FFCP PHASE1:Hg19::chr16:30195571..30195586,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:30195571..30195586,+ | |||
|coexpression_cluster_id=C2151 | |coexpression_cluster_id=C2151 | ||
|description=CAGE_peak_at_chr16:30195571..30195586,+ | |description=CAGE_peak_at_chr16:30195571..30195586,+ | ||
|id=chr16:30195571..30195586,+ | |id=chr16:30195571..30195586,+ | ||
|ontology_enrichment_celltype=CL:0000037!6.65e-76!172;CL:0000566!6.65e-76!172;CL:0000988!3.34e-73!182;CL:0000738!1.99e-69!140;CL:0002032!9.40e-69!165;CL:0000837!9.40e-69!165;CL:0002087!2.04e-59!119;CL:0002031!1.88e-57!124;CL:0000542!1.12e-47!53;CL:0000051!1.12e-47!53;CL:0000838!4.05e-47!52;CL:0000763!1.24e-24!112;CL:0000049!1.24e-24!112;CL:0000945!7.44e-23!24;CL:0000826!7.44e-23!24;CL:0000084!7.14e-22!25;CL:0000827!7.14e-22!25;CL:0000791!7.91e-21!18;CL:0000789!7.91e-21!18;CL:0002420!7.91e-21!18;CL:0002419!7.91e-21!18;CL:0000790!7.91e-21!18;CL:0000766!9.73e-19!76;CL:0000134!3.43e-16!358;CL:0000839!2.16e-15!70;CL:0000236!2.60e-15!14;CL:0002320!3.23e-15!365;CL:0002057!4.09e-15!42;CL:0000557!3.63e-14!71;CL:0002009!4.46e-14!65;CL:0002194!6.37e-14!63;CL:0000576!6.37e-14!63;CL:0000040!6.37e-14!63;CL:0000559!6.37e-14!63;CL:0000625!1.50e-13!11;CL:0000860!1.79e-13!45;CL:0000219!7.26e-12!390;CL:0000048!9.43e-09!430;CL:0002393!2.65e-08!9;CL:0002397!2.65e-08!9;CL:0000034!3.09e-08!444;CL:0000723!3.23e-08!436;CL:0000624!5.88e-08!6 | |ontology_enrichment_celltype=CL:0000037!6.65e-76!172;CL:0000566!6.65e-76!172;CL:0000988!3.34e-73!182;CL:0000738!1.99e-69!140;CL:0002032!9.40e-69!165;CL:0000837!9.40e-69!165;CL:0002087!2.04e-59!119;CL:0002031!1.88e-57!124;CL:0000542!1.12e-47!53;CL:0000051!1.12e-47!53;CL:0000838!4.05e-47!52;CL:0000763!1.24e-24!112;CL:0000049!1.24e-24!112;CL:0000945!7.44e-23!24;CL:0000826!7.44e-23!24;CL:0000084!7.14e-22!25;CL:0000827!7.14e-22!25;CL:0000791!7.91e-21!18;CL:0000789!7.91e-21!18;CL:0002420!7.91e-21!18;CL:0002419!7.91e-21!18;CL:0000790!7.91e-21!18;CL:0000766!9.73e-19!76;CL:0000134!3.43e-16!358;CL:0000839!2.16e-15!70;CL:0000236!2.60e-15!14;CL:0002320!3.23e-15!365;CL:0002057!4.09e-15!42;CL:0000557!3.63e-14!71;CL:0002009!4.46e-14!65;CL:0002194!6.37e-14!63;CL:0000576!6.37e-14!63;CL:0000040!6.37e-14!63;CL:0000559!6.37e-14!63;CL:0000625!1.50e-13!11;CL:0000860!1.79e-13!45;CL:0000219!7.26e-12!390;CL:0000048!9.43e-09!430;CL:0002393!2.65e-08!9;CL:0002397!2.65e-08!9;CL:0000034!3.09e-08!444;CL:0000723!3.23e-08!436;CL:0000624!5.88e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000542;7.63e-32;53!CL:0000791;1.29e-31;18!CL:0000789;1.29e-31;18!CL:0002419;1.29e-31;18!CL:0000084;2.94e-29;25!CL:0000945;8.04e-23;24!CL:0000625;2.88e-20;11!CL:0000236;9.55e-17;13!CL:0002087;5.18e-13;104!CL:0000624;1.61e-11;6!CL:0000738;2.45e-10;136!CL:0000988;7.10e-08;177!CL:0000094;9.74e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.74e-56,52;CL:0000542,5.85e-55,53;CL:0000051,5.85e-55,53;CL:0000738,3.25e-48,136;CL:0000037,1.01e-44,168;CL:0002087,3.80e-43,115;CL:0000988,2.31e-41,177;CL:0002032,2.07e-38,161;CL:0000837,2.07e-38,161;CL:0002031,7.91e-36,120;CL:0000791,1.24e-31,18;CL:0000789,1.24e-31,18;CL:0002420,1.24e-31,18;CL:0002419,1.24e-31,18;CL:0000790,1.24e-31,18;CL:0000084,3.03e-29,25;CL:0000827,3.03e-29,25;CL:0000945,5.41e-23,24;CL:0000826,5.41e-23,24;CL:0000625,2.97e-20,11;CL:0000236,4.42e-18,14;CL:0000624,1.56e-11,6;CL:0000134,1.39e-10,354;CL:0002320,5.08e-10,361;CL:0000219,4.46e-08,386;CL:0000094,8.53e-08,8;CL:0002393,8.89e-08,9;CL:0002397,8.89e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000051;7.63e-32;53!CL:0000790;1.29e-31;18 | |||
|ontology_enrichment_disease=DOID:2531!3.25e-14!51;DOID:0060083!3.25e-14!51;DOID:1240!3.29e-10!39;DOID:0060058!4.28e-07!10;DOID:8692!8.21e-07!31 | |ontology_enrichment_disease=DOID:2531!3.25e-14!51;DOID:0060083!3.25e-14!51;DOID:1240!3.29e-10!39;DOID:0060058!4.28e-07!10;DOID:8692!8.21e-07!31 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.95e-28!102;UBERON:0003061!8.95e-28!102;UBERON:0002193!1.42e-25!112;UBERON:0000178!4.51e-15!15;UBERON:0000179!4.51e-15!15;UBERON:0000463!4.51e-15!15;UBERON:0002384!6.65e-14!375;UBERON:0002371!6.87e-13!80;UBERON:0002405!2.95e-11!115;UBERON:0001474!3.94e-11!86;UBERON:0004765!8.87e-08!101;UBERON:0001434!8.87e-08!101;UBERON:0004177!3.65e-07!7 | |ontology_enrichment_uberon=UBERON:0002390!8.95e-28!102;UBERON:0003061!8.95e-28!102;UBERON:0002193!1.42e-25!112;UBERON:0000178!4.51e-15!15;UBERON:0000179!4.51e-15!15;UBERON:0000463!4.51e-15!15;UBERON:0002384!6.65e-14!375;UBERON:0002371!6.87e-13!80;UBERON:0002405!2.95e-11!115;UBERON:0001474!3.94e-11!86;UBERON:0004765!8.87e-08!101;UBERON:0001434!8.87e-08!101;UBERON:0004177!3.65e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.91e-16;15!UBERON:0000179;4.91e-16;15!UBERON:0000463;4.91e-16;15!UBERON:0002390;8.28e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.82e-16,15;UBERON:0000179,4.82e-16,15;UBERON:0000463,4.82e-16,15;UBERON:0002390,1.89e-10,98;UBERON:0003061,1.89e-10,98;UBERON:0002193,3.24e-10,108;UBERON:0002384,2.92e-09,371;UBERON:0002370,4.52e-07,4;UBERON:0005058,4.52e-07,4;UBERON:0009113,4.52e-07,4;UBERON:0003295,4.52e-07,4;UBERON:0005562,4.52e-07,4 | |||
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|short_description=p@chr16:30195571..30195586,+ | |short_description=p@chr16:30195571..30195586,+ | ||
}} | }} |
Latest revision as of 08:07, 25 July 2015
Short description: | p@chr16:30195571..30195586, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:30195571..30195586, + |
Coexpression cluster: | C2151_CD4_CD19_CD8_Whole_Dendritic_Neutrophils_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.74e-56 | 52 |
lymphocyte | 5.85e-55 | 53 |
common lymphoid progenitor | 5.85e-55 | 53 |
leukocyte | 3.25e-48 | 136 |
hematopoietic stem cell | 1.01e-44 | 168 |
nongranular leukocyte | 3.80e-43 | 115 |
hematopoietic cell | 2.31e-41 | 177 |
hematopoietic oligopotent progenitor cell | 2.07e-38 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-38 | 161 |
hematopoietic lineage restricted progenitor cell | 7.91e-36 | 120 |
mature alpha-beta T cell | 1.24e-31 | 18 |
alpha-beta T cell | 1.24e-31 | 18 |
immature T cell | 1.24e-31 | 18 |
mature T cell | 1.24e-31 | 18 |
immature alpha-beta T cell | 1.24e-31 | 18 |
T cell | 3.03e-29 | 25 |
pro-T cell | 3.03e-29 | 25 |
lymphocyte of B lineage | 5.41e-23 | 24 |
pro-B cell | 5.41e-23 | 24 |
CD8-positive, alpha-beta T cell | 2.97e-20 | 11 |
B cell | 4.42e-18 | 14 |
CD4-positive, alpha-beta T cell | 1.56e-11 | 6 |
mesenchymal cell | 1.39e-10 | 354 |
connective tissue cell | 5.08e-10 | 361 |
motile cell | 4.46e-08 | 386 |
granulocyte | 8.53e-08 | 8 |
intermediate monocyte | 8.89e-08 | 9 |
CD14-positive, CD16-positive monocyte | 8.89e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
blood | 4.82e-16 | 15 |
haemolymphatic fluid | 4.82e-16 | 15 |
organism substance | 4.82e-16 | 15 |
hematopoietic system | 1.89e-10 | 98 |
blood island | 1.89e-10 | 98 |
hemolymphoid system | 3.24e-10 | 108 |
connective tissue | 2.92e-09 | 371 |
thymus | 4.52e-07 | 4 |
hemolymphoid system gland | 4.52e-07 | 4 |
thymic region | 4.52e-07 | 4 |
pharyngeal gland | 4.52e-07 | 4 |
thymus primordium | 4.52e-07 | 4 |