FFCP PHASE1:Hg19::chr8:65492433..65492440,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27319 | |EntrezGene=27319 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11963 | |HGNC=11963 | ||
|TSSclassifier=strong | |||
|UniProt=B4DF88,Q8NFJ8 | |UniProt=B4DF88,Q8NFJ8 | ||
|association_with_transcript=-354bp_to_NM_152414_5end | |association_with_transcript=-354bp_to_NM_152414_5end | ||
|cluster_id=chr8:65492433..65492440,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_6_at_BHLHE22_5end | |description=CAGE_peak_6_at_BHLHE22_5end | ||
|id=chr8:65492433..65492440,+ | |id=chr8:65492433..65492440,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.37e-12!42;CL:0000860!1.94e-11!45;CL:0002194!9.98e-09!63;CL:0000576!9.98e-09!63;CL:0000040!9.98e-09!63;CL:0000559!9.98e-09!63;CL:0002009!2.58e-08!65;CL:0000839!2.91e-08!70;CL:0000766!4.00e-08!76;CL:0000557!4.45e-08!71;CL:0002087!4.62e-07!119;CL:0000738!8.78e-07!140 | |ontology_enrichment_celltype=CL:0002057!1.37e-12!42;CL:0000860!1.94e-11!45;CL:0002194!9.98e-09!63;CL:0000576!9.98e-09!63;CL:0000040!9.98e-09!63;CL:0000559!9.98e-09!63;CL:0002009!2.58e-08!65;CL:0000839!2.91e-08!70;CL:0000766!4.00e-08!76;CL:0000557!4.45e-08!71;CL:0002087!4.62e-07!119;CL:0000738!8.78e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.83e-22;33!CL:0002057;9.83e-22;33!CL:0000473;4.57e-15;39!CL:0000234;4.57e-15;39!CL:0000576;2.59e-11;48!CL:0000766;1.76e-08;69!CL:0002087;5.20e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.14e-26,42;CL:0002057,6.14e-26,42;CL:0000473,2.18e-22,48;CL:0000234,2.18e-22,48;CL:0002194,2.05e-17,59;CL:0000576,2.05e-17,59;CL:0000040,2.05e-17,59;CL:0000559,2.05e-17,59;CL:0002009,8.98e-17,61;CL:0000839,2.45e-15,66;CL:0000557,4.49e-15,67;CL:0000766,7.14e-14,72;CL:0002087,2.68e-12,115;CL:0002031,1.16e-11,120;CL:0000738,6.19e-10,136;CL:0000763,1.76e-08,108;CL:0000049,1.76e-08,108;CL:0000047,2.62e-08,8;CL:0002032,6.34e-08,161;CL:0000837,6.34e-08,161;CL:0000037,1.81e-07,168;CL:0000988,6.15e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.57e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002021;9.09e-22;5!UBERON:0001950;3.68e-11;20!UBERON:0002619;3.80e-10;22!UBERON:0000956;6.43e-09;25!UBERON:0000203;6.43e-09;25!UBERON:0002902;5.24e-08;1!UBERON:0009899;5.24e-08;1 | |||
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| ||
|short_description=p6@BHLHE22 | |short_description=p6@BHLHE22 | ||
}} | }} |
Latest revision as of 19:18, 18 September 2015
Short description: | p6@BHLHE22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BHLHE22_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -354bp_to_NM_152414_5end |
EntrezGene: | BHLHE22 |
HGNC: | 11963 |
UniProt: | B4DF88Q8NFJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.14e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.14e-26 | 42 |
defensive cell | 2.18e-22 | 48 |
phagocyte | 2.18e-22 | 48 |
monopoietic cell | 2.05e-17 | 59 |
monocyte | 2.05e-17 | 59 |
monoblast | 2.05e-17 | 59 |
promonocyte | 2.05e-17 | 59 |
macrophage dendritic cell progenitor | 8.98e-17 | 61 |
myeloid lineage restricted progenitor cell | 2.45e-15 | 66 |
granulocyte monocyte progenitor cell | 4.49e-15 | 67 |
myeloid leukocyte | 7.14e-14 | 72 |
nongranular leukocyte | 2.68e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.16e-11 | 120 |
leukocyte | 6.19e-10 | 136 |
myeloid cell | 1.76e-08 | 108 |
common myeloid progenitor | 1.76e-08 | 108 |
neuronal stem cell | 2.62e-08 | 8 |
hematopoietic oligopotent progenitor cell | 6.34e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.34e-08 | 161 |
hematopoietic stem cell | 1.81e-07 | 168 |
hematopoietic cell | 6.15e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 8.38e-22 | 5 |
bone marrow | 5.05e-13 | 76 |
bone element | 6.65e-12 | 82 |
neocortex | 3.86e-11 | 20 |
skeletal element | 1.22e-10 | 90 |
immune system | 3.19e-10 | 93 |
regional part of cerebral cortex | 3.96e-10 | 22 |
hematopoietic system | 1.39e-09 | 98 |
blood island | 1.39e-09 | 98 |
skeletal system | 2.41e-09 | 100 |
cerebral cortex | 6.68e-09 | 25 |
pallium | 6.68e-09 | 25 |
hemolymphoid system | 1.76e-08 | 108 |
nervous system | 1.79e-08 | 89 |
central nervous system | 5.37e-08 | 81 |
occipital pole | 6.68e-08 | 1 |
pole of cerebral hemisphere | 6.68e-08 | 1 |
regional part of telencephalon | 6.63e-07 | 32 |
cerebral hemisphere | 6.63e-07 | 32 |