FFCP PHASE1:Hg19::chr19:49199209..49199284,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:49199209..49199284,+
|short_description=p1@FUT2
|description=CAGE_peak_1_at_FUT2_5end
|association_with_transcript=0bp_to_ENST00000391876,ENST00000425340,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2524 | |EntrezGene=2524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4013 | |HGNC=4013 | ||
|TSSclassifier=strong | |||
|UniProt=Q10981,E7EW73,A8K2L2 | |UniProt=Q10981,E7EW73,A8K2L2 | ||
|association_with_transcript=0bp_to_ENST00000391876,ENST00000425340,ENST00000522966,NM_000511,NM_001097638,uc002pke.3,uc010emc.2_5end | |||
|cluster_id=chr19:49199209..49199284,+ | |||
|coexpression_cluster_id=C3780 | |||
|description=CAGE_peak_1_at_FUT2_5end | |||
|id=chr19:49199209..49199284,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.38e-18!43;CL:0000223!5.95e-13!59;CL:0000066!4.88e-11!254;CL:0002251!4.98e-10!21;CL:0002368!1.40e-09!13;CL:0002159!2.28e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.69e-14;42!CL:0002368;6.97e-13;13!CL:0002159;4.34e-10;14!CL:0002202;1.37e-08;9!CL:0002632;1.37e-08;9!CL:0000240;2.15e-07;6!CL:0000311;2.15e-07;6!CL:0000079;2.15e-07;6!CL:0000237;2.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.97e-18,42;CL:0002368,6.05e-13,13;CL:0000066,9.27e-13,253;CL:0000223,9.89e-12,58;CL:0002159,4.69e-10,14;CL:0002202,1.33e-08,9;CL:0002632,1.33e-08,9;CL:0000240,2.22e-07,6;CL:0000311,2.22e-07,6;CL:0000079,2.22e-07,6;CL:0000237,2.22e-07,6;CL:0000036,2.22e-07,6;CL:0000357,2.22e-07,6;CL:0000114,2.22e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;2.15e-07;6!CL:0000114;2.15e-07;6 | |||
|ontology_enrichment_disease=DOID:305!1.45e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.59e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.31e-21!169;UBERON:0000925!8.31e-21!169;UBERON:0006595!8.31e-21!169;UBERON:0007023!8.75e-20!115;UBERON:0001007!9.62e-18!155;UBERON:0001555!9.62e-18!155;UBERON:0007026!9.62e-18!155;UBERON:0004921!1.20e-15!129;UBERON:0004185!1.20e-15!129;UBERON:0000077!2.39e-12!130;UBERON:0000464!6.25e-12!104;UBERON:0000062!6.31e-12!511;UBERON:0001004!7.81e-12!72;UBERON:0000922!5.46e-11!612;UBERON:0000481!7.37e-11!347;UBERON:0000466!1.62e-10!126;UBERON:0000161!7.74e-10!35;UBERON:0000468!7.72e-09!659;UBERON:0002050!2.01e-08!605;UBERON:0005423!2.01e-08!605;UBERON:0000166!2.50e-08!21;UBERON:0001041!3.00e-08!98;UBERON:0000923!4.26e-08!604;UBERON:0005291!4.26e-08!604;UBERON:0006598!4.26e-08!604;UBERON:0002532!4.26e-08!604;UBERON:0005911!4.45e-08!82;UBERON:0005409!5.45e-08!35;UBERON:0000153!6.90e-08!129;UBERON:0007811!6.90e-08!129;UBERON:0000467!9.29e-08!625;UBERON:0000064!1.08e-07!219;UBERON:0000480!1.13e-07!626;UBERON:0005178!3.28e-07!34;UBERON:0002224!3.28e-07!34;UBERON:0000065!4.13e-07!53;UBERON:0000475!5.28e-07!365;UBERON:0004111!6.72e-07!241;UBERON:0005181!7.63e-07!35;UBERON:0000033!7.92e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.28e-15;33!UBERON:0005409;8.07e-14;22!UBERON:0000160;1.02e-11;17!UBERON:0001555;5.73e-09;54!UBERON:0007196;7.69e-08;15!UBERON:0001558;7.69e-08;15!UBERON:0005178;8.42e-08;34!UBERON:0002224;8.42e-08;34!UBERON:0005181;1.43e-07;35!UBERON:0004807;3.79e-07;22!UBERON:0000059;7.01e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.18e-18,160;UBERON:0000925,1.18e-18,160;UBERON:0006595,1.18e-18,160;UBERON:0001007,4.74e-16,145;UBERON:0001555,4.74e-16,145;UBERON:0007026,4.74e-16,145;UBERON:0004921,6.43e-15,118;UBERON:0001004,9.46e-12,74;UBERON:0000160,1.09e-11,17;UBERON:0005409,1.16e-11,25;UBERON:0011216,1.78e-09,223;UBERON:0005178,4.54e-09,34;UBERON:0002224,4.54e-09,34;UBERON:0000065,5.04e-09,54;UBERON:0005181,1.12e-08,35;UBERON:0007023,1.48e-08,114;UBERON:0000922,3.11e-08,592;UBERON:0007196,7.49e-08,15;UBERON:0001558,7.49e-08,15;UBERON:0005911,4.38e-07,82;UBERON:0001041,5.93e-07,87;UBERON:0000059,7.50e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,3.48900583986214,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,1.83884244895785,3.614471025339,4.80680213216824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,5.82872461268068,3.70784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.66304265816484,11.7280831854059,3.15485054927904,1.95157929807353,2.91565490307268,1.74290914304278,2.17688215532278,2.77552935963191,4.01475094983413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,16.234473887691,0,3.18275827685014,2.24803506515239,1.40740561376283,1.574003567695,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1227367581488,0.16798212819886,3.26082723657489,0,0,0,0,0,0.621984346622316,0.432359860250884,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.18531816896329,1.40354529212299,4.32780647998713,0,0,0,0.902399225814824,1.15523005656622,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,5.60727800699084,6.64860807142979,0.223874754722178,0,0,0,0,0,0.721287081534056,0,0,3.44559322797703,1.30012049207304,0,0,0,0,0,0,0,0,0,3.63626813794152,2.49847087574638,3.31793052485919,2.8324178639554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98288549449087,2.01090682660736,1.08890984861323,0.470719003883896,2.15252686335615,0,3.10401107475673,1.60806380144872,0,0,0,0,0,0,0,0,0.106824071127473,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.4453621420494,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,4.5827037297746,8.84108529699673,2.26739473068848,0,0,0,5.39210106883961,0,0,0.986434056369336,0,0,0,0.278304294485554,0,0,1.31189999994294,0.724999575434793,4.66553137970549,4.32231205497703,0,0,0,0,0,0,9.15490417902499,14.264724531128,8.86642856860643,1.09692698576986,0,2.92789862985067,5.84821964628858,0,0.23056390438806,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,2.93819054686466,6.36088821452734,0,29.8578579323551,37.9482951719325,43.3831402902874,0,0,0,0.269604531922708,0,0,0,1.36965233252463,0,21.7021421567165,65.3349866662785,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,2.77695581336209,3.33174151208884,0.0870592065804026,0,0,0,0,0,16.3911437865429,0,2.93774963014692,0,0,0.253243183823515,5.47543871657448,4.96984685559509,36.0735561109506,0.599428828746391,9.94223878363331,0,0,0,0,6.59943296927027,0,0,0,0,0,0,0,0,0,0,0,0,1.79711100449092,0,0.223171457441873,0.0671834724867263,0,0,0.472699093843342,0.164831716762333,0,0,0,0,0.136203406111576,4.34033500855552,5.63911690048659,7.06248574649615,0.674921674654501,8.51182150013745,0.182248669974074,0,1.10327990218877,1.04909176269996,0,0,4.41404953834724,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.26446520348538,0,3.52407511158336,1.9221734262185,1.25763444079733,1.24271716604159,0,0,0,1.27668251554036,0,0,0,0,3.92635240625586,0,0.244052529803926,0.751145584238999,0,0.998361463831671,0,0,0,0,0,0,1.87333962322753,2.17381542916238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0.194860308839388,0.132864840313363,1.4720885483026,0,0,1.05656061679314,0,0,0,0,0,4.47614424702222,1.86623178009892,0.127894371303652,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,2.55414174491442,0.82046545696302,0,1.45230230174858,0,0,0.196295437002051,0.235939446695481,2.20114318226015,0,0,0,0,1.27857558193737,0,10.1596821460302,0,0,11.8284868973636,0.135075169236789,0.781078098613847,1.86018116851066,0.126831620387814,0,55.3740344525754,2.48105589194647,0,8.30455779657369,2.14280734351315,1.00885116665647,0.606965604236632,2.27662191351298,0.0887023701626388,0,0,0,0.197318320688547,0.472775363535873,0,1.64835494986079,0,4.20408244970683,5.47895232305697,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0.17071847709395,0.691259661814092,93.3593368640002,0,0,20.3225784091646,1.14553434272025,0,0,0,11.6798778002139,23.4082415965957,0.647428837187895,0,0,2.91426595835484,1.87151570769685,0.397901550322736,0,0.11294608203896,0,5.1327366812669,59.0382309525777,68.6277019982426,1.41095188908457,0.490296643507811,9.66273843116666,0,0,0.8453114551668,0,0.281951753939561,0.193373663920732,0,4.99951028095841,0,0,21.9100916473955,105.507735183044,0,0,0.271965960763659,0,31.2125835904086,0,0,0,0.126166424835079,0,0,4.69148616813116,4.54269588951453,2.84874188558019,2.75778293221613,0.227336094654718,0,0,0.103432995861895,24.3086739367118,5.23741749220229,0.516711278688049,0.31037357147929,0.112131862580613,0.12729431655633,0,23.5134087728718,14.373798645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| ||
|short_description=p1@FUT2 | |||
}} | }} |
Latest revision as of 03:50, 19 September 2015
Short description: | p1@FUT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FUT2_5end |
Coexpression cluster: | C3780_submaxillary_salivary_small_parotid_duodenum_colon_gall |
Association with transcript: | 0bp_to_ENST00000391876, ENST00000425340, ENST00000522966, NM_000511, NM_001097638, uc002pke.3, uc010emc.2_5end |
EntrezGene: | FUT2 |
HGNC: | 4013 |
UniProt: | Q10981E7EW73A8K2L2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.97e-18 | 42 |
respiratory epithelial cell | 6.05e-13 | 13 |
epithelial cell | 9.27e-13 | 253 |
endodermal cell | 9.89e-12 | 58 |
general ecto-epithelial cell | 4.69e-10 | 14 |
epithelial cell of tracheobronchial tree | 1.33e-08 | 9 |
epithelial cell of lower respiratory tract | 1.33e-08 | 9 |
stratified squamous epithelial cell | 2.22e-07 | 6 |
keratin accumulating cell | 2.22e-07 | 6 |
stratified epithelial cell | 2.22e-07 | 6 |
keratinizing barrier epithelial cell | 2.22e-07 | 6 |
epithelial fate stem cell | 2.22e-07 | 6 |
stratified epithelial stem cell | 2.22e-07 | 6 |
surface ectodermal cell | 2.22e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.18e-18 | 160 |
endoderm | 1.18e-18 | 160 |
presumptive endoderm | 1.18e-18 | 160 |
digestive system | 4.74e-16 | 145 |
digestive tract | 4.74e-16 | 145 |
primitive gut | 4.74e-16 | 145 |
subdivision of digestive tract | 6.43e-15 | 118 |
respiratory system | 9.46e-12 | 74 |
intestine | 1.09e-11 | 17 |
gastrointestinal system | 1.16e-11 | 25 |
organ system subdivision | 1.78e-09 | 223 |
thoracic cavity element | 4.54e-09 | 34 |
thoracic cavity | 4.54e-09 | 34 |
respiratory tract | 5.04e-09 | 54 |
thoracic segment organ | 1.12e-08 | 35 |
adult organism | 1.48e-08 | 114 |
embryo | 3.11e-08 | 592 |
tracheobronchial tree | 7.49e-08 | 15 |
lower respiratory tract | 7.49e-08 | 15 |
endo-epithelium | 4.38e-07 | 82 |
foregut | 5.93e-07 | 87 |
large intestine | 7.50e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.59e-08 | 106 |