FFCP PHASE1:Hg19::chr1:117307157..117307178,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:117307157..117307178,+
|short_description=p2@CD2
|description=CAGE_peak_2_at_CD2_5end
|association_with_transcript=-318bp_to_AK127925_5end
|EntrezGene=914...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=914 | |EntrezGene=914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1639 | |HGNC=1639 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-318bp_to_AK127925_5end | |||
|cluster_id=chr1:117307157..117307178,+ | |||
|coexpression_cluster_id=C726 | |||
|description=CAGE_peak_2_at_CD2_5end | |||
|id=chr1:117307157..117307178,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.49e-41!25;CL:0000827!2.49e-41!25;CL:0000791!1.46e-36!18;CL:0000789!1.46e-36!18;CL:0002420!1.46e-36!18;CL:0002419!1.46e-36!18;CL:0000790!1.46e-36!18;CL:0002087!8.26e-28!119;CL:0000738!3.22e-25!140;CL:0000625!1.45e-23!11;CL:0002031!3.91e-22!124;CL:0000838!2.58e-21!52;CL:0000542!9.19e-21!53;CL:0000051!9.19e-21!53;CL:0000037!7.87e-19!172;CL:0000566!7.87e-19!172;CL:0000988!6.93e-18!182;CL:0002032!3.32e-15!165;CL:0000837!3.32e-15!165;CL:0000624!7.27e-13!6;CL:0002057!3.83e-10!42;CL:0000860!3.54e-09!45;CL:0000898!2.04e-07!3;CL:0000842!7.44e-07!3;CL:0000623!7.91e-07!3;CL:0000825!7.91e-07!3;CL:0002194!8.22e-07!63;CL:0000576!8.22e-07!63;CL:0000040!8.22e-07!63;CL:0000559!8.22e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.88e-59;25!CL:0000791;4.50e-59;18!CL:0000789;4.50e-59;18!CL:0002419;4.50e-59;18!CL:0000625;1.07e-46;11!CL:0000624;4.32e-18;6!CL:0000542;1.61e-17;53!CL:0000898;1.54e-13;3!CL:0000815;1.22e-09;2!CL:0000792;1.22e-09;2!CL:0002677;1.22e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.52e-59,25;CL:0000827,2.52e-59,25;CL:0000791,2.82e-59,18;CL:0000789,2.82e-59,18;CL:0002420,2.82e-59,18;CL:0002419,2.82e-59,18;CL:0000790,2.82e-59,18;CL:0000625,7.71e-47,11;CL:0000838,3.14e-29,52;CL:0000542,1.38e-28,53;CL:0000051,1.38e-28,53;CL:0000624,3.67e-18,6;CL:0000898,1.41e-13,3;CL:0002087,4.22e-13,115;CL:0000738,1.68e-11,136;CL:0002031,4.39e-11,120;CL:0000815,1.22e-09,2;CL:0000792,1.22e-09,2;CL:0002677,1.22e-09,2;CL:0000037,2.35e-08,168;CL:0000988,1.11e-07,177;CL:0002032,4.10e-07,161;CL:0000837,4.10e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;4.50e-59;18!CL:0000051;1.61e-17;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.25e-13!102;UBERON:0003061!1.25e-13!102;UBERON:0002193!1.87e-13!112;UBERON:0000178!7.46e-12!15;UBERON:0000179!7.46e-12!15;UBERON:0000463!7.46e-12!15;UBERON:0002370!6.08e-09!4;UBERON:0005058!6.08e-09!4;UBERON:0009113!6.08e-09!4;UBERON:0003295!6.08e-09!4;UBERON:0005562!6.08e-09!4;UBERON:0004177!3.42e-07!7;UBERON:0001042!8.59e-07!10;UBERON:0009145!8.59e-07!10 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0.223915474239924,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,0.822335776043652,0,0,0.256160706529101,0.47296445977717,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0.224723484445085,0,0,0.639337125799041,0.329851300186716,0.797854630486527,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,6.28817220398664,2.87842098599313,4.17966238476695,2.60737813306872,1.4203434172042,0,13.1464339124505,3.53527088969805,6.86755073209225,6.77009659412539,12.0405840542135,11.1851038901495,8.05745732558013,8.0141505157896,4.34704628602579,3.26230438956533,4.28065324943541,2.09071047609954,5.21222976408804,2.68254345521345,2.06176467289578,10.3738073727996,2.86708872891687,5.85975108470777,5.70271226669025,5.27012916772205,5.11946444617674,3.74792179657038,5.6826540490564,4.10563998460523,1.20964045934839,6.95344509037119,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0.197030760201927,4.31255149719035,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.94142780736755,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,5.12682468456746,0.714695326373367,0.411362273086194,0,0,3.96562588147135,0,0,0,0,0,0.213425530045242,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5602073798847,0,0,0,0,0,0,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.723788404593,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,2.39984875025916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0.426467963801962,0,3.03567876229229,0.744896571550295,0,0,0,0,0.342233301085281,0.134704106029175,0,0,0,0,0,0,0,0,0,0,2.41528552309231,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0.223915474239924,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,0.822335776043652,0,0,0.256160706529101,0.47296445977717,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0.224723484445085,0,0,0.639337125799041,0.329851300186716,0.797854630486527,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,6.28817220398664,2.87842098599313,4.17966238476695,2.60737813306872,1.4203434172042,0,13.1464339124505,3.53527088969805,6.86755073209225,6.77009659412539,12.0405840542135,11.1851038901495,8.05745732558013,8.0141505157896,4.34704628602579,3.26230438956533,4.28065324943541,2.09071047609954,5.21222976408804,2.68254345521345,2.06176467289578,10.3738073727996,2.86708872891687,5.85975108470777,5.70271226669025,5.27012916772205,5.11946444617674,3.74792179657038,5.6826540490564,4.10563998460523,1.20964045934839,6.95344509037119,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0.197030760201927,4.31255149719035,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.94142780736755,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,5.12682468456746,0.714695326373367,0.411362273086194,0,0,3.96562588147135,0,0,0,0,0,0.213425530045242,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5602073798847,0,0,0,0,0,0,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.723788404593,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,2.39984875025916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0.426467963801962,0,3.03567876229229,0.744896571550295,0,0,0,0,0.342233301085281,0.134704106029175,0,0,0,0,0,0,0,0,0,0,2.41528552309231,0 | ||
|short_description=p2@CD2 | |||
}} | }} |
Latest revision as of 09:42, 16 September 2015
Short description: | p2@CD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD2_5end |
Coexpression cluster: | C726_chronic_CD4_Hodgkin_CD8_thymus_CD19_blood |
Association with transcript: | -318bp_to_AK127925_5end |
EntrezGene: | CD2 |
HGNC: | 1639 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.52e-59 | 25 |
pro-T cell | 2.52e-59 | 25 |
mature alpha-beta T cell | 2.82e-59 | 18 |
alpha-beta T cell | 2.82e-59 | 18 |
immature T cell | 2.82e-59 | 18 |
mature T cell | 2.82e-59 | 18 |
immature alpha-beta T cell | 2.82e-59 | 18 |
CD8-positive, alpha-beta T cell | 7.71e-47 | 11 |
lymphoid lineage restricted progenitor cell | 3.14e-29 | 52 |
lymphocyte | 1.38e-28 | 53 |
common lymphoid progenitor | 1.38e-28 | 53 |
CD4-positive, alpha-beta T cell | 3.67e-18 | 6 |
naive T cell | 1.41e-13 | 3 |
nongranular leukocyte | 4.22e-13 | 115 |
leukocyte | 1.68e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 4.39e-11 | 120 |
regulatory T cell | 1.22e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.22e-09 | 2 |
naive regulatory T cell | 1.22e-09 | 2 |
hematopoietic stem cell | 2.35e-08 | 168 |
hematopoietic cell | 1.11e-07 | 177 |
hematopoietic oligopotent progenitor cell | 4.10e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.10e-07 | 161 |