FFCP PHASE1:Hg19::chr5:150648469..150648481,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2760 | |EntrezGene=2760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4367 | |HGNC=4367 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-279bp_to_uc003ltu.1_5end | |association_with_transcript=-279bp_to_uc003ltu.1_5end | ||
|cluster_id=chr5:150648469..150648481,+ | |||
|coexpression_cluster_id=C71 | |coexpression_cluster_id=C71 | ||
|description=CAGE_peak_15_at_GM2A_5end | |description=CAGE_peak_15_at_GM2A_5end | ||
|id=chr5:150648469..150648481,+ | |id=chr5:150648469..150648481,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.46e-91;6!CL:0000473;1.61e-12;39!CL:0000234;1.61e-12;39!CL:0002541;1.35e-08;3!CL:0002615;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.22e-91,6;CL:0002194,2.54e-13,59;CL:0000576,2.54e-13,59;CL:0000040,2.54e-13,59;CL:0000559,2.54e-13,59;CL:0002009,6.83e-13,61;CL:0000839,6.24e-12,66;CL:0000557,9.35e-12,67;CL:0000473,9.54e-12,48;CL:0000234,9.54e-12,48;CL:0000766,5.98e-11,72;CL:0002541,1.40e-08,3;CL:0002615,1.51e-08,3;CL:0000763,2.61e-07,108;CL:0000049,2.61e-07,108;CL:0002087,7.32e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.35e-08;3!UBERON:0000920;1.35e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.22e-10,76;UBERON:0001474,1.26e-09,82;UBERON:0004765,8.95e-09,90;UBERON:0000920,1.40e-08,3;UBERON:0002405,1.71e-08,93;UBERON:0002390,4.65e-08,98;UBERON:0003061,4.65e-08,98;UBERON:0001434,6.74e-08,100;UBERON:0002193,2.61e-07,108 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0.649094787309367,0.522389211897802,2.79211717089617,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,2.57404691653161,1.33768046059855,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0,0.063497894292169,0,0,0,0.308482478109971,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,9.72990245129524,3.51579964002488,44.2751272914366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0,0,0.193978032976839,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0,0,0,0,0.150420656698515,0,0,0.261906694481422,0.163771917510097,0,0,0.781078098613847,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.6828739083758,0.691259661814092,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.154348316215889,0,0,0,0,0.588925401344836,0,0,0,0,0.0644578879735772,0.0999411559249289,0.178553938605658,0,0,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0.649094787309367,0.522389211897802,2.79211717089617,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,2.57404691653161,1.33768046059855,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0,0.063497894292169,0,0,0,0.308482478109971,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,9.72990245129524,3.51579964002488,44.2751272914366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0,0,0.193978032976839,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0,0,0,0,0.150420656698515,0,0,0.261906694481422,0.163771917510097,0,0,0.781078098613847,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.6828739083758,0.691259661814092,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.154348316215889,0,0,0,0,0.588925401344836,0,0,0,0,0.0644578879735772,0.0999411559249289,0.178553938605658,0,0,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p15@GM2A | |short_description=p15@GM2A | ||
}} | }} |
Latest revision as of 08:55, 16 September 2015
Short description: | p15@GM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_GM2A_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | -279bp_to_uc003ltu.1_5end |
EntrezGene: | GM2A |
HGNC: | 4367 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.22e-91 | 6 |
monopoietic cell | 2.54e-13 | 59 |
monocyte | 2.54e-13 | 59 |
monoblast | 2.54e-13 | 59 |
promonocyte | 2.54e-13 | 59 |
macrophage dendritic cell progenitor | 6.83e-13 | 61 |
myeloid lineage restricted progenitor cell | 6.24e-12 | 66 |
granulocyte monocyte progenitor cell | 9.35e-12 | 67 |
defensive cell | 9.54e-12 | 48 |
phagocyte | 9.54e-12 | 48 |
myeloid leukocyte | 5.98e-11 | 72 |
chorionic membrane mesenchymal stem cell | 1.40e-08 | 3 |
adipocyte of omentum tissue | 1.51e-08 | 3 |
myeloid cell | 2.61e-07 | 108 |
common myeloid progenitor | 2.61e-07 | 108 |
nongranular leukocyte | 7.32e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.22e-10 | 76 |
bone element | 1.26e-09 | 82 |
skeletal element | 8.95e-09 | 90 |
egg chorion | 1.40e-08 | 3 |
immune system | 1.71e-08 | 93 |
hematopoietic system | 4.65e-08 | 98 |
blood island | 4.65e-08 | 98 |
skeletal system | 6.74e-08 | 100 |
hemolymphoid system | 2.61e-07 | 108 |