FFCP PHASE1:Hg19::chr10:127713413..127713421,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:127713413..127713421,- | |||
|description=CAGE_peak_at_chr10:127713413..127713421,- | |description=CAGE_peak_at_chr10:127713413..127713421,- | ||
|id=chr10:127713413..127713421,- | |id=chr10:127713413..127713421,- | ||
|ontology_enrichment_celltype=CL:0002568;1.03e-17;1!CL:0002541;6.14e-07;3!CL:0000134;6.52e-07;55!CL:0002590;9.11e-07;3 | |ontology_enrichment_celltype=CL:0002620!4.47e-07!23;CL:0000188!5.17e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0002568;1.03e-17;1!CL:0002541;6.14e-07;3!CL:0000134;6.52e-07;55!CL:0002590;9.11e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0002568,1.44e-17,1;CL:0002541,6.50e-07,3;CL:0002590,9.12e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0000941;1.03e-17;1!UBERON:0001785;1.03e-17;1!UBERON:0002464;1.03e-17;1!UBERON:0004904;1.03e-17;1!UBERON:0001021;1.03e-17;1!UBERON:0003714;1.57e-09;2!UBERON:0005162;1.57e-09;2!UBERON:0000122;1.57e-09;2!UBERON:0003124;6.14e-07;3!UBERON:0000920;6.14e-07;3!UBERON:0000478;7.54e-07;24 | |ontology_enrichment_development_v019=UBERON:0003124;4.83e-18;1!UBERON:0005425;1.03e-17;1!UBERON:0006215;9.11e-07;3!UBERON:0003056;9.11e-07;3 | ||
|ontology_enrichment_disease=DOID:2394!3.26e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.06e-09!57;UBERON:0005068!1.06e-09!57;UBERON:0006241!1.06e-09!57;UBERON:0007135!1.06e-09!57;UBERON:0002616!3.45e-08!59;UBERON:0003076!6.83e-08!15;UBERON:0003057!6.83e-08!15;UBERON:0004732!2.32e-07!13;UBERON:0003075!2.95e-07!86;UBERON:0007284!2.95e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.03e-17;1!UBERON:0001785;1.03e-17;1!UBERON:0002464;1.03e-17;1!UBERON:0004904;1.03e-17;1!UBERON:0001021;1.03e-17;1!UBERON:0003714;1.57e-09;2!UBERON:0005162;1.57e-09;2!UBERON:0000122;1.57e-09;2!UBERON:0003124;6.14e-07;3!UBERON:0000920;6.14e-07;3!UBERON:0000478;7.54e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.37e-18,1;UBERON:0001785,7.37e-18,1;UBERON:0002464,7.37e-18,1;UBERON:0004904,7.37e-18,1;UBERON:0001021,7.37e-18,1;UBERON:0003902,7.37e-18,1;UBERON:0005425,7.37e-18,1;UBERON:0003124,1.46e-10,7;UBERON:0003714,1.33e-09,2;UBERON:0005162,1.33e-09,2;UBERON:0000122,1.33e-09,2;UBERON:0000920,6.50e-07,3;UBERON:0000478,7.93e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0.443458794925128,0.087834785693126,0,0,0,0.97364218096405,0.696518949197069,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,1.00973509697646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.821905290201534,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,0,0.117141414992713,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29731237272711,0,0.082509499920588,0,0,0,0,0.154048617114644,0.460511024178389,0.551346289938122,0.214840489736547,0,0.340906509664404,0.267096106940212,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,1.116475108079,0,0,0,0,0,0,0,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0.124252535565433,0.235694034616795,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,1.10961172300523,0,0.251567901752575,0,0,0.151230923763239,0.466311601748341,0.295710299979268,0.318593534327405,0.449803112163605,0,0.829412415681711,0.53168342911599,2.08698024724694,0.300515217994437,1.14241563650639,0,0.545545977607678,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0.194860308839388,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,1.42769420259154,0,0,0,0,0.762764190934334,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,2.7497734750418,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p@chr10:127713413..127713421,- | |short_description=p@chr10:127713413..127713421,- | ||
}} | }} |
Latest revision as of 11:28, 23 July 2015
Short description: | p@chr10:127713413..127713421, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:127713413..127713421, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 1.44e-17 | 1 |
chorionic membrane mesenchymal stem cell | 6.50e-07 | 3 |
smooth muscle cell of the brain vasculature | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.37e-18 | 1 |
cranial nerve | 7.37e-18 | 1 |
nerve trunk | 7.37e-18 | 1 |
nerve connecting eye with brain | 7.37e-18 | 1 |
nerve | 7.37e-18 | 1 |
retinal neural layer | 7.37e-18 | 1 |
presumptive neural retina | 7.37e-18 | 1 |
chorion | 1.46e-10 | 7 |
neural tissue | 1.33e-09 | 2 |
multi cell component structure | 1.33e-09 | 2 |
neuron projection bundle | 1.33e-09 | 2 |
egg chorion | 6.50e-07 | 3 |
extraembryonic structure | 7.93e-07 | 24 |