FFCP PHASE1:Hg19::chr19:55593143..55593185,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:55593143..55593185,+
|short_description=p5@EPS8L1
|description=CAGE_peak_5_at_EPS8L1_5end
|association_with_transcript=82bp_to_uc002qiv.2_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54869 | |EntrezGene=54869 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21295 | |HGNC=21295 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=82bp_to_uc002qiv.2_5end | |||
|cluster_id=chr19:55593143..55593185,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_5_at_EPS8L1_5end | |||
|id=chr19:55593143..55593185,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.72e-11!5;CL:0000039!1.46e-07!7;CL:0000586!1.46e-07!7;CL:0000148!6.36e-07!10;CL:0000541!6.36e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.84e-59;5!CL:0002321;1.06e-19;15!CL:0000039;1.67e-15;7!CL:0000586;1.67e-15;7!CL:0000148;3.95e-11;10!CL:0000147;4.21e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.52e-59,5;CL:0000039,2.37e-15,7;CL:0000586,2.37e-15,7;CL:0000148,3.50e-11,10;CL:0000541,3.50e-11,10;CL:0000147,3.87e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.95e-11;10!UBERON:0005564;4.95e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1325;7.14e-16;7!DOID:3904;7.14e-16;7!DOID:5409;8.92e-13;4!DOID:3905;1.76e-12;9!DOID:1324;1.06e-07;15!DOID:3910;2.50e-07;2!DOID:0050615;3.01e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,6.14e-16,7;DOID:3904,6.14e-16,7;DOID:5409,7.70e-13,4;DOID:3905,1.57e-12,9;DOID:1324,9.94e-08,15;DOID:3910,2.43e-07,2;DOID:0050615,2.82e-07,16 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.21e-13;8!UBERON:0000922;2.78e-13;49!UBERON:0003135;4.43e-10;11!UBERON:0004903;2.50e-07;2!UBERON:0002173;2.50e-07;2!UBERON:0002186;2.50e-07;2!UBERON:0001897;4.17e-07;2!UBERON:0010225;4.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.64e-13,8;UBERON:0003135,5.51e-10,11;UBERON:0004903,2.43e-07,2;UBERON:0002173,2.43e-07,2;UBERON:0002186,2.43e-07,2;UBERON:0001897,3.70e-07,2;UBERON:0010225,3.70e-07,2 | |||
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| ||
|short_description=p5@EPS8L1 | |||
}} | }} |
Latest revision as of 23:41, 19 September 2015
Short description: | p5@EPS8L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EPS8L1_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 82bp_to_uc002qiv.2_5end |
EntrezGene: | EPS8L1 |
HGNC: | 21295 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.52e-59 | 5 |
germ line cell | 2.37e-15 | 7 |
germ cell | 2.37e-15 | 7 |
melanocyte | 3.50e-11 | 10 |
melanoblast | 3.50e-11 | 10 |
pigment cell | 3.87e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 1.64e-13 | 8 |
male reproductive organ | 5.51e-10 | 11 |
bronchoalveolar duct junction | 2.43e-07 | 2 |
alveolar duct | 2.43e-07 | 2 |
bronchiole | 2.43e-07 | 2 |
dorsal plus ventral thalamus | 3.70e-07 | 2 |
thalamic complex | 3.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 6.14e-16 | 7 |
bronchogenic carcinoma | 6.14e-16 | 7 |
lung small cell carcinoma | 7.70e-13 | 4 |
lung carcinoma | 1.57e-12 | 9 |
lung cancer | 9.94e-08 | 15 |
lung adenocarcinoma | 2.43e-07 | 2 |
respiratory system cancer | 2.82e-07 | 16 |