FFCP PHASE1:Hg19::chr19:39215203..39215210,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:39215203..39215210,+ | |||
|coexpression_cluster_id=C3367 | |coexpression_cluster_id=C3367 | ||
|description=CAGE_peak_at_chr19:39215203..39215210,+ | |description=CAGE_peak_at_chr19:39215203..39215210,+ | ||
|id=chr19:39215203..39215210,+ | |id=chr19:39215203..39215210,+ | ||
|ontology_enrichment_celltype=CL:0000359;1.16e-08;32!CL:0000346;2.53e-08;3!CL:1000428;2.53e-08;3!CL:0000192;7.67e-08;43!CL:0002620;6.18e-07;23 | |ontology_enrichment_celltype=CL:0000548!5.02e-18!679;CL:0000004!5.02e-18!679;CL:0000255!5.02e-18!679;CL:0000012!1.81e-17!682;CL:0000003!5.79e-16!722;CL:0002371!9.50e-13!591;CL:0000055!1.90e-12!180;CL:0000144!3.07e-12!625;CL:0000220!2.53e-11!246;CL:0002321!6.26e-11!248;CL:0000066!6.79e-10!254;CL:0000222!1.03e-08!119;CL:0000680!8.54e-08!57;CL:0000056!8.54e-08!57;CL:0000355!8.54e-08!57;CL:0000192!9.93e-08!42;CL:0000514!9.93e-08!42;CL:0000183!1.28e-07!59;CL:0000187!2.25e-07!54 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;1.16e-08;32!CL:0000346;2.53e-08;3!CL:1000428;2.53e-08;3!CL:0000192;7.67e-08;43!CL:0002620;6.18e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.80e-10,43;CL:0000514,4.80e-10,43;CL:0000359,3.28e-09,32;CL:0000346,2.64e-08,3;CL:1000428,2.64e-08,3;CL:0000187,3.97e-08,55;CL:0000680,1.64e-07,58;CL:0000056,1.64e-07,58;CL:0000355,1.64e-07,58;CL:0000393,5.83e-07,61;CL:0000211,5.83e-07,61;CL:0002620,6.32e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;7.67e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0007500;2.68e-09;56!UBERON:0001981;2.68e-09;56!UBERON:0004537;2.68e-09;56!UBERON:0000412;2.53e-08;3!UBERON:0001992;2.53e-08;3!UBERON:0004573;3.87e-08;33!UBERON:0004571;3.87e-08;33!UBERON:0001637;4.61e-08;42!UBERON:0003509;4.61e-08;42!UBERON:0004572;4.61e-08;42 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.52e-10!79;UBERON:0007798!1.52e-10!79;UBERON:0000490!1.18e-09!138;UBERON:0004290!3.60e-08!70;UBERON:0000914!8.80e-08!83;UBERON:0002329!8.80e-08!83;UBERON:0003077!8.80e-08!83;UBERON:0003059!8.80e-08!83;UBERON:0007282!8.80e-08!83;UBERON:0009618!8.80e-08!83;UBERON:0007285!8.80e-08!83;UBERON:0000055!9.54e-08!69;UBERON:0000486!1.06e-07!82;UBERON:0004535!1.15e-07!110;UBERON:0001981!4.53e-07!60;UBERON:0007500!4.53e-07!60;UBERON:0004537!4.53e-07!60;UBERON:0006965!4.53e-07!60;UBERON:0001009!5.57e-07!113;UBERON:0001637!6.19e-07!42;UBERON:0003509!6.19e-07!42;UBERON:0004572!6.19e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;2.68e-09;56!UBERON:0001981;2.68e-09;56!UBERON:0004537;2.68e-09;56!UBERON:0000412;2.53e-08;3!UBERON:0001992;2.53e-08;3!UBERON:0004573;3.87e-08;33!UBERON:0004571;3.87e-08;33!UBERON:0001637;4.61e-08;42!UBERON:0003509;4.61e-08;42!UBERON:0004572;4.61e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.04e-11,42;UBERON:0003509,1.04e-11,42;UBERON:0004572,1.04e-11,42;UBERON:0007500,6.02e-11,59;UBERON:0001981,6.02e-11,59;UBERON:0004537,6.02e-11,59;UBERON:0006965,6.02e-11,59;UBERON:0000490,9.93e-11,148;UBERON:0002049,2.83e-10,78;UBERON:0007798,2.83e-10,78;UBERON:0000119,3.25e-10,309;UBERON:0000483,8.25e-10,306;UBERON:0002329,2.13e-09,71;UBERON:0003059,2.13e-09,71;UBERON:0007282,2.13e-09,71;UBERON:0004290,2.13e-09,71;UBERON:0009618,2.13e-09,71;UBERON:0003077,3.37e-09,72;UBERON:0007285,3.37e-09,72;UBERON:0007503,3.80e-09,78;UBERON:0007524,5.28e-09,73;UBERON:0000055,7.28e-09,68;UBERON:0004573,1.26e-08,33;UBERON:0004571,1.26e-08,33;UBERON:0000412,2.64e-08,3;UBERON:0001992,2.64e-08,3;UBERON:0004872,3.16e-08,83;UBERON:0003914,6.89e-08,117;UBERON:0005085,9.51e-08,31;UBERON:0000486,2.45e-07,83;UBERON:0002097,2.96e-07,41;UBERON:0002100,4.81e-07,199;UBERON:0001134,8.65e-07,62;UBERON:0002036,8.65e-07,62;UBERON:0003082,8.65e-07,62 | |||
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| ||
|short_description=p@chr19:39215203..39215210,+ | |short_description=p@chr19:39215203..39215210,+ | ||
}} | }} |
Latest revision as of 07:23, 26 July 2015
Short description: | p@chr19:39215203..39215210, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39215203..39215210, + |
Coexpression cluster: | C3367_Mesenchymal_Endothelial_Smooth_Placental_Fibroblast_Astrocyte_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.80e-10 | 43 |
smooth muscle myoblast | 4.80e-10 | 43 |
vascular associated smooth muscle cell | 3.28e-09 | 32 |
hair follicle dermal papilla cell | 2.64e-08 | 3 |
stem cell of epidermis | 2.64e-08 | 3 |
muscle cell | 3.97e-08 | 55 |
muscle precursor cell | 1.64e-07 | 58 |
myoblast | 1.64e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.64e-07 | 58 |
electrically responsive cell | 5.83e-07 | 61 |
electrically active cell | 5.83e-07 | 61 |
skin fibroblast | 6.32e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
artery | 1.04e-11 | 42 |
arterial blood vessel | 1.04e-11 | 42 |
arterial system | 1.04e-11 | 42 |
epithelial tube open at both ends | 6.02e-11 | 59 |
blood vessel | 6.02e-11 | 59 |
blood vasculature | 6.02e-11 | 59 |
vascular cord | 6.02e-11 | 59 |
unilaminar epithelium | 9.93e-11 | 148 |
vasculature | 2.83e-10 | 78 |
vascular system | 2.83e-10 | 78 |
cell layer | 3.25e-10 | 309 |
epithelium | 8.25e-10 | 306 |
somite | 2.13e-09 | 71 |
presomitic mesoderm | 2.13e-09 | 71 |
presumptive segmental plate | 2.13e-09 | 71 |
dermomyotome | 2.13e-09 | 71 |
trunk paraxial mesoderm | 2.13e-09 | 71 |
paraxial mesoderm | 3.37e-09 | 72 |
presumptive paraxial mesoderm | 3.37e-09 | 72 |
epithelial vesicle | 3.80e-09 | 78 |
dense mesenchyme tissue | 5.28e-09 | 73 |
vessel | 7.28e-09 | 68 |
systemic artery | 1.26e-08 | 33 |
systemic arterial system | 1.26e-08 | 33 |
dermal papilla | 2.64e-08 | 3 |
papillary layer of dermis | 2.64e-08 | 3 |
splanchnic layer of lateral plate mesoderm | 3.16e-08 | 83 |
epithelial tube | 6.89e-08 | 117 |
ectodermal placode | 9.51e-08 | 31 |
multilaminar epithelium | 2.45e-07 | 83 |
skin of body | 2.96e-07 | 41 |
trunk | 4.81e-07 | 199 |
skeletal muscle tissue | 8.65e-07 | 62 |
striated muscle tissue | 8.65e-07 | 62 |
myotome | 8.65e-07 | 62 |