FFCP PHASE1:Hg19::chr11:69467214..69467238,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=595 | |EntrezGene=595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1582 | |HGNC=1582 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-126bp_to_AB075505_5end | |association_with_transcript=-126bp_to_AB075505_5end | ||
|cluster_id=chr11:69467214..69467238,+ | |||
|coexpression_cluster_id=C807 | |coexpression_cluster_id=C807 | ||
|description=CAGE_peak_5_at_CCND1_5end | |description=CAGE_peak_5_at_CCND1_5end | ||
|id=chr11:69467214..69467238,+ | |id=chr11:69467214..69467238,+ | ||
|ontology_enrichment_celltype=CL:0000359;8.54e-13;32!CL:0000192;2.31e-08;43!CL:0002539;5.59e-08;10!CL:0000147;1.20e-07;14 | |ontology_enrichment_celltype=CL:0002321!6.52e-19!248;CL:0000220!7.00e-19!246;CL:0000055!2.27e-17!180;CL:0000192!4.79e-12!42;CL:0000514!4.79e-12!42;CL:0000680!1.24e-11!57;CL:0000056!1.24e-11!57;CL:0000355!1.24e-11!57;CL:0000222!8.09e-11!119;CL:0000359!1.09e-10!32;CL:0000393!1.65e-10!60;CL:0000211!1.65e-10!60;CL:0000187!1.67e-10!54;CL:0000066!1.81e-09!254;CL:0000183!2.74e-09!59;CL:0000057!1.03e-07!75;CL:0000548!3.46e-07!679;CL:0000004!3.46e-07!679;CL:0000255!3.46e-07!679 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;8.54e-13;32!CL:0000192;2.31e-08;43!CL:0002539;5.59e-08;10!CL:0000147;1.20e-07;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.28e-13,32;CL:0000192,2.84e-11,43;CL:0000514,2.84e-11,43;CL:0000680,4.79e-09,58;CL:0000056,4.79e-09,58;CL:0000355,4.79e-09,58;CL:0002321,1.62e-08,250;CL:0000187,3.85e-08,55;CL:0002539,4.33e-08,10;CL:0000147,1.39e-07,14;CL:0000393,2.77e-07,61;CL:0000211,2.77e-07,61;CL:0000222,7.89e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;2.31e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004573;1.49e-10;33!UBERON:0004571;1.49e-10;33!UBERON:0001637;2.55e-09;42!UBERON:0003509;2.55e-09;42!UBERON:0004572;2.55e-09;42!UBERON:0000947;1.89e-08;21!UBERON:0010191;1.89e-08;21!UBERON:0004237;5.59e-08;10!UBERON:0004695;5.59e-08;10!UBERON:0002111;5.59e-08;10!UBERON:0004178;5.59e-08;10 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.39e-18!143;UBERON:0002100!7.18e-17!216;UBERON:0003914!7.26e-15!118;UBERON:0003104!9.95e-14!238;UBERON:0009142!9.95e-14!238;UBERON:0000475!1.25e-12!365;UBERON:0000914!4.33e-12!83;UBERON:0002329!4.33e-12!83;UBERON:0003077!4.33e-12!83;UBERON:0003059!4.33e-12!83;UBERON:0007282!4.33e-12!83;UBERON:0009618!4.33e-12!83;UBERON:0007285!4.33e-12!83;UBERON:0000490!4.51e-12!138;UBERON:0000468!5.46e-12!659;UBERON:0000486!1.35e-11!82;UBERON:0001637!2.00e-11!42;UBERON:0003509!2.00e-11!42;UBERON:0004572!2.00e-11!42;UBERON:0000481!2.69e-11!347;UBERON:0004290!6.17e-11!70;UBERON:0000467!9.95e-10!625;UBERON:0000055!1.42e-09!69;UBERON:0000480!1.53e-09!626;UBERON:0004573!1.55e-09!33;UBERON:0004571!1.55e-09!33;UBERON:0001134!1.65e-09!61;UBERON:0002036!1.65e-09!61;UBERON:0003082!1.65e-09!61;UBERON:0002049!1.82e-09!79;UBERON:0007798!1.82e-09!79;UBERON:0001981!2.81e-09!60;UBERON:0007500!2.81e-09!60;UBERON:0004537!2.81e-09!60;UBERON:0006965!2.81e-09!60;UBERON:0002385!3.13e-09!63;UBERON:0001015!3.13e-09!63;UBERON:0000383!3.13e-09!63;UBERON:0000483!4.03e-09!309;UBERON:0000119!8.55e-09!312;UBERON:0000923!1.34e-07!604;UBERON:0005291!1.34e-07!604;UBERON:0006598!1.34e-07!604;UBERON:0002532!1.34e-07!604;UBERON:0002050!1.94e-07!605;UBERON:0005423!1.94e-07!605;UBERON:0000922!2.75e-07!612;UBERON:0004872!2.97e-07!84;UBERON:0000477!4.01e-07!286;UBERON:0004111!8.06e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.49e-10;33!UBERON:0004571;1.49e-10;33!UBERON:0001637;2.55e-09;42!UBERON:0003509;2.55e-09;42!UBERON:0004572;2.55e-09;42!UBERON:0000947;1.89e-08;21!UBERON:0010191;1.89e-08;21!UBERON:0004237;5.59e-08;10!UBERON:0004695;5.59e-08;10!UBERON:0002111;5.59e-08;10!UBERON:0004178;5.59e-08;10 | |||
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| ||
|short_description=p5@CCND1 | |short_description=p5@CCND1 | ||
}} | }} |
Latest revision as of 21:33, 19 September 2015
Short description: | p5@CCND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCND1_5end |
Coexpression cluster: | C807_neuroectodermal_renal_leiomyoma_Smooth_neuroblastoma_Aortic_Melanocyte |
Association with transcript: | -126bp_to_AB075505_5end |
EntrezGene: | CCND1 |
HGNC: | 1582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.28e-13 | 32 |
smooth muscle cell | 2.84e-11 | 43 |
smooth muscle myoblast | 2.84e-11 | 43 |
muscle precursor cell | 4.79e-09 | 58 |
myoblast | 4.79e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.79e-09 | 58 |
embryonic cell | 1.62e-08 | 250 |
muscle cell | 3.85e-08 | 55 |
aortic smooth muscle cell | 4.33e-08 | 10 |
pigment cell | 1.39e-07 | 14 |
electrically responsive cell | 2.77e-07 | 61 |
electrically active cell | 2.77e-07 | 61 |
mesodermal cell | 7.89e-07 | 121 |