FFCP PHASE1:Hg19::chr20:55839532..55839554,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:55839532..55839554,+ | |||
|description=CAGE_peak_at_chr20:55839532..55839554,+ | |description=CAGE_peak_at_chr20:55839532..55839554,+ | ||
|id=chr20:55839532..55839554,+ | |id=chr20:55839532..55839554,+ | ||
|ontology_enrichment_celltype=CL:0000080!3.53e-08!6 | |ontology_enrichment_celltype=CL:0000080!3.53e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002253;2.07e-12;2!CL:0002563;7.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.85e-12,2;CL:0002563,7.27e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;3.68e-23;4!DOID:1612;3.68e-23;4!DOID:299;1.17e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.68e-23,4;DOID:1612,3.68e-23,4;DOID:299,1.14e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0002110!2.89e-07!3;UBERON:0006242!2.89e-07!3 | |ontology_enrichment_uberon=UBERON:0002110!2.89e-07!3;UBERON:0006242!2.89e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.91e-20;10!UBERON:0000178;7.03e-14;15!UBERON:0000179;7.03e-14;15!UBERON:0000463;7.03e-14;15!UBERON:0000310;7.08e-10;10!UBERON:0001443;4.61e-09;11!UBERON:0000478;6.39e-09;24!UBERON:0000922;4.05e-07;49!UBERON:0002390;6.55e-07;32!UBERON:0001052;7.69e-07;4!UBERON:0001242;7.69e-07;4!UBERON:0001262;7.69e-07;4!UBERON:0004786;7.69e-07;4!UBERON:0004808;7.69e-07;4!UBERON:0001277;7.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.67e-20,10;UBERON:0000358,1.67e-20,10;UBERON:0000307,1.67e-20,10;UBERON:0000091,1.67e-20,10;UBERON:0000087,1.67e-20,10;UBERON:0007010,1.67e-20,10;UBERON:0007806,1.67e-20,10;UBERON:0008780,1.67e-20,10;UBERON:0005728,1.67e-20,10;UBERON:0000178,6.44e-14,15;UBERON:0000179,6.44e-14,15;UBERON:0000463,6.44e-14,15;UBERON:0000310,7.08e-10,10;UBERON:0001443,4.61e-09,11;UBERON:0000478,6.05e-09,24;UBERON:0001052,7.27e-07,4;UBERON:0001242,7.27e-07,4;UBERON:0001262,7.27e-07,4;UBERON:0004786,7.27e-07,4;UBERON:0004808,7.27e-07,4;UBERON:0001277,7.27e-07,4 | |||
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|short_description=p@chr20:55839532..55839554,+ | |short_description=p@chr20:55839532..55839554,+ | ||
}} | }} |
Latest revision as of 15:40, 28 July 2015
Short description: | p@chr20:55839532..55839554, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:55839532..55839554, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.85e-12 | 2 |
intestinal epithelial cell | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.67e-20 | 10 |
blastocyst | 1.67e-20 | 10 |
blastula | 1.67e-20 | 10 |
bilaminar disc | 1.67e-20 | 10 |
inner cell mass | 1.67e-20 | 10 |
cleaving embryo | 1.67e-20 | 10 |
connecting stalk | 1.67e-20 | 10 |
inner cell mass derived epiblast | 1.67e-20 | 10 |
extraembryonic mesoderm | 1.67e-20 | 10 |
blood | 6.44e-14 | 15 |
haemolymphatic fluid | 6.44e-14 | 15 |
organism substance | 6.44e-14 | 15 |
breast | 7.08e-10 | 10 |
chest | 4.61e-09 | 11 |
extraembryonic structure | 6.05e-09 | 24 |
rectum | 7.27e-07 | 4 |
intestinal mucosa | 7.27e-07 | 4 |
wall of intestine | 7.27e-07 | 4 |
gastrointestinal system mucosa | 7.27e-07 | 4 |
gastrointestinal system epithelium | 7.27e-07 | 4 |
intestinal epithelium | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.68e-23 | 4 |
breast cancer | 3.68e-23 | 4 |
adenocarcinoma | 1.14e-08 | 25 |