FFCP PHASE1:Hg19::chr8:123139671..123139687,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:123139671..123139687,+ | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr8:123139671..123139687,+ | |description=CAGE_peak_at_chr8:123139671..123139687,+ | ||
|id=chr8:123139671..123139687,+ | |id=chr8:123139671..123139687,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.43e-26!180;CL:0002620!4.00e-19!23;CL:0000680!4.01e-17!57;CL:0000056!4.01e-17!57;CL:0000355!4.01e-17!57;CL:0000192!7.52e-16!42;CL:0000514!7.52e-16!42;CL:0000359!1.84e-15!32;CL:0000187!2.36e-15!54;CL:0000393!4.49e-14!60;CL:0000211!4.49e-14!60;CL:0000057!7.77e-14!75;CL:0000183!2.31e-13!59;CL:0000144!2.72e-12!625;CL:0002371!9.37e-12!591;CL:0000723!4.70e-11!436;CL:0000034!2.03e-10!444;CL:0002539!3.72e-10!10;CL:0000220!5.08e-10!246;CL:0000048!6.43e-10!430;CL:0002321!8.21e-10!248;CL:0000548!2.20e-09!679;CL:0000004!2.20e-09!679;CL:0000255!2.20e-09!679;CL:0000012!3.35e-09!682;CL:0000222!3.70e-08!119;CL:0002159!1.40e-07!13;CL:0002594!3.07e-07!4;CL:0000003!6.42e-07!722 | |ontology_enrichment_celltype=CL:0000055!1.43e-26!180;CL:0002620!4.00e-19!23;CL:0000680!4.01e-17!57;CL:0000056!4.01e-17!57;CL:0000355!4.01e-17!57;CL:0000192!7.52e-16!42;CL:0000514!7.52e-16!42;CL:0000359!1.84e-15!32;CL:0000187!2.36e-15!54;CL:0000393!4.49e-14!60;CL:0000211!4.49e-14!60;CL:0000057!7.77e-14!75;CL:0000183!2.31e-13!59;CL:0000144!2.72e-12!625;CL:0002371!9.37e-12!591;CL:0000723!4.70e-11!436;CL:0000034!2.03e-10!444;CL:0002539!3.72e-10!10;CL:0000220!5.08e-10!246;CL:0000048!6.43e-10!430;CL:0002321!8.21e-10!248;CL:0000548!2.20e-09!679;CL:0000004!2.20e-09!679;CL:0000255!2.20e-09!679;CL:0000012!3.35e-09!682;CL:0000222!3.70e-08!119;CL:0002159!1.40e-07!13;CL:0002594!3.07e-07!4;CL:0000003!6.42e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0002559;4.35e-11;5!CL:0002159;2.24e-10;14!CL:0002539;1.92e-09;10!CL:0002166;4.75e-09;3!CL:0000346;7.46e-09;3!CL:1000428;7.46e-09;3!CL:0000515;8.38e-09;3!CL:0002621;1.68e-08;3!CL:0000511;5.44e-07;1!CL:0002625;5.44e-07;1!CL:0000216;5.44e-07;1!CL:0002601;5.44e-07;1!CL:0000056;8.43e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,3.94e-11,5;CL:0002159,2.42e-10,14;CL:0002539,1.44e-09,10;CL:0002166,4.49e-09,3;CL:0000346,7.20e-09,3;CL:1000428,7.20e-09,3;CL:0002621,2.55e-08,3;CL:0000511,3.60e-07,1;CL:0002625,3.60e-07,1;CL:0000216,3.60e-07,1;CL:0000515,6.32e-07,4;CL:0002601,9.73e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000515;8.43e-07;4 | |||
|ontology_enrichment_disease=DOID:17!2.94e-08!5;DOID:450!2.94e-08!5;DOID:66!2.94e-08!5;DOID:423!2.94e-08!5;DOID:0080000!2.94e-08!5;DOID:11722!2.94e-08!5 | |ontology_enrichment_disease=DOID:17!2.94e-08!5;DOID:450!2.94e-08!5;DOID:66!2.94e-08!5;DOID:423!2.94e-08!5;DOID:0080000!2.94e-08!5;DOID:11722!2.94e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:0060084;5.78e-18;3!DOID:127;5.78e-18;3!DOID:0060072;1.30e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.22e-18,3;DOID:127,2.22e-18,3;DOID:0060072,6.39e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.43e-21!45;UBERON:0002416!1.43e-21!45;UBERON:0004290!8.66e-20!70;UBERON:0002097!1.16e-19!40;UBERON:0000486!4.25e-19!82;UBERON:0000914!6.43e-19!83;UBERON:0002329!6.43e-19!83;UBERON:0003077!6.43e-19!83;UBERON:0003059!6.43e-19!83;UBERON:0007282!6.43e-19!83;UBERON:0009618!6.43e-19!83;UBERON:0007285!6.43e-19!83;UBERON:0001134!2.06e-15!61;UBERON:0002036!2.06e-15!61;UBERON:0003082!2.06e-15!61;UBERON:0002385!1.21e-14!63;UBERON:0001015!1.21e-14!63;UBERON:0000383!1.21e-14!63;UBERON:0001637!6.41e-12!42;UBERON:0003509!6.41e-12!42;UBERON:0004572!6.41e-12!42;UBERON:0004573!2.78e-10!33;UBERON:0004571!2.78e-10!33;UBERON:0004237!3.72e-10!10;UBERON:0004695!3.72e-10!10;UBERON:0002111!3.72e-10!10;UBERON:0004178!3.72e-10!10;UBERON:0005256!9.73e-10!143;UBERON:0003102!1.35e-09!95;UBERON:0001981!2.38e-09!60;UBERON:0007500!2.38e-09!60;UBERON:0004537!2.38e-09!60;UBERON:0006965!2.38e-09!60;UBERON:0004872!3.39e-09!84;UBERON:0000055!3.69e-08!69;UBERON:0000475!4.09e-08!365;UBERON:0001135!9.89e-08!15;UBERON:0002100!2.34e-07!216;UBERON:0001310!3.07e-07!4;UBERON:0002049!6.18e-07!79;UBERON:0007798!6.18e-07!79 | |ontology_enrichment_uberon=UBERON:0002199!1.43e-21!45;UBERON:0002416!1.43e-21!45;UBERON:0004290!8.66e-20!70;UBERON:0002097!1.16e-19!40;UBERON:0000486!4.25e-19!82;UBERON:0000914!6.43e-19!83;UBERON:0002329!6.43e-19!83;UBERON:0003077!6.43e-19!83;UBERON:0003059!6.43e-19!83;UBERON:0007282!6.43e-19!83;UBERON:0009618!6.43e-19!83;UBERON:0007285!6.43e-19!83;UBERON:0001134!2.06e-15!61;UBERON:0002036!2.06e-15!61;UBERON:0003082!2.06e-15!61;UBERON:0002385!1.21e-14!63;UBERON:0001015!1.21e-14!63;UBERON:0000383!1.21e-14!63;UBERON:0001637!6.41e-12!42;UBERON:0003509!6.41e-12!42;UBERON:0004572!6.41e-12!42;UBERON:0004573!2.78e-10!33;UBERON:0004571!2.78e-10!33;UBERON:0004237!3.72e-10!10;UBERON:0004695!3.72e-10!10;UBERON:0002111!3.72e-10!10;UBERON:0004178!3.72e-10!10;UBERON:0005256!9.73e-10!143;UBERON:0003102!1.35e-09!95;UBERON:0001981!2.38e-09!60;UBERON:0007500!2.38e-09!60;UBERON:0004537!2.38e-09!60;UBERON:0006965!2.38e-09!60;UBERON:0004872!3.39e-09!84;UBERON:0000055!3.69e-08!69;UBERON:0000475!4.09e-08!365;UBERON:0001135!9.89e-08!15;UBERON:0002100!2.34e-07!216;UBERON:0001310!3.07e-07!4;UBERON:0002049!6.18e-07!79;UBERON:0007798!6.18e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0002073;4.35e-11;5!UBERON:0001003;1.42e-09;15!UBERON:0007376;1.42e-09;15!UBERON:0004237;1.92e-09;10!UBERON:0004695;1.92e-09;10!UBERON:0002111;1.92e-09;10!UBERON:0004178;1.92e-09;10!UBERON:0000412;7.46e-09;3!UBERON:0001992;7.46e-09;3!UBERON:0002097;1.30e-08;41!UBERON:0001949;1.68e-08;3!UBERON:0010371;3.71e-08;31!UBERON:0002199;1.10e-07;46!UBERON:0002416;1.10e-07;46!UBERON:0001136;5.44e-07;1!UBERON:0001343;5.44e-07;1!UBERON:0004910;5.44e-07;1!UBERON:0004813;5.44e-07;1!UBERON:0001708;5.53e-07;4!UBERON:0008895;5.53e-07;4!UBERON:0000947;8.87e-07;21!UBERON:0010191;8.87e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,3.94e-11,5;UBERON:0005086,3.94e-11,5;UBERON:0002199,6.96e-11,46;UBERON:0002416,6.96e-11,46;UBERON:0002097,5.42e-10,41;UBERON:0004237,1.44e-09,10;UBERON:0004695,1.44e-09,10;UBERON:0002111,1.44e-09,10;UBERON:0004178,1.44e-09,10;UBERON:0001003,1.53e-09,15;UBERON:0007376,1.53e-09,15;UBERON:0007383,1.53e-09,15;UBERON:0000486,4.22e-09,83;UBERON:0000412,7.20e-09,3;UBERON:0001992,7.20e-09,3;UBERON:0003102,1.27e-08,99;UBERON:0001949,2.55e-08,3;UBERON:0002329,8.01e-08,71;UBERON:0003059,8.01e-08,71;UBERON:0007282,8.01e-08,71;UBERON:0004290,8.01e-08,71;UBERON:0009618,8.01e-08,71;UBERON:0003077,1.10e-07,72;UBERON:0007285,1.10e-07,72;UBERON:0007524,1.49e-07,73;UBERON:0001136,3.60e-07,1;UBERON:0001343,3.60e-07,1;UBERON:0004910,3.60e-07,1;UBERON:0005154,3.60e-07,1;UBERON:0005295,3.60e-07,1;UBERON:0004813,3.60e-07,1;UBERON:0005297,3.60e-07,1;UBERON:0005294,3.60e-07,1;UBERON:0010141,3.60e-07,1;UBERON:0005891,3.60e-07,1;UBERON:0001708,5.30e-07,4;UBERON:0008895,5.30e-07,4;UBERON:0007503,6.07e-07,78;UBERON:0000947,7.53e-07,21;UBERON:0010191,7.53e-07,21 | |||
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|short_description=p@chr8:123139671..123139687,+ | |short_description=p@chr8:123139671..123139687,+ | ||
}} | }} |
Latest revision as of 14:30, 31 July 2015
Short description: | p@chr8:123139671..123139687, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:123139671..123139687, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 3.94e-11 | 5 |
general ecto-epithelial cell | 2.42e-10 | 14 |
aortic smooth muscle cell | 1.44e-09 | 10 |
epithelial cell of Malassez | 4.49e-09 | 3 |
hair follicle dermal papilla cell | 7.20e-09 | 3 |
stem cell of epidermis | 7.20e-09 | 3 |
gingival epithelial cell | 2.55e-08 | 3 |
androgen binding protein secreting cell | 3.60e-07 | 1 |
seminiferous tubule epithelial cell | 3.60e-07 | 1 |
Sertoli cell | 3.60e-07 | 1 |
skeletal muscle myoblast | 6.32e-07 | 4 |
uterine smooth muscle cell | 9.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.22e-18 | 3 |
leiomyoma | 2.22e-18 | 3 |
benign neoplasm | 6.39e-14 | 4 |