FFCP PHASE1:Hg19::chr4:145580883..145580893,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:145580883..145580893,+ | |||
|coexpression_cluster_id=C419 | |coexpression_cluster_id=C419 | ||
|description=CAGE_peak_at_chr4:145580883..145580893,+ | |description=CAGE_peak_at_chr4:145580883..145580893,+ | ||
|id=chr4:145580883..145580893,+ | |id=chr4:145580883..145580893,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000084;5.17e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.27e-09,25;CL:0000827,5.27e-09,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!3.07e-16!1;DOID:4549!3.07e-16!1;DOID:5861!3.07e-16!1;DOID:6496!3.07e-16!1;DOID:3910!6.42e-09!2 | |ontology_enrichment_disease=DOID:3371!3.07e-16!1;DOID:4549!3.07e-16!1;DOID:5861!3.07e-16!1;DOID:6496!3.07e-16!1;DOID:3910!6.42e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:2531;5.77e-08;51!DOID:0060083;5.77e-08;51!DOID:1036;1.49e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.17e-09,51;DOID:0060083,1.17e-09,51;DOID:1036,1.49e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.09e-16!4;UBERON:0005058!2.09e-16!4;UBERON:0009113!2.09e-16!4;UBERON:0003295!2.09e-16!4;UBERON:0005562!2.09e-16!4;UBERON:0003351!2.91e-11!6;UBERON:0004177!8.72e-10!7;UBERON:0004903!6.42e-09!2;UBERON:0002173!6.42e-09!2;UBERON:0002186!6.42e-09!2;UBERON:0000974!4.13e-07!10;UBERON:0003408!4.13e-07!10;UBERON:0001042!4.13e-07!10;UBERON:0009145!4.13e-07!10 | |ontology_enrichment_uberon=UBERON:0002370!2.09e-16!4;UBERON:0005058!2.09e-16!4;UBERON:0009113!2.09e-16!4;UBERON:0003295!2.09e-16!4;UBERON:0005562!2.09e-16!4;UBERON:0003351!2.91e-11!6;UBERON:0004177!8.72e-10!7;UBERON:0004903!6.42e-09!2;UBERON:0002173!6.42e-09!2;UBERON:0002186!6.42e-09!2;UBERON:0000974!4.13e-07!10;UBERON:0003408!4.13e-07!10;UBERON:0001042!4.13e-07!10;UBERON:0009145!4.13e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.18e-26;2!UBERON:0005058;9.18e-26;2!UBERON:0009113;9.18e-26;2!UBERON:0004177;3.60e-11;5!UBERON:0005057;3.60e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.29e-13,4;UBERON:0005058,1.29e-13,4;UBERON:0009113,1.29e-13,4;UBERON:0003295,1.29e-13,4;UBERON:0005562,1.29e-13,4;UBERON:0003351,1.57e-09,6;UBERON:0004177,2.35e-08,7;UBERON:0005057,2.35e-08,7 | |||
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|short_description=p@chr4:145580883..145580893,+ | |short_description=p@chr4:145580883..145580893,+ | ||
}} | }} |
Latest revision as of 02:01, 30 July 2015
Short description: | p@chr4:145580883..145580893, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:145580883..145580893, + |
Coexpression cluster: | C419_acute_chronic_thymus_xeroderma_Burkitt_Hodgkin_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 5.27e-09 | 25 |
pro-T cell | 5.27e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.29e-13 | 4 |
hemolymphoid system gland | 1.29e-13 | 4 |
thymic region | 1.29e-13 | 4 |
pharyngeal gland | 1.29e-13 | 4 |
thymus primordium | 1.29e-13 | 4 |
pharyngeal epithelium | 1.57e-09 | 6 |
hemopoietic organ | 2.35e-08 | 7 |
immune organ | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.17e-09 | 51 |
immune system cancer | 1.17e-09 | 51 |
chronic leukemia | 1.49e-07 | 8 |