FFCP PHASE1:Hg19::chr20:57576512..57576549,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:57576512..57576549,+ | |||
|coexpression_cluster_id=C71 | |coexpression_cluster_id=C71 | ||
|description=CAGE_peak_at_chr20:57576512..57576549,+ | |description=CAGE_peak_at_chr20:57576512..57576549,+ | ||
|id=chr20:57576512..57576549,+ | |id=chr20:57576512..57576549,+ | ||
|ontology_enrichment_celltype=CL:0000235;1.49e-24;6!CL:0002619;6.95e-13;3!CL:0002393;5.19e-10;6!CL:0002397;5.19e-10;6!CL:0000473;1.67e-08;39!CL:0000234;1.67e-08;39!CL:0002593;2.49e-08;2!CL:0000576;5.06e-07;48!CL:0000766;8.50e-07;69!CL:0000840;9.22e-07;5 | |ontology_enrichment_celltype=CL:0002009!1.76e-14!65;CL:0002194!1.10e-13!63;CL:0000576!1.10e-13!63;CL:0000040!1.10e-13!63;CL:0000559!1.10e-13!63;CL:0000557!1.53e-11!71;CL:0000839!3.00e-11!70;CL:0000766!6.45e-09!76;CL:0002057!2.31e-07!42;CL:0000860!9.56e-07!45 | ||
| | |ontology_enrichment_celltype_v019=CL:0000235;1.49e-24;6!CL:0002619;6.95e-13;3!CL:0002393;5.19e-10;6!CL:0002397;5.19e-10;6!CL:0000473;1.67e-08;39!CL:0000234;1.67e-08;39!CL:0002593;2.49e-08;2!CL:0000576;5.06e-07;48!CL:0000766;8.50e-07;69!CL:0000840;9.22e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.30e-26,59;CL:0000576,5.30e-26,59;CL:0000040,5.30e-26,59;CL:0000559,5.30e-26,59;CL:0002009,5.57e-25,61;CL:0000235,1.69e-24,6;CL:0000839,1.08e-22,66;CL:0000557,2.81e-22,67;CL:0000766,2.29e-20,72;CL:0000473,1.91e-14,48;CL:0000234,1.91e-14,48;CL:0002619,6.63e-13,3;CL:0000763,7.72e-12,108;CL:0000049,7.72e-12,108;CL:0002087,8.32e-11,115;CL:0002031,3.82e-10,120;CL:0000738,2.55e-09,136;CL:0002593,3.38e-08,2;CL:0000840,9.27e-07,5;CL:0001029,9.27e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002456;2.49e-08;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.33e-11!80;UBERON:0004765!9.17e-11!101;UBERON:0001434!9.17e-11!101;UBERON:0002193!9.40e-11!112;UBERON:0001474!1.42e-10!86;UBERON:0002390!1.76e-10!102;UBERON:0003061!1.76e-10!102;UBERON:0002204!4.09e-10!167;UBERON:0002405!2.08e-09!115;UBERON:0003081!2.79e-09!216;UBERON:0000926!1.50e-07!448;UBERON:0004120!1.50e-07!448;UBERON:0006603!1.50e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;2.49e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.66e-23,76;UBERON:0001474,5.99e-21,82;UBERON:0002405,1.44e-19,93;UBERON:0001434,1.78e-19,100;UBERON:0004765,1.42e-18,90;UBERON:0002390,2.74e-18,98;UBERON:0003061,2.74e-18,98;UBERON:0002193,1.30e-17,108;UBERON:0003081,7.40e-16,203;UBERON:0002204,4.19e-11,167;UBERON:0000926,2.09e-09,315;UBERON:0004120,2.09e-09,315;UBERON:0006603,2.09e-09,315;UBERON:0002456,3.38e-08,2 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0,1.02000345622126,0.313454721478088,0,0.547497700291537,0.251085279189606,0,0,0.0787107813136792,0,0,0.77408061658038,0,0,0,0.154934401160603,0.142169232487422,0,1.10799081706375,0,0.868043482863407,4.70222495903841,2.59114932815184,3.09090681161024,0.290796477559129,0.755751887377619,0.242584061187816,0.697287110717054,0.822335776043652,0.309706370895104,1.1507695692886,1.0246428261164,1.18241114944293,0.689491361473237,0,0,0.376484679085209,0,0.674170453335254,0.918251677112708,0,0,0.989553900560148,0.398927315243264,0,1.45104619314292,0,0.622822248995575,0.502497330513487,0.521482918420201,0.434377689410233,1.21079900526674,0,0,1.05627643155971,1.27562579979026,1.25795187305026,0.673971786878971,0.750884464207532,0,0,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.724232594804119,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,1.11235332835329,16.8764644700435,8.53235712766409,12.2321323677356,0.715471872916026,0.571994910780128,1.11437250398869,0.198762407366705,0,1.38856200643038,0.56530794192401,0.838998872419812,1.92582629358047,0.208994966536811,0,0,0,0.402829317109147,0,1.22031028774085,0,0.81014194788176,0.17859945656816,0,0.563057402416611,0,0,0.366403487860815,0,0,0,0.496971951695318,0.633152558322899,0,0,0,0,0,1.2333377420858,0,0.808264032418128,0,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.408308342509787,0.368502951935304,0.103325781175765,0,0.741800787835671,0,0.718618141816238,0.168336113954066,0,0,0,1.5324389789951,0.600952235626387,0.453728732640084,0.179389635688862,0.427114777637135,0.211931901159562,0.900273288253207,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0,0,0,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,1.28648187638577,0,0.928735856063958,0.721879481669586,0.591534000199219,0.505754070234305,0.482022059766964,0.992645754591546,0.871517776369625,1.18635309555548,0.404493924480493,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,1.03993478527958,0,0.463721619900307,0.234817388471643,0.144366447761074,0.462985512576611,0.761016608938393,0,0,9.1100292252337,2.10603838625314,11.4445994962321,0.93733833986777,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.253991577168676,0.381988425558278,0,0,0.616964956219941,0.600686115687835,0.285826432630578,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0.514414748524284,1.41849132023278,0,0.142977993658148,1.08524321078289,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0.099972991182057,13.378615870531,17.5789982001244,21.0833939483032,0,0,0,0.579125226670317,0.410952645100767,0.179060963239896,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,0.535286966391485,0.630809660135739,0.35142424497814,0,0,0,0,0.737476674166813,0.0868836144680828,0.391602314925481,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0.710246901252508,0,0,0.348631135379878,0.241718899183244,0.200506470303285,0.184161977871793,0.114814448164607,0,0.262248829918848,0,0.15403067420883,0,0,0,0,0.680374821106063,0,1.54227252690289,0.270946437543853,1.00337954770971,0.254876273045038,0,0.671624264166535,0,0.784306353074702,0,0.656029291399411,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0.616194468458578,0.15350367472613,0.137836572484531,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0.571890581771475,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,1.21856744815642,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0.655894752046633,0.405820753925408,0.6196469961995,0.845086807596724,0,0.196498082026242,0.35667105148125,0,1.26664581178598,0.658589785919804,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0,0,0,0.371606350251437,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0.166849141711909,0.781552381608161,0,0,0,0,0,0.37428108081644,0,0,0.111443384277478,0.284136146806413,0.95497793895076,0,0.307160702099232,0,0,0.111308705022906,0.16480387422676,0,0.796991953004279,0,0,0.20453736500431,0,0.311039587661807,0.089868351147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| ||
|short_description=p@chr20:57576512..57576549,+ | |short_description=p@chr20:57576512..57576549,+ | ||
}} | }} |
Latest revision as of 15:53, 28 July 2015
Short description: | p@chr20:57576512..57576549, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:57576512..57576549, + |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 5.30e-26 | 59 |
monocyte | 5.30e-26 | 59 |
monoblast | 5.30e-26 | 59 |
promonocyte | 5.30e-26 | 59 |
macrophage dendritic cell progenitor | 5.57e-25 | 61 |
macrophage | 1.69e-24 | 6 |
myeloid lineage restricted progenitor cell | 1.08e-22 | 66 |
granulocyte monocyte progenitor cell | 2.81e-22 | 67 |
myeloid leukocyte | 2.29e-20 | 72 |
defensive cell | 1.91e-14 | 48 |
phagocyte | 1.91e-14 | 48 |
adult endothelial progenitor cell | 6.63e-13 | 3 |
myeloid cell | 7.72e-12 | 108 |
common myeloid progenitor | 7.72e-12 | 108 |
nongranular leukocyte | 8.32e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 3.82e-10 | 120 |
leukocyte | 2.55e-09 | 136 |
smooth muscle cell of the internal thoracic artery | 3.38e-08 | 2 |
immature conventional dendritic cell | 9.27e-07 | 5 |
common dendritic progenitor | 9.27e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.66e-23 | 76 |
bone element | 5.99e-21 | 82 |
immune system | 1.44e-19 | 93 |
skeletal system | 1.78e-19 | 100 |
skeletal element | 1.42e-18 | 90 |
hematopoietic system | 2.74e-18 | 98 |
blood island | 2.74e-18 | 98 |
hemolymphoid system | 1.30e-17 | 108 |
lateral plate mesoderm | 7.40e-16 | 203 |
musculoskeletal system | 4.19e-11 | 167 |
mesoderm | 2.09e-09 | 315 |
mesoderm-derived structure | 2.09e-09 | 315 |
presumptive mesoderm | 2.09e-09 | 315 |
internal thoracic artery | 3.38e-08 | 2 |