FFCP PHASE1:Hg19::chr1:95582881..95582994,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148534 | |EntrezGene=148534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26477 | |HGNC=26477 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MV1,C9JJM2 | |UniProt=Q96MV1,C9JJM2 | ||
|association_with_transcript=0bp_to_ENST00000370203,ENST00000456991,NM_152487,uc001drb.2,uc001drc.2_5end | |association_with_transcript=0bp_to_ENST00000370203,ENST00000456991,NM_152487,uc001drb.2,uc001drc.2_5end | ||
|cluster_id=chr1:95582881..95582994,+ | |||
|coexpression_cluster_id=C2605 | |coexpression_cluster_id=C2605 | ||
|description=CAGE_peak_1_at_TMEM56_5end | |description=CAGE_peak_1_at_TMEM56_5end | ||
|id=chr1:95582881..95582994,+ | |id=chr1:95582881..95582994,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0001869;6.61e-15;32!UBERON:0001893;7.16e-15;34!UBERON:0007023;1.24e-14;114!UBERON:0003528;1.31e-14;34!UBERON:0002020;1.31e-14;34!UBERON:0002791;1.49e-14;32!UBERON:0002780;2.58e-14;41!UBERON:0001890;2.58e-14;41!UBERON:0002619;4.14e-14;22!UBERON:0000073;5.54e-13;53!UBERON:0002616;5.54e-13;53!UBERON:0001950;6.67e-13;20!UBERON:0000956;1.23e-12;25!UBERON:0000203;1.23e-12;25!UBERON:0000955;2.57e-10;68!UBERON:0001017;1.15e-09;75!UBERON:0001016;1.77e-08;83 | |ontology_enrichment_development_v019=UBERON:0006601;5.44e-10;82!UBERON:0003104;2.43e-09;31!UBERON:0002532;2.93e-08;206!UBERON:0010316;2.93e-08;206!UBERON:0008947;3.84e-08;29!UBERON:0001041;7.08e-08;30!UBERON:0006595;1.12e-07;86 | ||
|ontology_enrichment_disease=DOID:305!3.70e-14!106;DOID:0050687!7.05e-13!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.67e-13,106;DOID:0050687,4.20e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.42e-50!115;UBERON:0003075!8.13e-24!86;UBERON:0007284!8.13e-24!86;UBERON:0005743!2.53e-23!86;UBERON:0001049!4.95e-23!57;UBERON:0005068!4.95e-23!57;UBERON:0006241!4.95e-23!57;UBERON:0007135!4.95e-23!57;UBERON:0001017!5.33e-22!82;UBERON:0000073!1.40e-21!94;UBERON:0001016!1.40e-21!94;UBERON:0002346!3.13e-21!90;UBERON:0000955!4.49e-21!69;UBERON:0006238!4.49e-21!69;UBERON:0002616!6.74e-19!59;UBERON:0003080!3.20e-18!42;UBERON:0002780!6.25e-18!41;UBERON:0001890!6.25e-18!41;UBERON:0006240!6.25e-18!41;UBERON:0000481!1.79e-17!347;UBERON:0003056!3.78e-17!61;UBERON:0000033!1.19e-16!123;UBERON:0001893!5.06e-16!34;UBERON:0000153!5.13e-16!129;UBERON:0007811!5.13e-16!129;UBERON:0002020!1.13e-15!34;UBERON:0003528!1.13e-15!34;UBERON:0004121!1.87e-15!169;UBERON:0002791!2.04e-15!33;UBERON:0001869!2.18e-15!32;UBERON:0000924!3.62e-14!173;UBERON:0006601!3.62e-14!173;UBERON:0000064!1.18e-12!219;UBERON:0002619!1.37e-12!22;UBERON:0000956!6.25e-12!25;UBERON:0000203!6.25e-12!25;UBERON:0001950!1.58e-11!20;UBERON:0001007!1.13e-10!155;UBERON:0001555!1.13e-10!155;UBERON:0007026!1.13e-10!155;UBERON:0004921!1.35e-10!129;UBERON:0004185!1.35e-10!129;UBERON:0000477!3.23e-10!286;UBERON:0000062!4.87e-10!511;UBERON:0000475!6.49e-10!365;UBERON:0004119!8.30e-09!169;UBERON:0000925!8.30e-09!169;UBERON:0006595!8.30e-09!169;UBERON:0000077!1.66e-08!130;UBERON:0004111!5.27e-08!241;UBERON:0000483!1.15e-07!309;UBERON:0000025!2.51e-07!194;UBERON:0000119!2.75e-07!312;UBERON:0005177!4.36e-07!107;UBERON:0000922!4.37e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.61e-15;32!UBERON:0001893;7.16e-15;34!UBERON:0007023;1.24e-14;114!UBERON:0003528;1.31e-14;34!UBERON:0002020;1.31e-14;34!UBERON:0002791;1.49e-14;32!UBERON:0002780;2.58e-14;41!UBERON:0001890;2.58e-14;41!UBERON:0002619;4.14e-14;22!UBERON:0000073;5.54e-13;53!UBERON:0002616;5.54e-13;53!UBERON:0001950;6.67e-13;20!UBERON:0000956;1.23e-12;25!UBERON:0000203;1.23e-12;25!UBERON:0000955;2.57e-10;68!UBERON:0001017;1.15e-09;75!UBERON:0001016;1.77e-08;83 | |||
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| ||
|short_description=p1@TMEM56 | |short_description=p1@TMEM56 | ||
}} | }} |
Latest revision as of 23:50, 19 September 2015
Short description: | p1@TMEM56 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM56_5end |
Coexpression cluster: | C2605_Reticulocytes_liver_Hepatocyte_retina_left_heart_gastrointestinal |
Association with transcript: | 0bp_to_ENST00000370203, ENST00000456991, NM_152487, uc001drb.2, uc001drc.2_5end |
EntrezGene: | TMEM56 |
HGNC: | 26477 |
UniProt: | Q96MV1C9JJM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data