FFCP PHASE1:Hg19::chr17:80851254..80851295,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6904 | |EntrezGene=6904 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11581 | |HGNC=11581 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-125bp_to_BC150142_5end | |association_with_transcript=-125bp_to_BC150142_5end | ||
|cluster_id=chr17:80851254..80851295,+ | |||
|coexpression_cluster_id=C388 | |coexpression_cluster_id=C388 | ||
|description=CAGE_peak_3_at_TBCD_5end | |description=CAGE_peak_3_at_TBCD_5end | ||
|id=chr17:80851254..80851295,+ | |id=chr17:80851254..80851295,+ | ||
|ontology_enrichment_celltype=CL:0000624;7.52e-44;6!CL:0000898;1.57e-32;3!CL:0000815;1.08e-22;2!CL:0000792;1.08e-22;2!CL:0002677;1.08e-22;2!CL:0000791;1.25e-14;18!CL:0000789;1.25e-14;18!CL:0002419;1.25e-14;18!CL:0000895;1.19e-11;1!CL:0000084;1.65e-10;25 | |ontology_enrichment_celltype=CL:0000624!4.24e-16!6;CL:0002087!1.66e-13!119;CL:0002031!1.43e-11!124;CL:0000738!4.30e-11!140;CL:0000791!3.94e-10!18;CL:0000789!3.94e-10!18;CL:0002420!3.94e-10!18;CL:0002419!3.94e-10!18;CL:0000790!3.94e-10!18;CL:0000898!3.17e-09!3;CL:0000037!7.81e-09!172;CL:0000566!7.81e-09!172;CL:0000838!1.90e-08!52;CL:0000084!2.98e-08!25;CL:0000827!2.98e-08!25;CL:0000623!3.15e-08!3;CL:0000825!3.15e-08!3;CL:0000542!3.24e-08!53;CL:0000051!3.24e-08!53;CL:0002057!4.34e-08!42;CL:0002032!4.45e-08!165;CL:0000837!4.45e-08!165;CL:0000988!6.91e-08!182;CL:0000860!2.44e-07!45;CL:0000815!8.78e-07!2;CL:0000792!8.78e-07!2;CL:0002677!8.78e-07!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0000624;7.52e-44;6!CL:0000898;1.57e-32;3!CL:0000815;1.08e-22;2!CL:0000792;1.08e-22;2!CL:0002677;1.08e-22;2!CL:0000791;1.25e-14;18!CL:0000789;1.25e-14;18!CL:0002419;1.25e-14;18!CL:0000895;1.19e-11;1!CL:0000084;1.65e-10;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,7.53e-44,6;CL:0000898,1.41e-32,3;CL:0000815,1.08e-22,2;CL:0000792,1.08e-22,2;CL:0002677,1.08e-22,2;CL:0000791,1.25e-14,18;CL:0000789,1.25e-14,18;CL:0002420,1.25e-14,18;CL:0002419,1.25e-14,18;CL:0000790,1.25e-14,18;CL:0000810,1.07e-11,1;CL:0000895,1.07e-11,1;CL:0002436,1.07e-11,1;CL:0002427,1.07e-11,1;CL:0002428,1.07e-11,1;CL:0002429,1.07e-11,1;CL:0002433,1.07e-11,1;CL:0002431,1.07e-11,1;CL:0002432,1.07e-11,1;CL:0000084,1.65e-10,25;CL:0000827,1.65e-10,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.25e-14;18!CL:0002427;1.19e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.04e-09!7;UBERON:0002193!5.06e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@TBCD | |short_description=p3@TBCD | ||
}} | }} |
Latest revision as of 14:20, 18 September 2015
Short description: | p3@TBCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TBCD_5end |
Coexpression cluster: | C388_CD4_CD8_cord_Peripheral_Natural_Whole_thymus |
Association with transcript: | -125bp_to_BC150142_5end |
EntrezGene: | TBCD |
HGNC: | 11581 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 7.53e-44 | 6 |
naive T cell | 1.41e-32 | 3 |
regulatory T cell | 1.08e-22 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.08e-22 | 2 |
naive regulatory T cell | 1.08e-22 | 2 |
mature alpha-beta T cell | 1.25e-14 | 18 |
alpha-beta T cell | 1.25e-14 | 18 |
immature T cell | 1.25e-14 | 18 |
mature T cell | 1.25e-14 | 18 |
immature alpha-beta T cell | 1.25e-14 | 18 |
CD4-positive, alpha-beta thymocyte | 1.07e-11 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.07e-11 | 1 |
mature CD4 single-positive thymocyte | 1.07e-11 | 1 |
resting double-positive thymocyte | 1.07e-11 | 1 |
double-positive blast | 1.07e-11 | 1 |
CD69-positive double-positive thymocyte | 1.07e-11 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.07e-11 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.07e-11 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.07e-11 | 1 |
T cell | 1.65e-10 | 25 |
pro-T cell | 1.65e-10 | 25 |