FFCP PHASE1:Hg19::chr5:58571724..58571727,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-68bp_to_uc003jsd.1_5end | |association_with_transcript=-68bp_to_uc003jsd.1_5end | ||
|cluster_id=chr5:58571724..58571727,- | |||
|coexpression_cluster_id=C2825 | |coexpression_cluster_id=C2825 | ||
|description=CAGE_peak_8_at_uc003jsd.1_5end | |description=CAGE_peak_8_at_uc003jsd.1_5end | ||
|id=chr5:58571724..58571727,- | |id=chr5:58571724..58571727,- | ||
|ontology_enrichment_celltype=CL:0002150!6.25e-12!3;CL:0000861!6.25e-12!3 | |ontology_enrichment_celltype=CL:0002150!6.25e-12!3;CL:0000861!6.25e-12!3 | ||
|ontology_enrichment_celltype_v019=CL:1000415;6.48e-18;2!CL:0000082;6.36e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,6.48e-18,2;CL:0000082,6.15e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.79e-11;29!UBERON:0001041;1.27e-10;30!UBERON:0007123;6.78e-08;5 | |||
|ontology_enrichment_disease=DOID:305!7.37e-07!106 | |ontology_enrichment_disease=DOID:305!7.37e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:4556;2.74e-12;3!DOID:1324;8.85e-10;15!DOID:0050615;3.14e-09;16!DOID:4362;5.35e-08;5!DOID:3908;6.78e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,2.31e-12,3;DOID:1324,8.46e-10,15;DOID:0050615,3.01e-09,16;DOID:4362,5.35e-08,5;DOID:3908,6.13e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.73e-24!9;UBERON:0007023!1.13e-17!115;UBERON:0001557!1.01e-16!19;UBERON:0008947!1.05e-15!38;UBERON:0003258!1.05e-15!38;UBERON:0000065!1.20e-13!53;UBERON:0000072!4.40e-12!46;UBERON:0000077!6.31e-10!130;UBERON:0004921!7.21e-10!129;UBERON:0004185!7.21e-10!129;UBERON:0001007!3.97e-09!155;UBERON:0001555!3.97e-09!155;UBERON:0007026!3.97e-09!155;UBERON:0001004!4.72e-09!72;UBERON:0001950!5.23e-09!20;UBERON:0000062!9.48e-09!511;UBERON:0001041!1.24e-08!98;UBERON:0001869!3.56e-08!32;UBERON:0002619!4.08e-08!22;UBERON:0000481!4.85e-08!347;UBERON:0004119!6.99e-08!169;UBERON:0000925!6.99e-08!169;UBERON:0006595!6.99e-08!169;UBERON:0001893!1.32e-07!34;UBERON:0000477!3.12e-07!286;UBERON:0000064!4.89e-07!219;UBERON:0000956!4.89e-07!25;UBERON:0000203!4.89e-07!25 | |ontology_enrichment_uberon=UBERON:0001737!1.73e-24!9;UBERON:0007023!1.13e-17!115;UBERON:0001557!1.01e-16!19;UBERON:0008947!1.05e-15!38;UBERON:0003258!1.05e-15!38;UBERON:0000065!1.20e-13!53;UBERON:0000072!4.40e-12!46;UBERON:0000077!6.31e-10!130;UBERON:0004921!7.21e-10!129;UBERON:0004185!7.21e-10!129;UBERON:0001007!3.97e-09!155;UBERON:0001555!3.97e-09!155;UBERON:0007026!3.97e-09!155;UBERON:0001004!4.72e-09!72;UBERON:0001950!5.23e-09!20;UBERON:0000062!9.48e-09!511;UBERON:0001041!1.24e-08!98;UBERON:0001869!3.56e-08!32;UBERON:0002619!4.08e-08!22;UBERON:0000481!4.85e-08!347;UBERON:0004119!6.99e-08!169;UBERON:0000925!6.99e-08!169;UBERON:0006595!6.99e-08!169;UBERON:0001893!1.32e-07!34;UBERON:0000477!3.12e-07!286;UBERON:0000064!4.89e-07!219;UBERON:0000956!4.89e-07!25;UBERON:0000203!4.89e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.97e-34;1!UBERON:0006518;5.97e-34;1!UBERON:0008949;5.97e-34;1!UBERON:0000101;5.97e-34;1!UBERON:0002167;5.97e-34;1!UBERON:0002048;3.34e-14;22!UBERON:0000117;3.34e-14;22!UBERON:0000171;3.34e-14;22!UBERON:0000170;3.34e-14;22!UBERON:0002110;2.07e-12;3!UBERON:0005178;4.87e-09;34!UBERON:0002224;4.87e-09;34!UBERON:0000065;4.58e-08;44!UBERON:0004802;6.36e-08;19!UBERON:0000115;6.36e-08;19!UBERON:0002046;6.78e-08;5!UBERON:0004807;5.74e-07;22!UBERON:0005181;6.32e-07;35!UBERON:0000002;7.17e-07;6!UBERON:0001560;7.17e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,5.05e-34,1;UBERON:0006518,5.05e-34,1;UBERON:0008949,5.05e-34,1;UBERON:0000101,5.05e-34,1;UBERON:0002167,5.05e-34,1;UBERON:0002048,3.13e-14,22;UBERON:0000117,3.13e-14,22;UBERON:0000171,3.13e-14,22;UBERON:0000170,3.13e-14,22;UBERON:0005597,3.13e-14,22;UBERON:0000118,3.13e-14,22;UBERON:0002110,2.07e-12,3;UBERON:0006242,2.07e-12,3;UBERON:0005911,1.68e-10,82;UBERON:0005178,1.77e-09,34;UBERON:0002224,1.77e-09,34;UBERON:0005181,3.15e-09,35;UBERON:0005153,9.09e-09,37;UBERON:0008947,1.48e-08,38;UBERON:0003258,1.48e-08,38;UBERON:0004802,6.15e-08,19;UBERON:0000115,6.15e-08,19;UBERON:0002046,7.49e-08,5;UBERON:0004117,7.49e-08,5;UBERON:0007689,7.49e-08,5;UBERON:0007123,7.49e-08,5;UBERON:0003091,7.49e-08,5;UBERON:0005157,4.79e-07,47;UBERON:0000002,7.17e-07,6;UBERON:0001560,7.17e-07,6 | |||
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| ||
|short_description=p8@uc003jsd.1 | |short_description=p8@uc003jsd.1 | ||
}} | }} |
Latest revision as of 15:31, 30 July 2015
Short description: | p8@uc003jsd.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_uc003jsd.1_5end |
Coexpression cluster: | C2825_cervical_gall_bile_rectal_epitheloid_large_umbilical |
Association with transcript: | -68bp_to_uc003jsd.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 6.48e-18 | 2 |
epithelial cell of lung | 6.15e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 5.05e-34 | 1 |
right lung lobe | 5.05e-34 | 1 |
lower lobe of lung | 5.05e-34 | 1 |
lobe of lung | 5.05e-34 | 1 |
right lung | 5.05e-34 | 1 |
lung | 3.13e-14 | 22 |
respiratory tube | 3.13e-14 | 22 |
respiration organ | 3.13e-14 | 22 |
pair of lungs | 3.13e-14 | 22 |
lung primordium | 3.13e-14 | 22 |
lung bud | 3.13e-14 | 22 |
gallbladder | 2.07e-12 | 3 |
gall bladder primordium | 2.07e-12 | 3 |
endo-epithelium | 1.68e-10 | 82 |
thoracic cavity element | 1.77e-09 | 34 |
thoracic cavity | 1.77e-09 | 34 |
thoracic segment organ | 3.15e-09 | 35 |
epithelial bud | 9.09e-09 | 37 |
respiratory primordium | 1.48e-08 | 38 |
endoderm of foregut | 1.48e-08 | 38 |
respiratory tract epithelium | 6.15e-08 | 19 |
lung epithelium | 6.15e-08 | 19 |
thyroid gland | 7.49e-08 | 5 |
pharyngeal pouch | 7.49e-08 | 5 |
thyroid diverticulum | 7.49e-08 | 5 |
pharyngeal pouch 2 | 7.49e-08 | 5 |
thyroid primordium | 7.49e-08 | 5 |
epithelial fold | 4.79e-07 | 47 |
uterine cervix | 7.17e-07 | 6 |
neck of organ | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 2.31e-12 | 3 |
lung cancer | 8.46e-10 | 15 |
respiratory system cancer | 3.01e-09 | 16 |
cervical cancer | 5.35e-08 | 5 |
non-small cell lung carcinoma | 6.13e-08 | 5 |