FFCP PHASE1:Hg19::chr5:126113041..126113051,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4001 | |EntrezGene=4001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6637 | |HGNC=6637 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000463908_5end | |association_with_transcript=-19bp_to_ENST00000463908_5end | ||
|cluster_id=chr5:126113041..126113051,+ | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_13_at_LMNB1_5end | |description=CAGE_peak_13_at_LMNB1_5end | ||
|id=chr5:126113041..126113051,+ | |id=chr5:126113041..126113051,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;8.86e-16;12!CL:0002363;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.16e-15,12;CL:0002363,5.60e-07,2;CL:0000008,5.60e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.03e-10;11!UBERON:0009497;1.20e-08;13!CL:0000008;3.92e-07;2 | |||
|ontology_enrichment_disease=DOID:305!1.20e-13!106;DOID:162!5.90e-12!235;DOID:0050687!1.15e-11!143;DOID:14566!1.36e-11!239 | |ontology_enrichment_disease=DOID:305!1.20e-13!106;DOID:162!5.90e-12!235;DOID:0050687!1.15e-11!143;DOID:14566!1.36e-11!239 | ||
|ontology_enrichment_disease_v019=DOID:1799;5.37e-13;1!DOID:10165;5.37e-13;1!DOID:1798;5.37e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,6.06e-13,1;DOID:10165,6.06e-13,1;DOID:1798,6.06e-13,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.73e-11;10!UBERON:0002107;4.62e-10;19!UBERON:0006925;4.62e-10;19!UBERON:0000178;7.89e-08;15!UBERON:0000179;7.89e-08;15!UBERON:0000463;7.89e-08;15!UBERON:0002423;1.08e-07;25!UBERON:0003566;3.92e-07;2!UBERON:0001777;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.73e-11,10;UBERON:0000358,1.73e-11,10;UBERON:0000307,1.73e-11,10;UBERON:0000091,1.73e-11,10;UBERON:0000087,1.73e-11,10;UBERON:0007010,1.73e-11,10;UBERON:0007806,1.73e-11,10;UBERON:0008780,1.73e-11,10;UBERON:0005728,1.73e-11,10;UBERON:0002107,5.47e-10,19;UBERON:0006925,5.47e-10,19;UBERON:0008836,5.47e-10,19;UBERON:0008835,1.18e-08,22;UBERON:0003894,1.18e-08,22;UBERON:0009854,2.74e-08,23;UBERON:0000178,7.89e-08,15;UBERON:0000179,7.89e-08,15;UBERON:0000463,7.89e-08,15;UBERON:0007499,1.22e-07,25;UBERON:0009497,1.22e-07,25;UBERON:0000015,1.22e-07,25;UBERON:0002423,1.22e-07,25;UBERON:0006235,1.22e-07,25;UBERON:0004161,1.22e-07,25;UBERON:0009856,2.36e-07,26;UBERON:0003566,5.60e-07,2;UBERON:0001777,5.60e-07,2 | |||
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| ||
|short_description=p13@LMNB1 | |short_description=p13@LMNB1 | ||
}} | }} |
Latest revision as of 01:38, 20 September 2015
Short description: | p13@LMNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_LMNB1_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -19bp_to_ENST00000463908_5end |
EntrezGene: | LMNB1 |
HGNC: | 6637 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.16e-15 | 12 |
keratocyte | 5.60e-07 | 2 |
migratory cranial neural crest cell | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.73e-11 | 10 |
blastocyst | 1.73e-11 | 10 |
blastula | 1.73e-11 | 10 |
bilaminar disc | 1.73e-11 | 10 |
inner cell mass | 1.73e-11 | 10 |
cleaving embryo | 1.73e-11 | 10 |
connecting stalk | 1.73e-11 | 10 |
inner cell mass derived epiblast | 1.73e-11 | 10 |
extraembryonic mesoderm | 1.73e-11 | 10 |
liver | 5.47e-10 | 19 |
digestive gland | 5.47e-10 | 19 |
liver bud | 5.47e-10 | 19 |
hepatic diverticulum | 1.18e-08 | 22 |
liver primordium | 1.18e-08 | 22 |
digestive tract diverticulum | 2.74e-08 | 23 |
blood | 7.89e-08 | 15 |
haemolymphatic fluid | 7.89e-08 | 15 |
organism substance | 7.89e-08 | 15 |
epithelial sac | 1.22e-07 | 25 |
epithelium of foregut-midgut junction | 1.22e-07 | 25 |
anatomical boundary | 1.22e-07 | 25 |
hepatobiliary system | 1.22e-07 | 25 |
foregut-midgut junction | 1.22e-07 | 25 |
septum transversum | 1.22e-07 | 25 |
sac | 2.36e-07 | 26 |
head connective tissue | 5.60e-07 | 2 |
substantia propria of cornea | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.06e-13 | 1 |
endocrine pancreas cancer | 6.06e-13 | 1 |
pancreatic endocrine carcinoma | 6.06e-13 | 1 |