FFCP PHASE1:Hg19::chr19:39899887..39899894,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=49bp_to_AJ227917_5end | |association_with_transcript=49bp_to_AJ227917_5end | ||
|cluster_id=chr19:39899887..39899894,+ | |||
|coexpression_cluster_id=C250 | |coexpression_cluster_id=C250 | ||
|description=CAGE_peak_4_at_AJ227917_5end | |description=CAGE_peak_4_at_AJ227917_5end | ||
|id=chr19:39899887..39899894,+ | |id=chr19:39899887..39899894,+ | ||
|ontology_enrichment_celltype=CL:0000860;8.89e-20;33!CL:0002057;8.89e-20;33!CL:0000576;9.36e-16;48!CL:0000766;3.36e-14;69!CL:0000473;1.07e-13;39!CL:0000234;1.07e-13;39!CL:0000097;2.16e-08;5!CL:0002087;1.19e-07;104!CL:0000738;1.81e-07;136!CL:0000763;2.32e-07;100!CL:0000775;3.78e-07;3!CL:0002393;3.96e-07;6!CL:0002397;3.96e-07;6 | |ontology_enrichment_celltype=CL:0002057!9.26e-33!42;CL:0000860!6.80e-31!45;CL:0000766!3.92e-27!76;CL:0000738!7.69e-27!140;CL:0000557!4.12e-24!71;CL:0002009!4.24e-23!65;CL:0000839!4.01e-22!70;CL:0002194!1.16e-21!63;CL:0000576!1.16e-21!63;CL:0000040!1.16e-21!63;CL:0000559!1.16e-21!63;CL:0002087!1.29e-21!119;CL:0002031!3.15e-21!124;CL:0000037!9.30e-18!172;CL:0000566!9.30e-18!172;CL:0000988!2.51e-17!182;CL:0002032!2.54e-16!165;CL:0000837!2.54e-16!165;CL:0000763!5.47e-15!112;CL:0000049!5.47e-15!112 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;8.89e-20;33!CL:0002057;8.89e-20;33!CL:0000576;9.36e-16;48!CL:0000766;3.36e-14;69!CL:0000473;1.07e-13;39!CL:0000234;1.07e-13;39!CL:0000097;2.16e-08;5!CL:0002087;1.19e-07;104!CL:0000738;1.81e-07;136!CL:0000763;2.32e-07;100!CL:0000775;3.78e-07;3!CL:0002393;3.96e-07;6!CL:0002397;3.96e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.05e-25,72;CL:0000860,3.14e-25,42;CL:0002057,3.14e-25,42;CL:0000738,1.26e-24,136;CL:0000557,1.51e-22,67;CL:0000473,1.44e-21,48;CL:0000234,1.44e-21,48;CL:0002031,7.34e-21,120;CL:0000839,1.18e-20,66;CL:0000037,1.50e-18,168;CL:0002032,3.43e-18,161;CL:0000837,3.43e-18,161;CL:0002009,7.18e-18,61;CL:0000988,3.09e-17,177;CL:0000763,5.94e-17,108;CL:0000049,5.94e-17,108;CL:0002087,8.40e-17,115;CL:0002194,1.89e-16,59;CL:0000576,1.89e-16,59;CL:0000040,1.89e-16,59;CL:0000559,1.89e-16,59;CL:0000097,1.71e-08,5;CL:0002028,1.71e-08,5;CL:0000134,1.70e-07,354;CL:0002320,3.35e-07,361;CL:0000775,3.63e-07,3;CL:0000623,8.21e-07,3;CL:0000825,8.21e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.58e-17;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.97e-22!102;UBERON:0003061!6.97e-22!102;UBERON:0002371!1.50e-20!80;UBERON:0001474!4.15e-19!86;UBERON:0002193!6.48e-19!112;UBERON:0004765!1.76e-16!101;UBERON:0001434!1.76e-16!101;UBERON:0002405!1.02e-13!115;UBERON:0002204!1.65e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.82e-19,82;UBERON:0002371,2.55e-19,76;UBERON:0004765,2.73e-17,90;UBERON:0002390,4.00e-17,98;UBERON:0003061,4.00e-17,98;UBERON:0001434,4.63e-15,100;UBERON:0002193,4.72e-15,108;UBERON:0002405,6.42e-15,93;UBERON:0002204,5.79e-08,167;UBERON:0003081,3.88e-07,203;UBERON:0002384,8.45e-07,371 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0.618831764800233,0.662794751455832,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0.383829398097213,4.02521920621798,0,0,0,0.0774672005803016,0,0,0.553995408531877,3.00816671205213,2.60413044859022,0,0,0.257575567634187,0.581592955118259,0,0.485168122375632,0.929716147622738,0.822335776043652,2.16794459626573,2.3015391385772,0.512321413058201,0.945928919554341,0.689491361473237,1.93645405075148,1.35426486594342,1.88242339542605,1.36453075028923,0.898893937780338,2.75475503133812,0.641858054152187,3.19668562899521,0.659702600373432,0.598390972864896,0.852449501065388,0.290209238628584,0,0.622822248995575,1.25624332628372,2.08593167368081,1.3031330682307,1.21079900526674,0.736555271975129,1.58231193720442,1.69004229049553,0.637812899895131,0,0.673971786878971,1.35159203557356,0.32145117339416,0,0.79566670879636,0.91332076882317,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,0,0.560508562981536,0,0.393419540227666,0.393010762749165,3.70082698199117,0,0,0,1.94826728407911,0,0.294605907474837,0.221533894583621,0,0.25618263945135,0.260118695119756,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,1.20964045934839,2.13952156626806,1.15859523106239,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,1.65862492432618,2.73827911492227,2.5248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0.985153801009636,1.94064817373566,2.56686072559497,0,0,0,0,0,3.74503511973591,5.9832291840805,0.828831026872071,0.736148950314839,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.413536052245775,1.72571360654893,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0,0.633322905892992,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0.714695326373367,1.23408681925858,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.47748896947538,0,0.307160702099232,1.9882952955326,0.140669416410513,0.111308705022906,0,0.211125408127993,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83309043480088,0.296521128680622,0.123563938946503,0,0.134802265961354,0.802577647298789,0,0,0,0.242780379534093,0.394584402849391,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0.0730893170861856,0,0.0969890164884194,0,0.451961481561065,0,0.19871461170299,0,0.586654148204409,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0.828478110694391,0,0.395223263795889,0.365377795142688,0,1.08803560673895,1.0027595760908,0,0.655745261419609,0,0,0,0,2.29363678276028,0,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,1.41070377476274,0,0.0642292250964595,2.8339315265117,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56215619722769,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.078493092850514,0.471346769748006,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0.596852325484105,0,0,0,0,0.0771741581079447,1.09279780251979,0,0.245148321753905,0,0.588925401344836,0,0.4226557275834,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0.730336388246517,0,0.430018749454354,0,0,0.436350690340377,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,1.65833887891756,0,0.639701945702943,0,0,0.0620747142958579,0,0,0.4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| ||
|short_description=p4@AJ227917 | |short_description=p4@AJ227917 | ||
}} | }} |
Latest revision as of 07:38, 26 July 2015
Short description: | p4@AJ227917 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AJ227917_5end |
Coexpression cluster: | C250_Mast_Neutrophils_CD14_Eosinophils_CD8_Peripheral_CD4 |
Association with transcript: | 49bp_to_AJ227917_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.05e-25 | 72 |
classical monocyte | 3.14e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.14e-25 | 42 |
leukocyte | 1.26e-24 | 136 |
granulocyte monocyte progenitor cell | 1.51e-22 | 67 |
defensive cell | 1.44e-21 | 48 |
phagocyte | 1.44e-21 | 48 |
hematopoietic lineage restricted progenitor cell | 7.34e-21 | 120 |
myeloid lineage restricted progenitor cell | 1.18e-20 | 66 |
hematopoietic stem cell | 1.50e-18 | 168 |
hematopoietic oligopotent progenitor cell | 3.43e-18 | 161 |
hematopoietic multipotent progenitor cell | 3.43e-18 | 161 |
macrophage dendritic cell progenitor | 7.18e-18 | 61 |
hematopoietic cell | 3.09e-17 | 177 |
myeloid cell | 5.94e-17 | 108 |
common myeloid progenitor | 5.94e-17 | 108 |
nongranular leukocyte | 8.40e-17 | 115 |
monopoietic cell | 1.89e-16 | 59 |
monocyte | 1.89e-16 | 59 |
monoblast | 1.89e-16 | 59 |
promonocyte | 1.89e-16 | 59 |
mast cell | 1.71e-08 | 5 |
basophil mast progenitor cell | 1.71e-08 | 5 |
mesenchymal cell | 1.70e-07 | 354 |
connective tissue cell | 3.35e-07 | 361 |
neutrophil | 3.63e-07 | 3 |
natural killer cell | 8.21e-07 | 3 |
pro-NK cell | 8.21e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.82e-19 | 82 |
bone marrow | 2.55e-19 | 76 |
skeletal element | 2.73e-17 | 90 |
hematopoietic system | 4.00e-17 | 98 |
blood island | 4.00e-17 | 98 |
skeletal system | 4.63e-15 | 100 |
hemolymphoid system | 4.72e-15 | 108 |
immune system | 6.42e-15 | 93 |
musculoskeletal system | 5.79e-08 | 167 |
lateral plate mesoderm | 3.88e-07 | 203 |
connective tissue | 8.45e-07 | 371 |