FFCP PHASE1:Hg19::chr1:207495013..207495037,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1604 | |EntrezGene=1604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2665 | |HGNC=2665 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2H0 | |UniProt=F5H2H0 | ||
|association_with_transcript=0bp_to_ENST00000367067,ENST00000488171,ENST00000536840_5end | |association_with_transcript=0bp_to_ENST00000367067,ENST00000488171,ENST00000536840_5end | ||
|cluster_id=chr1:207495013..207495037,+ | |||
|coexpression_cluster_id=C531 | |coexpression_cluster_id=C531 | ||
|description=CAGE_peak_1_at_CD55_5end | |description=CAGE_peak_1_at_CD55_5end | ||
|id=chr1:207495013..207495037,+ | |id=chr1:207495013..207495037,+ | ||
|ontology_enrichment_celltype=CL:0000860;3.39e-18;33!CL:0002057;3.39e-18;33!CL:0000473;1.24e-12;39!CL:0000234;1.24e-12;39!CL:0000576;4.69e-11;48!CL:0000766;1.21e-09;69 | |ontology_enrichment_celltype=CL:0000860!2.07e-25!45;CL:0002057!1.81e-23!42;CL:0000738!1.86e-20!140;CL:0000766!5.28e-19!76;CL:0000037!1.24e-17!172;CL:0000566!1.24e-17!172;CL:0002032!4.40e-17!165;CL:0000837!4.40e-17!165;CL:0002031!4.56e-16!124;CL:0000763!4.58e-16!112;CL:0000049!4.58e-16!112;CL:0000557!4.60e-16!71;CL:0000988!6.28e-16!182;CL:0000839!2.67e-15!70;CL:0002009!2.35e-14!65;CL:0002087!2.57e-14!119;CL:0002194!2.22e-13!63;CL:0000576!2.22e-13!63;CL:0000040!2.22e-13!63;CL:0000559!2.22e-13!63 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.39e-18;33!CL:0002057;3.39e-18;33!CL:0000473;1.24e-12;39!CL:0000234;1.24e-12;39!CL:0000576;4.69e-11;48!CL:0000766;1.21e-09;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.81e-23,42;CL:0002057,1.81e-23,42;CL:0000473,6.63e-20,48;CL:0000234,6.63e-20,48;CL:0000738,7.15e-19,136;CL:0000766,2.74e-17,72;CL:0000037,3.34e-16,168;CL:0002032,1.16e-15,161;CL:0000837,1.16e-15,161;CL:0002031,1.34e-14,120;CL:0000763,1.45e-14,108;CL:0000049,1.45e-14,108;CL:0000988,1.53e-14,177;CL:0000557,2.04e-14,67;CL:0000839,1.12e-13,66;CL:0002087,6.64e-13,115;CL:0002009,9.69e-13,61;CL:0002194,8.60e-12,59;CL:0000576,8.60e-12,59;CL:0000040,8.60e-12,59;CL:0000559,8.60e-12,59 | |||
|ontology_enrichment_development_v019=CL:0002057;3.81e-17;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001737;5.00e-07;9!UBERON:0001557;5.00e-07;9!UBERON:0000178;9.85e-07;15!UBERON:0000179;9.85e-07;15!UBERON:0000463;9.85e-07;15 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.29e-16!102;UBERON:0003061!2.29e-16!102;UBERON:0002193!1.42e-15!112;UBERON:0002371!5.68e-12!80;UBERON:0001474!2.10e-11!86;UBERON:0003081!7.76e-09!216;UBERON:0004765!1.23e-07!101;UBERON:0001434!1.23e-07!101;UBERON:0002405!1.51e-07!115;UBERON:0001737!4.99e-07!9;UBERON:0000178!9.88e-07!15;UBERON:0000179!9.88e-07!15;UBERON:0000463!9.88e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.00e-07;9!UBERON:0001557;5.00e-07;9!UBERON:0000178;9.85e-07;15!UBERON:0000179;9.85e-07;15!UBERON:0000463;9.85e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.99e-15,98;UBERON:0003061,7.99e-15,98;UBERON:0002193,4.32e-14,108;UBERON:0002371,1.57e-10,76;UBERON:0001474,5.13e-10,82;UBERON:0002405,1.22e-09,93;UBERON:0003081,1.54e-09,203;UBERON:0004765,8.80e-08,90;UBERON:0001737,4.98e-07,9;UBERON:0000178,9.88e-07,15;UBERON:0000179,9.88e-07,15;UBERON:0000463,9.88e-07,15 | |||
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| ||
|short_description=p1@CD55 | |short_description=p1@CD55 | ||
}} | }} |
Latest revision as of 07:35, 20 September 2015
Short description: | p1@CD55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD55_5end |
Coexpression cluster: | C531_Neutrophils_Eosinophils_large_CD14_rectal_epitheloid_Hep2 |
Association with transcript: | 0bp_to_ENST00000367067, ENST00000488171, ENST00000536840_5end |
EntrezGene: | CD55 |
HGNC: | 2665 |
UniProt: | F5H2H0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.81e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.81e-23 | 42 |
defensive cell | 6.63e-20 | 48 |
phagocyte | 6.63e-20 | 48 |
leukocyte | 7.15e-19 | 136 |
myeloid leukocyte | 2.74e-17 | 72 |
hematopoietic stem cell | 3.34e-16 | 168 |
hematopoietic oligopotent progenitor cell | 1.16e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 1.34e-14 | 120 |
myeloid cell | 1.45e-14 | 108 |
common myeloid progenitor | 1.45e-14 | 108 |
hematopoietic cell | 1.53e-14 | 177 |
granulocyte monocyte progenitor cell | 2.04e-14 | 67 |
myeloid lineage restricted progenitor cell | 1.12e-13 | 66 |
nongranular leukocyte | 6.64e-13 | 115 |
macrophage dendritic cell progenitor | 9.69e-13 | 61 |
monopoietic cell | 8.60e-12 | 59 |
monocyte | 8.60e-12 | 59 |
monoblast | 8.60e-12 | 59 |
promonocyte | 8.60e-12 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.99e-15 | 98 |
blood island | 7.99e-15 | 98 |
hemolymphoid system | 4.32e-14 | 108 |
bone marrow | 1.57e-10 | 76 |
bone element | 5.13e-10 | 82 |
immune system | 1.22e-09 | 93 |
lateral plate mesoderm | 1.54e-09 | 203 |
skeletal element | 8.80e-08 | 90 |
larynx | 4.98e-07 | 9 |
blood | 9.88e-07 | 15 |
haemolymphatic fluid | 9.88e-07 | 15 |
organism substance | 9.88e-07 | 15 |