FFCP PHASE1:Hg19::chr12:117348742..117348822,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26259 | |EntrezGene=26259 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13597 | |HGNC=13597 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N3Y1 | |UniProt=Q8N3Y1 | ||
|association_with_transcript=0bp_to_ENST00000309909,ENST00000455858,ENST00000505227,NM_012174,NM_153348,uc001twf.1,uc001twg.1,uc009zwp.1_5end | |association_with_transcript=0bp_to_ENST00000309909,ENST00000455858,ENST00000505227,NM_012174,NM_153348,uc001twf.1,uc001twg.1,uc009zwp.1_5end | ||
|cluster_id=chr12:117348742..117348822,+ | |||
|description=CAGE_peak_1_at_FBXW8_5end | |description=CAGE_peak_1_at_FBXW8_5end | ||
|id=chr12:117348742..117348822,+ | |id=chr12:117348742..117348822,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.22e-17!180;CL:0000057!1.10e-10!75;CL:0000183!1.17e-09!59;CL:0000680!2.54e-09!57;CL:0000056!2.54e-09!57;CL:0000355!2.54e-09!57;CL:0000187!4.43e-09!54;CL:0000192!6.85e-09!42;CL:0000514!6.85e-09!42;CL:0002620!1.99e-07!23;CL:0000222!3.53e-07!119;CL:0000359!5.38e-07!32;CL:0000393!5.85e-07!60;CL:0000211!5.85e-07!60 | |ontology_enrichment_celltype=CL:0000055!7.22e-17!180;CL:0000057!1.10e-10!75;CL:0000183!1.17e-09!59;CL:0000680!2.54e-09!57;CL:0000056!2.54e-09!57;CL:0000355!2.54e-09!57;CL:0000187!4.43e-09!54;CL:0000192!6.85e-09!42;CL:0000514!6.85e-09!42;CL:0002620!1.99e-07!23;CL:0000222!3.53e-07!119;CL:0000359!5.38e-07!32;CL:0000393!5.85e-07!60;CL:0000211!5.85e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.00e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.28e-11,76;CL:0000680,3.11e-09,58;CL:0000056,3.11e-09,58;CL:0000355,3.11e-09,58;CL:0000187,5.46e-09,55;CL:0000192,9.05e-09,43;CL:0000514,9.05e-09,43;CL:0002620,1.99e-07,23;CL:0000222,2.87e-07,121;CL:0000359,5.38e-07,32;CL:0000393,6.61e-07,61;CL:0000211,6.61e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.23e-11!365;UBERON:0002100!1.04e-10!216;UBERON:0004290!2.96e-10!70;UBERON:0000914!2.75e-09!83;UBERON:0002329!2.75e-09!83;UBERON:0003077!2.75e-09!83;UBERON:0003059!2.75e-09!83;UBERON:0007282!2.75e-09!83;UBERON:0009618!2.75e-09!83;UBERON:0007285!2.75e-09!83;UBERON:0001134!8.83e-09!61;UBERON:0002036!8.83e-09!61;UBERON:0003082!8.83e-09!61;UBERON:0002385!2.46e-08!63;UBERON:0001015!2.46e-08!63;UBERON:0000383!2.46e-08!63;UBERON:0003104!3.40e-08!238;UBERON:0009142!3.40e-08!238;UBERON:0005256!3.87e-08!143;UBERON:0002049!1.30e-07!79;UBERON:0007798!1.30e-07!79;UBERON:0004872!2.95e-07!84;UBERON:0000481!8.24e-07!347 | |ontology_enrichment_uberon=UBERON:0000475!4.23e-11!365;UBERON:0002100!1.04e-10!216;UBERON:0004290!2.96e-10!70;UBERON:0000914!2.75e-09!83;UBERON:0002329!2.75e-09!83;UBERON:0003077!2.75e-09!83;UBERON:0003059!2.75e-09!83;UBERON:0007282!2.75e-09!83;UBERON:0009618!2.75e-09!83;UBERON:0007285!2.75e-09!83;UBERON:0001134!8.83e-09!61;UBERON:0002036!8.83e-09!61;UBERON:0003082!8.83e-09!61;UBERON:0002385!2.46e-08!63;UBERON:0001015!2.46e-08!63;UBERON:0000383!2.46e-08!63;UBERON:0003104!3.40e-08!238;UBERON:0009142!3.40e-08!238;UBERON:0005256!3.87e-08!143;UBERON:0002049!1.30e-07!79;UBERON:0007798!1.30e-07!79;UBERON:0004872!2.95e-07!84;UBERON:0000481!8.24e-07!347 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.15e-11,199;UBERON:0003104,1.35e-10,160;UBERON:0009142,1.35e-10,160;UBERON:0002329,3.53e-10,71;UBERON:0003059,3.53e-10,71;UBERON:0007282,3.53e-10,71;UBERON:0004290,3.53e-10,71;UBERON:0009618,3.53e-10,71;UBERON:0003077,9.32e-10,72;UBERON:0007285,9.32e-10,72;UBERON:0007524,9.92e-10,73;UBERON:0007503,1.10e-09,78;UBERON:0005256,4.97e-09,122;UBERON:0001134,1.05e-08,62;UBERON:0002036,1.05e-08,62;UBERON:0003082,1.05e-08,62;UBERON:0002385,2.86e-08,64;UBERON:0001015,2.86e-08,64;UBERON:0000383,2.86e-08,64;UBERON:0002049,1.70e-07,78;UBERON:0007798,1.70e-07,78;UBERON:0000490,2.60e-07,148;UBERON:0004872,3.84e-07,83 | |||
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41136984606466 | ||
|short_description=p1@FBXW8 | |short_description=p1@FBXW8 | ||
}} | }} |
Latest revision as of 16:14, 16 September 2015
Short description: | p1@FBXW8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FBXW8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000309909, ENST00000455858, ENST00000505227, NM_012174, NM_153348, uc001twf.1, uc001twg.1, uc009zwp.1_5end |
EntrezGene: | FBXW8 |
HGNC: | 13597 |
UniProt: | Q8N3Y1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.28e-11 | 76 |
muscle precursor cell | 3.11e-09 | 58 |
myoblast | 3.11e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.11e-09 | 58 |
muscle cell | 5.46e-09 | 55 |
smooth muscle cell | 9.05e-09 | 43 |
smooth muscle myoblast | 9.05e-09 | 43 |
skin fibroblast | 1.99e-07 | 23 |
mesodermal cell | 2.87e-07 | 121 |
vascular associated smooth muscle cell | 5.38e-07 | 32 |
electrically responsive cell | 6.61e-07 | 61 |
electrically active cell | 6.61e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
trunk | 3.15e-11 | 199 |
mesenchyme | 1.35e-10 | 160 |
entire embryonic mesenchyme | 1.35e-10 | 160 |
somite | 3.53e-10 | 71 |
presomitic mesoderm | 3.53e-10 | 71 |
presumptive segmental plate | 3.53e-10 | 71 |
dermomyotome | 3.53e-10 | 71 |
trunk paraxial mesoderm | 3.53e-10 | 71 |
paraxial mesoderm | 9.32e-10 | 72 |
presumptive paraxial mesoderm | 9.32e-10 | 72 |
dense mesenchyme tissue | 9.92e-10 | 73 |
epithelial vesicle | 1.10e-09 | 78 |
trunk mesenchyme | 4.97e-09 | 122 |
skeletal muscle tissue | 1.05e-08 | 62 |
striated muscle tissue | 1.05e-08 | 62 |
myotome | 1.05e-08 | 62 |
muscle tissue | 2.86e-08 | 64 |
musculature | 2.86e-08 | 64 |
musculature of body | 2.86e-08 | 64 |
vasculature | 1.70e-07 | 78 |
vascular system | 1.70e-07 | 78 |
unilaminar epithelium | 2.60e-07 | 148 |
splanchnic layer of lateral plate mesoderm | 3.84e-07 | 83 |