6.43e-08!3;CL:0000181!1.37e-07!12;CL:0000417!1.37e-07!12;CL:0000668!1.37e-07!12;CL:0000414!1.37e-07!12;CL:0000412!1.37e-07!12;CL:0000182!1.37e-07!12 | |ontology_enrichment_celltype=CL:0002588!3.65e-11!2;CL:0000322!6.43e-08!3;CL:0000181!1.37e-07!12;CL:0000417!1.37e-07!12;CL:0000668!1.37e-07!12;CL:0000414!1.37e-07!12;CL:0000412!1.37e-07!12;CL:0000182!1.37e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.72e-33;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.58e-33,12;CL:0000223,2.63e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.79e-21;11!UBERON:0001041;5.95e-21;30!UBERON:0009497;5.11e-18;13!UBERON:0003104;8.43e-08;31 | |||
|ontology_enrichment_disease=DOID:3910!1.85e-11!2;DOID:3908!3.42e-10!5;DOID:3905!9.60e-10!9;DOID:1325!2.26e-07!7;DOID:3904!2.26e-07!7;DOID:6193!8.21e-07!1 | |ontology_enrichment_disease=DOID:3910!1.85e-11!2;DOID:3908!3.42e-10!5;DOID:3905!9.60e-10!9;DOID:1325!2.26e-07!7;DOID:3904!2.26e-07!7;DOID:6193!8.21e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:6193;9.79e-26;1!DOID:3350;1.37e-13;2!DOID:3905;5.99e-12;9!DOID:4556;1.35e-09;3!DOID:1324;1.52e-07;15!DOID:5409;1.92e-07;4!DOID:0050615;3.96e-07;16!DOID:7;9.05e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.26e-25,1;DOID:3350,1.55e-13,2;DOID:3905,5.83e-12,9;DOID:4556,1.30e-09,3;DOID:1324,1.49e-07,15;DOID:5409,1.92e-07,4;DOID:0050615,3.90e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004903!1.85e-11!2;UBERON:0002173!1.85e-11!2;UBERON:0002186!1.85e-11!2;UBERON:0002066!9.73e-10!5;UBERON:0007499!1.14e-09!25;UBERON:0009856!2.91e-09!26;UBERON:0004821!6.43e-08!3;UBERON:0003215!6.43e-08!3;UBERON:0002299!6.43e-08!3;UBERON:0006524!6.43e-08!3;UBERON:0008874!6.43e-08!3;UBERON:0002169!6.43e-08!3;UBERON:0004894!6.43e-08!3;UBERON:0002107!5.80e-07!19;UBERON:0006925!5.80e-07!19;UBERON:0008836!5.80e-07!19 | |ontology_enrichment_uberon=UBERON:0004903!1.85e-11!2;UBERON:0002173!1.85e-11!2;UBERON:0002186!1.85e-11!2;UBERON:0002066!9.73e-10!5;UBERON:0007499!1.14e-09!25;UBERON:0009856!2.91e-09!26;UBERON:0004821!6.43e-08!3;UBERON:0003215!6.43e-08!3;UBERON:0002299!6.43e-08!3;UBERON:0006524!6.43e-08!3;UBERON:0008874!6.43e-08!3;UBERON:0002169!6.43e-08!3;UBERON:0004894!6.43e-08!3;UBERON:0002107!5.80e-07!19;UBERON:0006925!5.80e-07!19;UBERON:0008836!5.80e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.20e-21;19!UBERON:0006925;2.20e-21;19!UBERON:0002423;2.20e-16;25!UBERON:0002365;1.28e-12;31!UBERON:0002330;1.28e-12;31!UBERON:0002368;1.67e-11;33!UBERON:0000949;3.38e-09;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.09e-21,19;UBERON:0006925,2.09e-21,19;UBERON:0008836,2.09e-21,19;UBERON:0008835,1.45e-18,22;UBERON:0003894,1.45e-18,22;UBERON:0009854,8.82e-18,23;UBERON:0007499,2.12e-16,25;UBERON:0009497,2.12e-16,25;UBERON:0000015,2.12e-16,25;UBERON:0002423,2.12e-16,25;UBERON:0006235,2.12e-16,25;UBERON:0004161,2.12e-16,25;UBERON:0009856,8.64e-16,26;UBERON:0002365,2.53e-13,31;UBERON:0002330,2.53e-13,31;UBERON:0002368,7.47e-12,35;UBERON:0005911,5.08e-11,82;UBERON:0001041,2.16e-10,87;UBERON:0000949,2.59e-09,45;UBERON:0005177,5.87e-09,101;UBERON:0009569,4.44e-08,112;UBERON:0003929,8.01e-08,54;UBERON:0005172,8.01e-08,54;UBERON:0005173,8.01e-08,54;UBERON:0004921,1.33e-07,118;UBERON:0002530,3.45e-07,59;UBERON:0002417,4.48e-07,60;UBERON:0000916,4.48e-07,60 | |||
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|short_description=p1@MTND2P31 | |short_description=p1@MTND2P31 | ||
}} | }} |
Latest revision as of 22:06, 15 September 2015
Short description: | p1@MTND2P31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MTND2P31_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 174bp_to_ENST00000512602_5end |
EntrezGene: | NA |
HGNC: | 42132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.58e-33 | 12 |
endodermal cell | 2.63e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.09e-21 | 19 |
digestive gland | 2.09e-21 | 19 |
liver bud | 2.09e-21 | 19 |
hepatic diverticulum | 1.45e-18 | 22 |
liver primordium | 1.45e-18 | 22 |
digestive tract diverticulum | 8.82e-18 | 23 |
epithelial sac | 2.12e-16 | 25 |
epithelium of foregut-midgut junction | 2.12e-16 | 25 |
anatomical boundary | 2.12e-16 | 25 |
hepatobiliary system | 2.12e-16 | 25 |
foregut-midgut junction | 2.12e-16 | 25 |
septum transversum | 2.12e-16 | 25 |
sac | 8.64e-16 | 26 |
exocrine gland | 2.53e-13 | 31 |
exocrine system | 2.53e-13 | 31 |
endocrine gland | 7.47e-12 | 35 |
endo-epithelium | 5.08e-11 | 82 |
foregut | 2.16e-10 | 87 |
endocrine system | 2.59e-09 | 45 |
trunk region element | 5.87e-09 | 101 |
subdivision of trunk | 4.44e-08 | 112 |
gut epithelium | 8.01e-08 | 54 |
abdomen element | 8.01e-08 | 54 |
abdominal segment element | 8.01e-08 | 54 |
subdivision of digestive tract | 1.33e-07 | 118 |
gland | 3.45e-07 | 59 |
abdominal segment of trunk | 4.48e-07 | 60 |
abdomen | 4.48e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.26e-25 | 1 |
mesenchymal cell neoplasm | 1.55e-13 | 2 |
lung carcinoma | 5.83e-12 | 9 |
lung large cell carcinoma | 1.30e-09 | 3 |
lung cancer | 1.49e-07 | 15 |
lung small cell carcinoma | 1.92e-07 | 4 |
respiratory system cancer | 3.90e-07 | 16 |