FFCP PHASE1:Hg19::chr12:123320100..123320107,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9026 | |EntrezGene=9026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18415 | |HGNC=18415 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=72bp_to_ENST00000452196_5end | |association_with_transcript=72bp_to_ENST00000452196_5end | ||
|cluster_id=chr12:123320100..123320107,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_7_at_HIP1R_5end | |description=CAGE_peak_7_at_HIP1R_5end | ||
|id=chr12:123320100..123320107,+ | |id=chr12:123320100..123320107,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.55e-16;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.34e-21!57;UBERON:0005068!5.34e-21!57;UBERON:0006241!5.34e-21!57;UBERON:0007135!5.34e-21!57;UBERON:0002616!1.82e-18!59;UBERON:0001017!2.16e-18!82;UBERON:0007023!2.32e-18!115;UBERON:0002780!6.05e-18!41;UBERON:0001890!6.05e-18!41;UBERON:0006240!6.05e-18!41;UBERON:0000955!1.54e-17!69;UBERON:0006238!1.54e-17!69;UBERON:0003080!2.54e-17!42;UBERON:0005743!5.92e-17!86;UBERON:0000073!4.07e-16!94;UBERON:0001016!4.07e-16!94;UBERON:0001893!4.16e-14!34;UBERON:0002020!1.27e-13!34;UBERON:0003528!1.27e-13!34;UBERON:0002791!4.04e-13!33;UBERON:0003075!3.02e-12!86;UBERON:0007284!3.02e-12!86;UBERON:0002346!5.48e-12!90;UBERON:0001869!5.67e-12!32;UBERON:0000153!3.94e-11!129;UBERON:0007811!3.94e-11!129;UBERON:0000033!4.80e-11!123;UBERON:0002619!5.89e-11!22;UBERON:0001950!1.38e-10!20;UBERON:0003056!1.83e-10!61;UBERON:0004121!2.02e-10!169;UBERON:0000924!2.23e-10!173;UBERON:0006601!2.23e-10!173;UBERON:0000956!3.44e-09!25;UBERON:0000203!3.44e-09!25;UBERON:0002298!9.56e-09!8;UBERON:0004111!3.98e-07!241 | |ontology_enrichment_uberon=UBERON:0001049!5.34e-21!57;UBERON:0005068!5.34e-21!57;UBERON:0006241!5.34e-21!57;UBERON:0007135!5.34e-21!57;UBERON:0002616!1.82e-18!59;UBERON:0001017!2.16e-18!82;UBERON:0007023!2.32e-18!115;UBERON:0002780!6.05e-18!41;UBERON:0001890!6.05e-18!41;UBERON:0006240!6.05e-18!41;UBERON:0000955!1.54e-17!69;UBERON:0006238!1.54e-17!69;UBERON:0003080!2.54e-17!42;UBERON:0005743!5.92e-17!86;UBERON:0000073!4.07e-16!94;UBERON:0001016!4.07e-16!94;UBERON:0001893!4.16e-14!34;UBERON:0002020!1.27e-13!34;UBERON:0003528!1.27e-13!34;UBERON:0002791!4.04e-13!33;UBERON:0003075!3.02e-12!86;UBERON:0007284!3.02e-12!86;UBERON:0002346!5.48e-12!90;UBERON:0001869!5.67e-12!32;UBERON:0000153!3.94e-11!129;UBERON:0007811!3.94e-11!129;UBERON:0000033!4.80e-11!123;UBERON:0002619!5.89e-11!22;UBERON:0001950!1.38e-10!20;UBERON:0003056!1.83e-10!61;UBERON:0004121!2.02e-10!169;UBERON:0000924!2.23e-10!173;UBERON:0006601!2.23e-10!173;UBERON:0000956!3.44e-09!25;UBERON:0000203!3.44e-09!25;UBERON:0002298!9.56e-09!8;UBERON:0004111!3.98e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0005162;1.15e-29;2!UBERON:0000122;1.15e-29;2!UBERON:0000941;5.55e-16;1!UBERON:0001785;5.55e-16;1!UBERON:0002464;5.55e-16;1!UBERON:0004904;5.55e-16;1!UBERON:0001021;5.55e-16;1!UBERON:0002336;1.66e-15;1!UBERON:0011215;1.66e-15;1!UBERON:0001018;1.66e-15;1!UBERON:0002473;1.66e-15;1!UBERON:0005340;1.66e-15;1!UBERON:0003544;1.66e-15;1!UBERON:0005970;1.66e-15;1!UBERON:0002316;1.66e-15;1!UBERON:0001020;1.66e-15;1!UBERON:0002437;1.66e-15;1!UBERON:0003714;1.20e-08;2!UBERON:0001897;2.07e-08;2!UBERON:0010225;2.07e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,2.56e-29,2;UBERON:0000122,2.56e-29,2;UBERON:0000941,5.56e-16,1;UBERON:0001785,5.56e-16,1;UBERON:0002464,5.56e-16,1;UBERON:0004904,5.56e-16,1;UBERON:0001021,5.56e-16,1;UBERON:0003902,5.56e-16,1;UBERON:0005425,5.56e-16,1;UBERON:0002336,3.66e-15,1;UBERON:0011215,3.66e-15,1;UBERON:0001018,3.66e-15,1;UBERON:0002473,3.66e-15,1;UBERON:0005340,3.66e-15,1;UBERON:0003544,3.66e-15,1;UBERON:0005970,3.66e-15,1;UBERON:0002316,3.66e-15,1;UBERON:0001020,3.66e-15,1;UBERON:0002437,3.66e-15,1;UBERON:0003714,1.20e-08,2;UBERON:0001897,1.50e-08,2;UBERON:0010225,1.50e-08,2 | |||
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| ||
|short_description=p7@HIP1R | |short_description=p7@HIP1R | ||
}} | }} |
Latest revision as of 00:43, 17 September 2015
Short description: | p7@HIP1R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HIP1R_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 72bp_to_ENST00000452196_5end |
EntrezGene: | HIP1R |
HGNC: | 18415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 2.56e-29 | 2 |
neuron projection bundle | 2.56e-29 | 2 |
cranial nerve II | 5.56e-16 | 1 |
cranial nerve | 5.56e-16 | 1 |
nerve trunk | 5.56e-16 | 1 |
nerve connecting eye with brain | 5.56e-16 | 1 |
nerve | 5.56e-16 | 1 |
retinal neural layer | 5.56e-16 | 1 |
presumptive neural retina | 5.56e-16 | 1 |
corpus callosum | 3.66e-15 | 1 |
central nervous system cell part cluster | 3.66e-15 | 1 |
axon tract | 3.66e-15 | 1 |
intercerebral commissure | 3.66e-15 | 1 |
dorsal telencephalic commissure | 3.66e-15 | 1 |
brain white matter | 3.66e-15 | 1 |
brain commissure | 3.66e-15 | 1 |
white matter | 3.66e-15 | 1 |
nervous system commissure | 3.66e-15 | 1 |
cerebral hemisphere white matter | 3.66e-15 | 1 |
neural tissue | 1.20e-08 | 2 |
dorsal plus ventral thalamus | 1.50e-08 | 2 |
thalamic complex | 1.50e-08 | 2 |