FFCP PHASE1:Hg19::chr6:50787392..50787404,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:50787392..50787404,+ | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_at_chr6:50787392..50787404,+ | |description=CAGE_peak_at_chr6:50787392..50787404,+ | ||
|id=chr6:50787392..50787404,+ | |id=chr6:50787392..50787404,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.87e-13!3;CL:1000615!2.87e-13!3;CL:0002306!2.87e-13!3;CL:0000197!1.21e-11!6;CL:0000098!1.21e-11!6;CL:0002167!1.21e-11!6;CL:0002363!1.54e-09!2;CL:0000008!1.54e-09!2;CL:0000075!1.24e-08!27;CL:1000507!2.68e-08!12;CL:1000494!2.68e-08!12;CL:0000080!2.86e-07!6 | |ontology_enrichment_celltype=CL:0000239!2.87e-13!3;CL:1000615!2.87e-13!3;CL:0002306!2.87e-13!3;CL:0000197!1.21e-11!6;CL:0000098!1.21e-11!6;CL:0002167!1.21e-11!6;CL:0002363!1.54e-09!2;CL:0000008!1.54e-09!2;CL:0000075!1.24e-08!27;CL:1000507!2.68e-08!12;CL:1000494!2.68e-08!12;CL:0000080!2.86e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000222;9.99e-30;1!CL:0002363;2.55e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,2.37e-15,2;CL:0000008,2.37e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.91e-15;2!CL:0000008;2.55e-15;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001301;2.05e-29;1!UBERON:0002331;3.17e-26;10!UBERON:0000178;9.02e-18;15!UBERON:0000179;9.02e-18;15!UBERON:0000463;9.02e-18;15!UBERON:0003566;2.55e-15;2!UBERON:0001777;2.55e-15;2!UBERON:0000478;2.15e-11;24!UBERON:0006947;9.43e-11;3!UBERON:0004054;9.43e-11;3!UBERON:0002390;8.43e-09;32!UBERON:0005904;2.18e-08;4!UBERON:0003891;2.52e-08;4!UBERON:0000964;2.52e-08;4!UBERON:0010409;2.52e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.37e-29,1;UBERON:0002331,3.03e-26,10;UBERON:0000358,3.03e-26,10;UBERON:0000307,3.03e-26,10;UBERON:0000091,3.03e-26,10;UBERON:0000087,3.03e-26,10;UBERON:0007010,3.03e-26,10;UBERON:0007806,3.03e-26,10;UBERON:0008780,3.03e-26,10;UBERON:0005728,3.03e-26,10;UBERON:0000178,8.77e-18,15;UBERON:0000179,8.77e-18,15;UBERON:0000463,8.77e-18,15;UBERON:0003566,2.37e-15,2;UBERON:0001777,2.37e-15,2;UBERON:0000478,2.11e-11,24;UBERON:0006947,9.90e-11,3;UBERON:0004054,9.90e-11,3;UBERON:0005904,2.26e-08,4;UBERON:0003891,2.43e-08,4;UBERON:0000964,2.43e-08,4;UBERON:0010409,2.43e-08,4;UBERON:0004348,2.43e-08,4;UBERON:0005427,2.43e-08,4 | |||
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| ||
|short_description=p@chr6:50787392..50787404,+ | |short_description=p@chr6:50787392..50787404,+ | ||
}} | }} |
Latest revision as of 02:17, 31 July 2015
Short description: | p@chr6:50787392..50787404, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:50787392..50787404, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 2.37e-15 | 2 |
migratory cranial neural crest cell | 2.37e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.37e-29 | 1 |
umbilical cord | 3.03e-26 | 10 |
blastocyst | 3.03e-26 | 10 |
blastula | 3.03e-26 | 10 |
bilaminar disc | 3.03e-26 | 10 |
inner cell mass | 3.03e-26 | 10 |
cleaving embryo | 3.03e-26 | 10 |
connecting stalk | 3.03e-26 | 10 |
inner cell mass derived epiblast | 3.03e-26 | 10 |
extraembryonic mesoderm | 3.03e-26 | 10 |
blood | 8.77e-18 | 15 |
haemolymphatic fluid | 8.77e-18 | 15 |
organism substance | 8.77e-18 | 15 |
head connective tissue | 2.37e-15 | 2 |
substantia propria of cornea | 2.37e-15 | 2 |
extraembryonic structure | 2.11e-11 | 24 |
male genital duct | 9.90e-11 | 3 |
internal male genitalia | 9.90e-11 | 3 |
duct of male reproductive system | 2.26e-08 | 4 |
stroma | 2.43e-08 | 4 |
cornea | 2.43e-08 | 4 |
eye surface | 2.43e-08 | 4 |
optic eminence | 2.43e-08 | 4 |
corneal primordium | 2.43e-08 | 4 |