FFCP PHASE1:Hg19::chr17:79952258..79952274,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:79952258..79952274,+ | |||
|coexpression_cluster_id=C42 | |coexpression_cluster_id=C42 | ||
|description=CAGE_peak_at_chr17:79952258..79952274,+ | |description=CAGE_peak_at_chr17:79952258..79952274,+ | ||
|id=chr17:79952258..79952274,+ | |id=chr17:79952258..79952274,+ | ||
|ontology_enrichment_celltype=CL:0000182;1.26e-37;12 | |ontology_enrichment_celltype=CL:0000181!1.81e-25!12;CL:0000417!1.81e-25!12;CL:0000668!1.81e-25!12;CL:0000414!1.81e-25!12;CL:0000412!1.81e-25!12;CL:0000182!1.81e-25!12;CL:0002178!3.24e-12!3;CL:0000223!1.63e-09!59 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;1.26e-37;12 | ||
|ontology_enrichment_disease=DOID:5409;8.82e-14;4!DOID:7;8.43e-13;39!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |ontology_enrichment_celltype_v019_2=CL:0000182,1.26e-37,12;CL:0000223,1.46e-08,58 | ||
|ontology_enrichment_uberon=UBERON:0002107;3.46e-24;19!UBERON:0006925;3.46e-24;19!UBERON:0002423;1.23e-18;25!UBERON:0002365;4.32e-14;31!UBERON:0002330;4.32e-14;31!UBERON:0002368;2.79e-13;33!UBERON:0000949;2.21e-10;43 | |ontology_enrichment_development_v019=UBERON:0004161;6.14e-41;11!UBERON:0009497;7.97e-35;13!UBERON:0001041;4.24e-27;30!UBERON:0003104;6.77e-15;31 | ||
|ontology_enrichment_disease=DOID:0050619!7.06e-34!1;DOID:1357!7.06e-34!1;DOID:3493!1.27e-17!2;DOID:5409!1.12e-09!4;DOID:0050615!2.77e-09!16;DOID:7!2.18e-08!39;DOID:305!3.05e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:5409;8.82e-14;4!DOID:7;8.43e-13;39!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.82e-14,4;DOID:7,2.67e-12,39;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:305,2.62e-08,106;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001764!7.06e-34!1;UBERON:0001825!7.06e-34!1;UBERON:0002107!2.05e-16!19;UBERON:0006925!2.05e-16!19;UBERON:0008836!2.05e-16!19;UBERON:0008835!2.73e-14!22;UBERON:0003894!2.73e-14!22;UBERON:0009854!1.05e-13!23;UBERON:0007499!1.13e-12!25;UBERON:0009497!1.13e-12!25;UBERON:0000015!1.13e-12!25;UBERON:0002423!1.13e-12!25;UBERON:0006235!1.13e-12!25;UBERON:0004161!1.13e-12!25;UBERON:0005057!3.25e-12!26;UBERON:0009856!3.25e-12!26;UBERON:0002365!2.29e-10!31;UBERON:0002330!2.29e-10!31;UBERON:0002368!2.89e-09!35;UBERON:0001041!6.96e-09!98;UBERON:0000949!2.33e-07!45;UBERON:0005911!5.11e-07!82;UBERON:0000466!5.41e-07!126;UBERON:0000077!8.79e-07!130;UBERON:0004921!8.79e-07!129;UBERON:0004185!8.79e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.46e-24;19!UBERON:0006925;3.46e-24;19!UBERON:0002423;1.23e-18;25!UBERON:0002365;4.32e-14;31!UBERON:0002330;4.32e-14;31!UBERON:0002368;2.79e-13;33!UBERON:0000949;2.21e-10;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.46e-24,19;UBERON:0006925,3.46e-24,19;UBERON:0008836,3.46e-24,19;UBERON:0008835,4.90e-21,22;UBERON:0003894,4.90e-21,22;UBERON:0009854,3.62e-20,23;UBERON:0007499,1.23e-18,25;UBERON:0009497,1.23e-18,25;UBERON:0000015,1.23e-18,25;UBERON:0002423,1.23e-18,25;UBERON:0006235,1.23e-18,25;UBERON:0004161,1.23e-18,25;UBERON:0009856,5.83e-18,26;UBERON:0002365,3.16e-15,31;UBERON:0002330,3.16e-15,31;UBERON:0002368,1.35e-13,35;UBERON:0000949,8.78e-11,45;UBERON:0005911,1.66e-10,82;UBERON:0001041,5.98e-10,87;UBERON:0003929,3.93e-09,54;UBERON:0005172,3.93e-09,54;UBERON:0005173,3.93e-09,54;UBERON:0005177,1.11e-08,101;UBERON:0002530,1.98e-08,59;UBERON:0002417,2.64e-08,60;UBERON:0000916,2.64e-08,60;UBERON:0009569,6.64e-08,112;UBERON:0004921,1.75e-07,118 | |||
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|short_description=p@chr17:79952258..79952274,+ | |short_description=p@chr17:79952258..79952274,+ | ||
}} | }} |
Latest revision as of 22:56, 25 July 2015
Short description: | p@chr17:79952258..79952274, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79952258..79952274, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.26e-37 | 12 |
endodermal cell | 1.46e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.46e-24 | 19 |
digestive gland | 3.46e-24 | 19 |
liver bud | 3.46e-24 | 19 |
hepatic diverticulum | 4.90e-21 | 22 |
liver primordium | 4.90e-21 | 22 |
digestive tract diverticulum | 3.62e-20 | 23 |
epithelial sac | 1.23e-18 | 25 |
epithelium of foregut-midgut junction | 1.23e-18 | 25 |
anatomical boundary | 1.23e-18 | 25 |
hepatobiliary system | 1.23e-18 | 25 |
foregut-midgut junction | 1.23e-18 | 25 |
septum transversum | 1.23e-18 | 25 |
sac | 5.83e-18 | 26 |
exocrine gland | 3.16e-15 | 31 |
exocrine system | 3.16e-15 | 31 |
endocrine gland | 1.35e-13 | 35 |
endocrine system | 8.78e-11 | 45 |
endo-epithelium | 1.66e-10 | 82 |
foregut | 5.98e-10 | 87 |
gut epithelium | 3.93e-09 | 54 |
abdomen element | 3.93e-09 | 54 |
abdominal segment element | 3.93e-09 | 54 |
trunk region element | 1.11e-08 | 101 |
gland | 1.98e-08 | 59 |
abdominal segment of trunk | 2.64e-08 | 60 |
abdomen | 2.64e-08 | 60 |
subdivision of trunk | 6.64e-08 | 112 |
subdivision of digestive tract | 1.75e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.82e-14 | 4 |
disease of anatomical entity | 2.67e-12 | 39 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
carcinoma | 2.62e-08 | 106 |
lung carcinoma | 7.48e-07 | 9 |