FFCP PHASE1:Hg19::chr1:186646768..186646785,-: Difference between revisions
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|id=chr1:186646768..186646785,-
|short_description=p@chr1:186646768..186646785,-
|description=CAGE_peak_at_chr1:186646768..186646785,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:186646768..186646785,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr1:186646768..186646785,- | |||
|id=chr1:186646768..186646785,- | |||
|ontology_enrichment_celltype=CL:0000860!1.20e-34!45;CL:0002057!1.19e-33!42;CL:0000766!2.85e-26!76;CL:0000557!1.80e-23!71;CL:0000839!2.40e-22!70;CL:0002009!8.27e-22!65;CL:0002194!3.56e-21!63;CL:0000576!3.56e-21!63;CL:0000040!3.56e-21!63;CL:0000559!3.56e-21!63;CL:0000763!4.56e-19!112;CL:0000049!4.56e-19!112;CL:0000738!1.39e-14!140;CL:0000134!1.57e-12!358;CL:0002320!2.08e-12!365;CL:0000037!1.65e-11!172;CL:0000566!1.65e-11!172;CL:0002031!2.49e-11!124;CL:0002032!4.54e-11!165;CL:0000837!4.54e-11!165;CL:0000723!4.86e-11!436;CL:0000048!5.67e-11!430;CL:0002087!1.40e-10!119;CL:0000034!2.00e-10!444;CL:0000988!3.63e-10!182;CL:0000219!4.12e-10!390;CL:0000569!2.55e-07!4;CL:0000011!2.55e-07!4;CL:0000775!4.92e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.09e-29;33!CL:0002057;5.09e-29;33!CL:0000473;8.70e-22;39!CL:0000234;8.70e-22;39!CL:0000775;1.76e-21;3!CL:0000766;1.46e-14;69!CL:0000094;6.96e-14;8!CL:0000576;4.55e-13;48!CL:0000081;3.90e-10;11!CL:0000763;9.42e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.01e-30,72;CL:0000860,5.96e-29,42;CL:0002057,5.96e-29,42;CL:0000473,5.45e-25,48;CL:0000234,5.45e-25,48;CL:0000775,1.59e-21,3;CL:0000839,7.94e-20,66;CL:0000557,1.72e-19,67;CL:0002194,1.92e-19,59;CL:0000576,1.92e-19,59;CL:0000040,1.92e-19,59;CL:0000559,1.92e-19,59;CL:0002009,9.96e-19,61;CL:0000763,1.01e-18,108;CL:0000049,1.01e-18,108;CL:0000738,7.96e-16,136;CL:0000094,6.85e-14,8;CL:0002032,9.06e-13,161;CL:0000837,9.06e-13,161;CL:0000037,4.47e-12,168;CL:0000988,2.90e-11,177;CL:0002031,4.04e-11,120;CL:0002087,3.75e-10,115;CL:0000081,3.85e-10,11;CL:0000134,3.77e-07,354;CL:0002320,6.43e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.67e-20;42!UBERON:0005754;2.12e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.05e-22!80;UBERON:0002390!6.00e-22!102;UBERON:0003061!6.00e-22!102;UBERON:0001474!2.96e-21!86;UBERON:0002193!7.36e-20!112;UBERON:0004765!2.14e-18!101;UBERON:0001434!2.14e-18!101;UBERON:0003081!2.99e-16!216;UBERON:0002405!8.91e-14!115;UBERON:0002204!6.05e-12!167;UBERON:0002384!1.66e-11!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;2.12e-08;1!UBERON:0006868;2.12e-08;1!UBERON:0002135;8.12e-08;1!UBERON:0002119;2.07e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.26e-17,76;UBERON:0001474,1.97e-15,82;UBERON:0004765,8.19e-14,90;UBERON:0002405,2.81e-13,93;UBERON:0002390,1.86e-12,98;UBERON:0003061,1.86e-12,98;UBERON:0001434,3.75e-12,100;UBERON:0002193,4.82e-11,108;UBERON:0003081,3.04e-09,203;UBERON:0000998,2.04e-08,1;UBERON:0006868,2.04e-08,1;UBERON:0002204,3.04e-08,167;UBERON:0002135,1.21e-07,1;UBERON:0002119,1.87e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20871115952227,0.651032612147555,0,0,0,0.145398238779565,0,0,1.16214518452842,0.411167888021826,0.309706370895104,0.863077176966451,0.512321413058201,0.47296445977717,5.5159308917859,7.10033151942209,4.06279459783025,0.564727018627814,0.272906150057846,0,5.81559395504715,1.60464513538047,6.39337125799041,0.659702600373432,0.598390972864896,0,12.7692064996577,4.53908179752912,8.09668923694247,0,1.5644487552606,0.434377689410233,2.42159801053347,0.736555271975129,2.53169909952708,0,0,0.209658645508376,0.336985893439485,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,1.17447437874188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0,0.397227542439656,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0,1.51460264546469,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,2.95597942737566,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74106321552464,17.9496875522415,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0.431428401637234,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,1.91419068741876,0,0,0.94443704049192,1.3940745403212,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11300293513511,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.822724546172388,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.664846727600626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0.251567901752575,0,1.14420034198462,0.151230923763239,0.466311601748341,0.887130899937803,1.91156120596443,0,0.155262956876259,1.24411862352257,0.265841714557995,0,0.751288044986092,0,0,0.181848659202559,0.322231671127465,0.464033759878494,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.39997479170986,0.106691729694141,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.170426809518315,7.19757985324579,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20871115952227,0.651032612147555,0,0,0,0.145398238779565,0,0,1.16214518452842,0.411167888021826,0.309706370895104,0.863077176966451,0.512321413058201,0.47296445977717,5.5159308917859,7.10033151942209,4.06279459783025,0.564727018627814,0.272906150057846,0,5.81559395504715,1.60464513538047,6.39337125799041,0.659702600373432,0.598390972864896,0,12.7692064996577,4.53908179752912,8.09668923694247,0,1.5644487552606,0.434377689410233,2.42159801053347,0.736555271975129,2.53169909952708,0,0,0.209658645508376,0.336985893439485,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,1.17447437874188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0,0.397227542439656,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0,1.51460264546469,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,2.95597942737566,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74106321552464,17.9496875522415,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0.431428401637234,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,1.91419068741876,0,0,0.94443704049192,1.3940745403212,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11300293513511,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.822724546172388,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.664846727600626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0.251567901752575,0,1.14420034198462,0.151230923763239,0.466311601748341,0.887130899937803,1.91156120596443,0,0.155262956876259,1.24411862352257,0.265841714557995,0,0.751288044986092,0,0,0.181848659202559,0.322231671127465,0.464033759878494,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.39997479170986,0.106691729694141,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.170426809518315,7.19757985324579,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:186646768..186646785,- | |||
}} | }} |
Latest revision as of 01:33, 28 July 2015
Short description: | p@chr1:186646768..186646785, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186646768..186646785, - |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.01e-30 | 72 |
classical monocyte | 5.96e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.96e-29 | 42 |
defensive cell | 5.45e-25 | 48 |
phagocyte | 5.45e-25 | 48 |
neutrophil | 1.59e-21 | 3 |
myeloid lineage restricted progenitor cell | 7.94e-20 | 66 |
granulocyte monocyte progenitor cell | 1.72e-19 | 67 |
monopoietic cell | 1.92e-19 | 59 |
monocyte | 1.92e-19 | 59 |
monoblast | 1.92e-19 | 59 |
promonocyte | 1.92e-19 | 59 |
macrophage dendritic cell progenitor | 9.96e-19 | 61 |
myeloid cell | 1.01e-18 | 108 |
common myeloid progenitor | 1.01e-18 | 108 |
leukocyte | 7.96e-16 | 136 |
granulocyte | 6.85e-14 | 8 |
hematopoietic oligopotent progenitor cell | 9.06e-13 | 161 |
hematopoietic multipotent progenitor cell | 9.06e-13 | 161 |
hematopoietic stem cell | 4.47e-12 | 168 |
hematopoietic cell | 2.90e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 4.04e-11 | 120 |
nongranular leukocyte | 3.75e-10 | 115 |
blood cell | 3.85e-10 | 11 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 6.43e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.26e-17 | 76 |
bone element | 1.97e-15 | 82 |
skeletal element | 8.19e-14 | 90 |
immune system | 2.81e-13 | 93 |
hematopoietic system | 1.86e-12 | 98 |
blood island | 1.86e-12 | 98 |
skeletal system | 3.75e-12 | 100 |
hemolymphoid system | 4.82e-11 | 108 |
lateral plate mesoderm | 3.04e-09 | 203 |
seminal vesicle | 2.04e-08 | 1 |
seminal fluid secreting gland | 2.04e-08 | 1 |
musculoskeletal system | 3.04e-08 | 167 |
mitral valve | 1.21e-07 | 1 |
left ovary | 1.87e-07 | 4 |