FFCP PHASE1:Hg19::chr19:55720826..55720849,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5794 | |EntrezGene=5794 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9672 | |HGNC=9672 | ||
|TSSclassifier=strong | |||
|UniProt=C9JCH2,Q9HD43 | |UniProt=C9JCH2,Q9HD43 | ||
|association_with_transcript=24bp_to_ENST00000263434,ENST00000376350,NM_001161440,NM_002842,uc002qjq.2,uc002qjs.2,uc010esv.2_5end | |association_with_transcript=24bp_to_ENST00000263434,ENST00000376350,NM_001161440,NM_002842,uc002qjq.2,uc002qjs.2,uc010esv.2_5end | ||
|cluster_id=chr19:55720826..55720849,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_2_at_PTPRH_5end | |description=CAGE_peak_2_at_PTPRH_5end | ||
|id=chr19:55720826..55720849,- | |id=chr19:55720826..55720849,- | ||
|ontology_enrichment_celltype=CL:0000066!2.92e-09!254;CL:0000223!1.06e-07!59 | |ontology_enrichment_celltype=CL:0000066!2.92e-09!254;CL:0000223!1.06e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:1000415;2.73e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,2.73e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.13e-08;13!UBERON:0006595;1.25e-08;86!UBERON:0006242;1.31e-08;1!UBERON:0001045;3.70e-08;1 | |||
|ontology_enrichment_disease=DOID:305!7.21e-24!106;DOID:0050687!2.36e-18!143;DOID:162!5.86e-11!235;DOID:14566!1.71e-10!239;DOID:299!2.48e-10!25;DOID:170!3.57e-10!6;DOID:7!7.50e-08!39 | |ontology_enrichment_disease=DOID:305!7.21e-24!106;DOID:0050687!2.36e-18!143;DOID:162!5.86e-11!235;DOID:14566!1.71e-10!239;DOID:299!2.48e-10!25;DOID:170!3.57e-10!6;DOID:7!7.50e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:4929;8.12e-15;2!DOID:299;8.47e-13;25!DOID:3111;3.10e-08;1!DOID:3603;3.10e-08;1!DOID:6193;5.43e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,7.84e-15,2;DOID:299,8.24e-13,25;DOID:305,1.41e-11,106;DOID:0050687,4.29e-09,143;DOID:3111,2.89e-08,1;DOID:3603,2.89e-08,1;DOID:6193,4.41e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.84e-24!35;UBERON:0004921!2.16e-24!129;UBERON:0004185!2.16e-24!129;UBERON:0001007!2.20e-23!155;UBERON:0001555!2.20e-23!155;UBERON:0007026!2.20e-23!155;UBERON:0004119!2.05e-20!169;UBERON:0000925!2.05e-20!169;UBERON:0006595!2.05e-20!169;UBERON:0000160!5.94e-18!27;UBERON:0000077!1.88e-17!130;UBERON:0002294!1.05e-13!7;UBERON:0001173!1.05e-13!7;UBERON:0004912!1.05e-13!7;UBERON:0002075!2.58e-12!18;UBERON:0005177!1.12e-10!107;UBERON:0009497!2.15e-10!25;UBERON:0000015!2.15e-10!25;UBERON:0002423!2.15e-10!25;UBERON:0006235!2.15e-10!25;UBERON:0004161!2.15e-10!25;UBERON:0001041!2.26e-10!98;UBERON:0002108!3.33e-10!14;UBERON:0005911!7.25e-10!82;UBERON:0003929!4.45e-09!54;UBERON:0000481!4.88e-09!347;UBERON:0002110!6.79e-09!3;UBERON:0006242!6.79e-09!3;UBERON:0003104!9.85e-09!238;UBERON:0009142!9.85e-09!238;UBERON:0001046!1.52e-08!19;UBERON:0000059!1.72e-08!11;UBERON:0000945!4.56e-08!8;UBERON:0010039!4.56e-08!8;UBERON:0009856!4.98e-08!26;UBERON:0005172!8.66e-08!55;UBERON:0005173!8.66e-08!55;UBERON:0009854!1.56e-07!23;UBERON:0000466!1.63e-07!126;UBERON:0002394!9.01e-07!4;UBERON:0003928!9.01e-07!4;UBERON:0007499!9.38e-07!25 | |ontology_enrichment_uberon=UBERON:0005409!1.84e-24!35;UBERON:0004921!2.16e-24!129;UBERON:0004185!2.16e-24!129;UBERON:0001007!2.20e-23!155;UBERON:0001555!2.20e-23!155;UBERON:0007026!2.20e-23!155;UBERON:0004119!2.05e-20!169;UBERON:0000925!2.05e-20!169;UBERON:0006595!2.05e-20!169;UBERON:0000160!5.94e-18!27;UBERON:0000077!1.88e-17!130;UBERON:0002294!1.05e-13!7;UBERON:0001173!1.05e-13!7;UBERON:0004912!1.05e-13!7;UBERON:0002075!2.58e-12!18;UBERON:0005177!1.12e-10!107;UBERON:0009497!2.15e-10!25;UBERON:0000015!2.15e-10!25;UBERON:0002423!2.15e-10!25;UBERON:0006235!2.15e-10!25;UBERON:0004161!2.15e-10!25;UBERON:0001041!2.26e-10!98;UBERON:0002108!3.33e-10!14;UBERON:0005911!7.25e-10!82;UBERON:0003929!4.45e-09!54;UBERON:0000481!4.88e-09!347;UBERON:0002110!6.79e-09!3;UBERON:0006242!6.79e-09!3;UBERON:0003104!9.85e-09!238;UBERON:0009142!9.85e-09!238;UBERON:0001046!1.52e-08!19;UBERON:0000059!1.72e-08!11;UBERON:0000945!4.56e-08!8;UBERON:0010039!4.56e-08!8;UBERON:0009856!4.98e-08!26;UBERON:0005172!8.66e-08!55;UBERON:0005173!8.66e-08!55;UBERON:0009854!1.56e-07!23;UBERON:0000466!1.63e-07!126;UBERON:0002394!9.01e-07!4;UBERON:0003928!9.01e-07!4;UBERON:0007499!9.38e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.19e-35;22!UBERON:0002294;9.45e-35;7!UBERON:0001173;9.45e-35;7!UBERON:0000160;1.64e-30;17!UBERON:0002108;4.07e-23;4!UBERON:0004921;3.42e-21;33!UBERON:0002110;3.83e-21;3!UBERON:0002394;4.22e-16;4!UBERON:0003928;4.22e-16;4!UBERON:0000059;5.78e-16;11!UBERON:0001155;7.52e-13;9!UBERON:0002423;1.38e-12;25!UBERON:0000058;3.87e-11;10!UBERON:0002114;2.25e-10;2!UBERON:0002075;2.32e-09;18!UBERON:0001007;6.77e-09;81!UBERON:0004913;2.33e-08;1!UBERON:0003703;2.33e-08;1!UBERON:0001174;2.33e-08;1!UBERON:0004914;2.33e-08;1!UBERON:0001154;3.70e-08;1!UBERON:0001153;3.70e-08;1!UBERON:0009854;3.70e-08;1!UBERON:0001555;5.97e-08;54!UBERON:0009856;1.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.01e-36,25;UBERON:0000160,1.48e-30,17;UBERON:0002294,6.03e-27,9;UBERON:0001173,6.03e-27,9;UBERON:0004912,6.03e-27,9;UBERON:0002108,3.74e-23,4;UBERON:0002110,3.83e-21,3;UBERON:0006242,3.83e-21,3;UBERON:0001007,7.65e-17,145;UBERON:0001555,7.65e-17,145;UBERON:0007026,7.65e-17,145;UBERON:0000059,5.52e-16,11;UBERON:0004921,2.66e-15,118;UBERON:0004119,6.75e-15,160;UBERON:0000925,6.75e-15,160;UBERON:0006595,6.75e-15,160;UBERON:0001155,6.97e-13,9;UBERON:0009497,1.46e-12,25;UBERON:0000015,1.46e-12,25;UBERON:0002423,1.46e-12,25;UBERON:0006235,1.46e-12,25;UBERON:0004161,1.46e-12,25;UBERON:0002394,6.47e-11,6;UBERON:0003928,6.47e-11,6;UBERON:0002114,2.15e-10,2;UBERON:0002075,2.38e-09,18;UBERON:0009856,6.98e-09,26;UBERON:0004913,2.17e-08,1;UBERON:0003703,2.17e-08,1;UBERON:0001174,2.17e-08,1;UBERON:0004914,2.17e-08,1;UBERON:0000945,2.69e-08,8;UBERON:0010039,2.69e-08,8;UBERON:0001154,3.57e-08,1;UBERON:0001153,3.57e-08,1;UBERON:0001045,3.57e-08,1;UBERON:0011216,2.64e-07,223;UBERON:0009854,3.06e-07,23 | |||
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| ||
|short_description=p2@PTPRH | |short_description=p2@PTPRH | ||
}} | }} |
Latest revision as of 00:49, 20 September 2015
Short description: | p2@PTPRH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTPRH_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 24bp_to_ENST00000263434, ENST00000376350, NM_001161440, NM_002842, uc002qjq.2, uc002qjs.2, uc010esv.2_5end |
EntrezGene: | PTPRH |
HGNC: | 9672 |
UniProt: | C9JCH2Q9HD43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 2.73e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 7.84e-15 | 2 |
adenocarcinoma | 8.24e-13 | 25 |
carcinoma | 1.41e-11 | 106 |
cell type cancer | 4.29e-09 | 143 |
cystadenocarcinoma | 2.89e-08 | 1 |
mucinous cystadenocarcinoma | 2.89e-08 | 1 |
epithelioid sarcoma | 4.41e-08 | 1 |