FFCP PHASE1:Hg19::chr2:74741642..74741658,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3196 | |EntrezGene=3196 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5057 | |HGNC=5057 | ||
|TSSclassifier=strong | |||
|UniProt=O43763 | |UniProt=O43763 | ||
|association_with_transcript=31bp_to_ENST00000233638,uc002smb.1_5end | |association_with_transcript=31bp_to_ENST00000233638,uc002smb.1_5end | ||
|cluster_id=chr2:74741642..74741658,+ | |||
|coexpression_cluster_id=C85 | |coexpression_cluster_id=C85 | ||
|description=CAGE_peak_2_at_TLX2_5end | |description=CAGE_peak_2_at_TLX2_5end | ||
|id=chr2:74741642..74741658,+ | |id=chr2:74741642..74741658,+ | ||
|ontology_enrichment_celltype=CL:0000333!1.48e-07!41;CL:0000095!6.99e-07!17;CL:0000123!6.99e-07!17;CL:0002583!8.40e-07!2 | |ontology_enrichment_celltype=CL:0000333!1.48e-07!41;CL:0000095!6.99e-07!17;CL:0000123!6.99e-07!17;CL:0002583!8.40e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.14e-28;5!CL:0002321;5.41e-10;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.78e-16;1 | |||
|ontology_enrichment_disease=DOID:5409!2.89e-07!4 | |ontology_enrichment_disease=DOID:5409!2.89e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:169;5.10e-24;6!DOID:171;1.09e-14;10!DOID:4231;6.67e-09;2!DOID:1907;6.67e-09;2!DOID:3095;5.56e-07;22!DOID:2994;5.56e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.31e-24,6;DOID:171,1.12e-14,10;DOID:4231,5.94e-09,2;DOID:1907,5.94e-09,2;DOID:3095,5.62e-07,22;DOID:2994,5.62e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000010!2.18e-12!8;UBERON:0000073!5.98e-11!94;UBERON:0001016!5.98e-11!94;UBERON:0000955!2.49e-07!69;UBERON:0006238!2.49e-07!69 | |ontology_enrichment_uberon=UBERON:0000010!2.18e-12!8;UBERON:0000073!5.98e-11!94;UBERON:0001016!5.98e-11!94;UBERON:0000955!2.49e-07!69;UBERON:0006238!2.49e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.14e-28;5!UBERON:0002410;1.14e-28;5!UBERON:0000010;8.68e-28;8!UBERON:0000941;1.78e-16;1!UBERON:0001785;1.78e-16;1!UBERON:0002464;1.78e-16;1!UBERON:0004904;1.78e-16;1!UBERON:0001021;1.78e-16;1!UBERON:0003714;6.67e-09;2!UBERON:0001875;6.67e-09;2!UBERON:0005162;6.67e-09;2!UBERON:0000122;6.67e-09;2!UBERON:0006514;6.67e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.20e-28,5;UBERON:0002410,1.20e-28,5;UBERON:0000010,8.69e-28,8;UBERON:0000941,1.65e-16,1;UBERON:0001785,1.65e-16,1;UBERON:0002464,1.65e-16,1;UBERON:0004904,1.65e-16,1;UBERON:0001021,1.65e-16,1;UBERON:0003902,1.65e-16,1;UBERON:0005425,1.65e-16,1;UBERON:0003714,6.42e-09,2;UBERON:0005162,6.42e-09,2;UBERON:0000122,6.42e-09,2;UBERON:0001875,7.49e-09,2;UBERON:0006514,7.49e-09,2 | |||
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| ||
|short_description=p2@TLX2 | |short_description=p2@TLX2 | ||
}} | }} |
Latest revision as of 11:39, 18 September 2015
Short description: | p2@TLX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TLX2_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | 31bp_to_ENST00000233638, uc002smb.1_5end |
EntrezGene: | TLX2 |
HGNC: | 5057 |
UniProt: | O43763 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.20e-28 | 5 |
autonomic nervous system | 1.20e-28 | 5 |
peripheral nervous system | 8.69e-28 | 8 |
cranial nerve II | 1.65e-16 | 1 |
cranial nerve | 1.65e-16 | 1 |
nerve trunk | 1.65e-16 | 1 |
nerve connecting eye with brain | 1.65e-16 | 1 |
nerve | 1.65e-16 | 1 |
retinal neural layer | 1.65e-16 | 1 |
presumptive neural retina | 1.65e-16 | 1 |
neural tissue | 6.42e-09 | 2 |
multi cell component structure | 6.42e-09 | 2 |
neuron projection bundle | 6.42e-09 | 2 |
globus pallidus | 7.49e-09 | 2 |
pallidum | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.31e-24 | 6 |
neuroectodermal tumor | 1.12e-14 | 10 |
histiocytoma | 5.94e-09 | 2 |
malignant fibroxanthoma | 5.94e-09 | 2 |
germ cell and embryonal cancer | 5.62e-07 | 22 |
germ cell cancer | 5.62e-07 | 22 |