FFCP PHASE1:Hg19::chr11:2396596..2396607,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:2396596..2396607,- | |||
|coexpression_cluster_id=C56 | |coexpression_cluster_id=C56 | ||
|description=CAGE_peak_at_chr11:2396596..2396607,- | |description=CAGE_peak_at_chr11:2396596..2396607,- | ||
|id=chr11:2396596..2396607,- | |id=chr11:2396596..2396607,- | ||
|ontology_enrichment_celltype=CL:0000313!5.43e-08!1 | |ontology_enrichment_celltype=CL:0000313!5.43e-08!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;6.62e-41;1!UBERON:0010227;1.48e-40;1!UBERON:0010226;2.21e-40;1!UBERON:0005062;2.80e-11;4!UBERON:0007284;2.80e-11;4!UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease=DOID:178!1.75e-08!1;DOID:326!1.75e-08!1;DOID:3978!1.75e-08!1;DOID:3394!1.75e-08!1;DOID:5844!1.75e-08!1;DOID:2152!5.43e-08!1 | |ontology_enrichment_disease=DOID:178!1.75e-08!1;DOID:326!1.75e-08!1;DOID:3978!1.75e-08!1;DOID:3394!1.75e-08!1;DOID:5844!1.75e-08!1;DOID:2152!5.43e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.29e-12!115;UBERON:0007100!2.40e-12!27;UBERON:0004151!1.06e-10!3;UBERON:0003978!1.11e-10!3;UBERON:0009751!1.11e-10!3;UBERON:0000946!1.11e-10!3;UBERON:0002523!1.11e-10!3;UBERON:0005983!1.11e-10!3;UBERON:0002165!1.11e-10!3;UBERON:0002062!1.11e-10!3;UBERON:0007280!1.11e-10!3;UBERON:0006947!1.78e-10!3;UBERON:0004054!1.78e-10!3;UBERON:0002146!1.05e-08!1;UBERON:0005623!1.05e-08!1;UBERON:0002079!1.13e-08!1;UBERON:0002084!1.22e-08!1;UBERON:0002082!1.22e-08!1;UBERON:0004706!1.22e-08!1;UBERON:0002135!1.41e-08!1;UBERON:0003103!1.41e-08!69;UBERON:0000998!1.63e-08!1;UBERON:0006868!1.63e-08!1;UBERON:0001000!1.88e-08!1;UBERON:0005352!1.88e-08!1;UBERON:0003112!3.57e-08!1;UBERON:0000032!3.57e-08!1;UBERON:0005253!3.57e-08!1;UBERON:0003128!3.57e-08!1;UBERON:0002241!3.57e-08!1;UBERON:0001703!3.57e-08!1;UBERON:0004761!3.57e-08!1;UBERON:0009617!3.57e-08!1;UBERON:0005904!4.57e-08!4;UBERON:0004911!5.43e-08!1;UBERON:0000997!5.82e-08!1;UBERON:0005056!5.82e-08!1;UBERON:0000948!2.07e-07!24;UBERON:0005498!2.07e-07!24;UBERON:0004140!2.07e-07!24;UBERON:0009881!2.07e-07!24;UBERON:0004141!2.07e-07!24;UBERON:0003084!2.07e-07!24;UBERON:0007005!2.07e-07!24;UBERON:0004139!2.07e-07!24;UBERON:0004291!2.07e-07!24 | |ontology_enrichment_uberon=UBERON:0007023!2.29e-12!115;UBERON:0007100!2.40e-12!27;UBERON:0004151!1.06e-10!3;UBERON:0003978!1.11e-10!3;UBERON:0009751!1.11e-10!3;UBERON:0000946!1.11e-10!3;UBERON:0002523!1.11e-10!3;UBERON:0005983!1.11e-10!3;UBERON:0002165!1.11e-10!3;UBERON:0002062!1.11e-10!3;UBERON:0007280!1.11e-10!3;UBERON:0006947!1.78e-10!3;UBERON:0004054!1.78e-10!3;UBERON:0002146!1.05e-08!1;UBERON:0005623!1.05e-08!1;UBERON:0002079!1.13e-08!1;UBERON:0002084!1.22e-08!1;UBERON:0002082!1.22e-08!1;UBERON:0004706!1.22e-08!1;UBERON:0002135!1.41e-08!1;UBERON:0003103!1.41e-08!69;UBERON:0000998!1.63e-08!1;UBERON:0006868!1.63e-08!1;UBERON:0001000!1.88e-08!1;UBERON:0005352!1.88e-08!1;UBERON:0003112!3.57e-08!1;UBERON:0000032!3.57e-08!1;UBERON:0005253!3.57e-08!1;UBERON:0003128!3.57e-08!1;UBERON:0002241!3.57e-08!1;UBERON:0001703!3.57e-08!1;UBERON:0004761!3.57e-08!1;UBERON:0009617!3.57e-08!1;UBERON:0005904!4.57e-08!4;UBERON:0004911!5.43e-08!1;UBERON:0000997!5.82e-08!1;UBERON:0005056!5.82e-08!1;UBERON:0000948!2.07e-07!24;UBERON:0005498!2.07e-07!24;UBERON:0004140!2.07e-07!24;UBERON:0009881!2.07e-07!24;UBERON:0004141!2.07e-07!24;UBERON:0003084!2.07e-07!24;UBERON:0007005!2.07e-07!24;UBERON:0004139!2.07e-07!24;UBERON:0004291!2.07e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;3.75e-53;3!UBERON:0002146;9.91e-41;1!UBERON:0005623;9.91e-41;1!UBERON:0002079;1.48e-40;1!UBERON:0002084;2.21e-40;1!UBERON:0002082;2.21e-40;1!UBERON:0007100;6.36e-40;25!UBERON:0000948;2.19e-29;22!UBERON:0002081;4.66e-21;2!UBERON:0003978;1.40e-14;3!UBERON:0000946;1.40e-14;3!UBERON:0003103;5.01e-10;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.75e-53,3;UBERON:0002146,9.91e-41,1;UBERON:0005623,9.91e-41,1;UBERON:0002079,1.48e-40,1;UBERON:0002084,2.21e-40,1;UBERON:0002082,2.21e-40,1;UBERON:0010226,2.21e-40,1;UBERON:0007100,4.92e-37,27;UBERON:0000948,5.19e-27,24;UBERON:0005498,5.19e-27,24;UBERON:0004140,5.19e-27,24;UBERON:0009881,5.19e-27,24;UBERON:0004141,5.19e-27,24;UBERON:0003084,5.19e-27,24;UBERON:0007005,5.19e-27,24;UBERON:0004139,5.19e-27,24;UBERON:0004291,5.19e-27,24;UBERON:0002081,4.66e-21,2;UBERON:0010227,4.66e-21,2;UBERON:0003103,3.48e-15,68;UBERON:0003978,1.40e-14,3;UBERON:0009751,1.40e-14,3;UBERON:0000946,1.40e-14,3;UBERON:0002523,1.40e-14,3;UBERON:0005983,1.40e-14,3;UBERON:0002165,1.40e-14,3;UBERON:0002062,1.40e-14,3;UBERON:0007280,1.40e-14,3;UBERON:0001009,1.80e-09,112;UBERON:0004872,2.54e-08,83;UBERON:0004797,5.38e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,7.79145441639724,0,0.399358000997982,0,1.11585728720936,8.06201669840715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,5.00286728461357,3.31045985182716,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.25458863311266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,7.79145441639724,0,0.399358000997982,0,1.11585728720936,8.06201669840715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,5.00286728461357,3.31045985182716,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.25458863311266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:2396596..2396607,- | |short_description=p@chr11:2396596..2396607,- | ||
}} | }} |
Latest revision as of 21:10, 23 July 2015
Short description: | p@chr11:2396596..2396607, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2396596..2396607, - |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 3.75e-53 | 3 |
pulmonary valve | 9.91e-41 | 1 |
semi-lunar valve | 9.91e-41 | 1 |
left cardiac atrium | 1.48e-40 | 1 |
heart left ventricle | 2.21e-40 | 1 |
cardiac ventricle | 2.21e-40 | 1 |
future cardiac ventricle | 2.21e-40 | 1 |
primary circulatory organ | 4.92e-37 | 27 |
heart | 5.19e-27 | 24 |
primitive heart tube | 5.19e-27 | 24 |
primary heart field | 5.19e-27 | 24 |
anterior lateral plate mesoderm | 5.19e-27 | 24 |
heart tube | 5.19e-27 | 24 |
heart primordium | 5.19e-27 | 24 |
cardiac mesoderm | 5.19e-27 | 24 |
cardiogenic plate | 5.19e-27 | 24 |
heart rudiment | 5.19e-27 | 24 |
cardiac atrium | 4.66e-21 | 2 |
future cardiac atrium | 4.66e-21 | 2 |
compound organ | 3.48e-15 | 68 |
valve | 1.40e-14 | 3 |
cardiac mesenchyme | 1.40e-14 | 3 |
cardial valve | 1.40e-14 | 3 |
tunica intima | 1.40e-14 | 3 |
heart layer | 1.40e-14 | 3 |
endocardium | 1.40e-14 | 3 |
endocardial cushion | 1.40e-14 | 3 |
presumptive endocardium | 1.40e-14 | 3 |
circulatory system | 1.80e-09 | 112 |
splanchnic layer of lateral plate mesoderm | 2.54e-08 | 83 |
blood vessel layer | 5.38e-07 | 7 |