FFCP PHASE1:Hg19::chr18:24804022..24804043,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:24804022..24804043,+ | |||
|coexpression_cluster_id=C81 | |coexpression_cluster_id=C81 | ||
|description=CAGE_peak_at_chr18:24804022..24804043,+ | |description=CAGE_peak_at_chr18:24804022..24804043,+ | ||
|id=chr18:24804022..24804043,+ | |id=chr18:24804022..24804043,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:1001319!9.82e-10!1;CL:1000600!9.82e-10!1 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.32e-29;29!UBERON:0001041;1.15e-10;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003127;2.03e-66;2!UBERON:0002171;2.18e-34;1!UBERON:0006518;2.18e-34;1!UBERON:0008949;2.18e-34;1!UBERON:0000101;2.18e-34;1!UBERON:0002167;2.18e-34;1!UBERON:0003126;7.13e-20;7!UBERON:0001005;7.13e-20;7!UBERON:0005178;1.41e-19;34!UBERON:0002224;1.41e-19;34!UBERON:0000341;9.86e-18;2!UBERON:0005181;6.88e-17;35!UBERON:0000065;1.22e-14;44!UBERON:0002048;2.92e-14;22!UBERON:0000117;2.92e-14;22!UBERON:0000171;2.92e-14;22!UBERON:0000170;2.92e-14;22!UBERON:0000915;1.06e-10;52!UBERON:0007196;7.75e-10;15!UBERON:0001558;7.75e-10;15!UBERON:0001004;4.04e-08;65!UBERON:0000974;8.72e-07;6 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!3.75e-19!2;UBERON:0000341!7.03e-19!2;UBERON:0002171!1.65e-10!1;UBERON:0006518!1.65e-10!1;UBERON:0008949!1.65e-10!1;UBERON:0000101!1.65e-10!1;UBERON:0002167!1.65e-10!1;UBERON:0007029!3.40e-10!1;UBERON:0001000!4.44e-10!1;UBERON:0005352!4.44e-10!1;UBERON:0004645!9.82e-10!1;UBERON:0001256!9.82e-10!1;UBERON:0001259!9.82e-10!1;UBERON:0002372!1.17e-09!1;UBERON:0001961!1.17e-09!1;UBERON:0001744!1.17e-09!1;UBERON:0001735!1.17e-09!1;UBERON:0005178!4.89e-09!34;UBERON:0002224!4.89e-09!34;UBERON:0005181!9.16e-09!35;UBERON:0001004!1.32e-08!72;UBERON:0000974!1.81e-08!10;UBERON:0008947!4.94e-08!38;UBERON:0003258!4.94e-08!38;UBERON:0000065!1.93e-07!53;UBERON:0007023!1.97e-07!115;UBERON:0000464!6.62e-07!104;UBERON:0000344!7.64e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.03e-66;2!UBERON:0002171;2.18e-34;1!UBERON:0006518;2.18e-34;1!UBERON:0008949;2.18e-34;1!UBERON:0000101;2.18e-34;1!UBERON:0002167;2.18e-34;1!UBERON:0003126;7.13e-20;7!UBERON:0001005;7.13e-20;7!UBERON:0005178;1.41e-19;34!UBERON:0002224;1.41e-19;34!UBERON:0000341;9.86e-18;2!UBERON:0005181;6.88e-17;35!UBERON:0000065;1.22e-14;44!UBERON:0002048;2.92e-14;22!UBERON:0000117;2.92e-14;22!UBERON:0000171;2.92e-14;22!UBERON:0000170;2.92e-14;22!UBERON:0000915;1.06e-10;52!UBERON:0007196;7.75e-10;15!UBERON:0001558;7.75e-10;15!UBERON:0001004;4.04e-08;65!UBERON:0000974;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.45e-66,2;UBERON:0002171,1.84e-34,1;UBERON:0006518,1.84e-34,1;UBERON:0008949,1.84e-34,1;UBERON:0000101,1.84e-34,1;UBERON:0002167,1.84e-34,1;UBERON:0005178,1.18e-24,34;UBERON:0002224,1.18e-24,34;UBERON:0005181,5.71e-24,35;UBERON:0008947,3.98e-22,38;UBERON:0003258,3.98e-22,38;UBERON:0003126,6.48e-20,7;UBERON:0001005,6.48e-20,7;UBERON:0000341,9.07e-18,2;UBERON:0000915,2.52e-16,52;UBERON:0000065,9.69e-16,54;UBERON:0002048,3.13e-14,22;UBERON:0000117,3.13e-14,22;UBERON:0000171,3.13e-14,22;UBERON:0000170,3.13e-14,22;UBERON:0005597,3.13e-14,22;UBERON:0000118,3.13e-14,22;UBERON:0001004,1.28e-11,74;UBERON:0001041,6.00e-10,87;UBERON:0007196,7.41e-10,15;UBERON:0001558,7.41e-10,15;UBERON:0005153,9.09e-09,37;UBERON:0005177,1.27e-08,101;UBERON:0009569,8.20e-08,112;UBERON:0004921,2.25e-07,118;UBERON:0005157,4.79e-07,47 | |||
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|short_description=p@chr18:24804022..24804043,+ | |short_description=p@chr18:24804022..24804043,+ | ||
}} | }} |
Latest revision as of 00:11, 26 July 2015
Short description: | p@chr18:24804022..24804043, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:24804022..24804043, + |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.45e-66 | 2 |
lower lobe of right lung | 1.84e-34 | 1 |
right lung lobe | 1.84e-34 | 1 |
lower lobe of lung | 1.84e-34 | 1 |
lobe of lung | 1.84e-34 | 1 |
right lung | 1.84e-34 | 1 |
thoracic cavity element | 1.18e-24 | 34 |
thoracic cavity | 1.18e-24 | 34 |
thoracic segment organ | 5.71e-24 | 35 |
respiratory primordium | 3.98e-22 | 38 |
endoderm of foregut | 3.98e-22 | 38 |
trachea | 6.48e-20 | 7 |
respiratory airway | 6.48e-20 | 7 |
throat | 9.07e-18 | 2 |
thoracic segment of trunk | 2.52e-16 | 52 |
respiratory tract | 9.69e-16 | 54 |
lung | 3.13e-14 | 22 |
respiratory tube | 3.13e-14 | 22 |
respiration organ | 3.13e-14 | 22 |
pair of lungs | 3.13e-14 | 22 |
lung primordium | 3.13e-14 | 22 |
lung bud | 3.13e-14 | 22 |
respiratory system | 1.28e-11 | 74 |
foregut | 6.00e-10 | 87 |
tracheobronchial tree | 7.41e-10 | 15 |
lower respiratory tract | 7.41e-10 | 15 |
epithelial bud | 9.09e-09 | 37 |
trunk region element | 1.27e-08 | 101 |
subdivision of trunk | 8.20e-08 | 112 |
subdivision of digestive tract | 2.25e-07 | 118 |
epithelial fold | 4.79e-07 | 47 |