FFCP PHASE1:Hg19::chr1:158656470..158656481,-: Difference between revisions
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|id=chr1:158656470..158656481,-
|short_description=p4@SPTA1
|description=CAGE_peak_4_at_SPTA1_5end
|association_with_transcript=6bp_to_ENST00000368148_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6708 | |EntrezGene=6708 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11272 | |HGNC=11272 | ||
|TSSclassifier=strong | |||
|UniProt=P02549 | |UniProt=P02549 | ||
|association_with_transcript=6bp_to_ENST00000368148_5end | |||
|cluster_id=chr1:158656470..158656481,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_4_at_SPTA1_5end | |||
|id=chr1:158656470..158656481,- | |||
|ontology_enrichment_celltype=CL:0000764!8.78e-12!2;CL:0000765!8.78e-12!2;CL:0000050!8.78e-12!2;CL:0000038!8.78e-12!2;CL:0000558!8.78e-12!2;CL:0000547!8.78e-12!2;CL:0000549!8.78e-12!2;CL:0000550!8.78e-12!2;CL:0000552!8.78e-12!2;CL:0000763!4.07e-09!112;CL:0000049!4.07e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.44e-25;2!CL:0000558;3.44e-25;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.44e-25,2;CL:0000765,3.44e-25,2;CL:0000050,3.44e-25,2;CL:0000038,3.44e-25,2;CL:0000558,3.44e-25,2;CL:0000547,3.44e-25,2;CL:0000549,3.44e-25,2;CL:0000550,3.44e-25,2;CL:0000552,3.44e-25,2;CL:0000763,1.11e-11,108;CL:0000049,1.11e-11,108;CL:0002032,2.31e-07,161;CL:0000837,2.31e-07,161;CL:0000037,5.39e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!9.70e-23!8;DOID:8692!6.90e-18!31;DOID:1240!9.26e-14!39;DOID:2531!5.27e-10!51;DOID:0060083!5.27e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;6.82e-37;8!DOID:8692;1.02e-28;31!DOID:1240;1.16e-19;39!DOID:2531;2.19e-13;51!DOID:0060083;2.19e-13;51!DOID:8552;5.38e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.35e-37,8;DOID:8692,1.32e-29,31;DOID:1240,2.45e-23,39;DOID:2531,1.30e-17,51;DOID:0060083,1.30e-17,51;DOID:8552,5.38e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.69e-15!15;UBERON:0000179!2.69e-15!15;UBERON:0000463!2.69e-15!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.80e-07;15!UBERON:0000179;1.80e-07;15!UBERON:0000463;1.80e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.92e-07,15;UBERON:0000179,1.92e-07,15;UBERON:0000463,1.92e-07,15 | |||
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|short_description=p4@SPTA1 | |||
}} | }} |
Latest revision as of 21:34, 17 September 2015
Short description: | p4@SPTA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPTA1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 6bp_to_ENST00000368148_5end |
EntrezGene: | SPTA1 |
HGNC: | 11272 |
UniProt: | P02549 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.44e-25 | 2 |
erythroblast | 3.44e-25 | 2 |
megakaryocyte-erythroid progenitor cell | 3.44e-25 | 2 |
erythroid progenitor cell | 3.44e-25 | 2 |
reticulocyte | 3.44e-25 | 2 |
proerythroblast | 3.44e-25 | 2 |
basophilic erythroblast | 3.44e-25 | 2 |
polychromatophilic erythroblast | 3.44e-25 | 2 |
orthochromatic erythroblast | 3.44e-25 | 2 |
myeloid cell | 1.11e-11 | 108 |
common myeloid progenitor | 1.11e-11 | 108 |
hematopoietic oligopotent progenitor cell | 2.31e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.31e-07 | 161 |
hematopoietic stem cell | 5.39e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 1.92e-07 | 15 |
haemolymphatic fluid | 1.92e-07 | 15 |
organism substance | 1.92e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.35e-37 | 8 |
myeloid leukemia | 1.32e-29 | 31 |
leukemia | 2.45e-23 | 39 |
hematologic cancer | 1.30e-17 | 51 |
immune system cancer | 1.30e-17 | 51 |
chronic myeloid leukemia | 5.38e-13 | 1 |