FFCP PHASE1:Hg19::chr1:23885981..23886002,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3399 | |EntrezGene=3399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5362 | |HGNC=5362 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_uc001bhg.1_5end | |association_with_transcript=-3bp_to_uc001bhg.1_5end | ||
|cluster_id=chr1:23885981..23886002,- | |||
|description=CAGE_peak_1_at_ID3_5end | |description=CAGE_peak_1_at_ID3_5end | ||
|id=chr1:23885981..23886002,- | |id=chr1:23885981..23886002,- | ||
|ontology_enrichment_celltype=CL:0000222!4.58e-20!119;CL:0000213!2.70e-14!57;CL:0000215!2.70e-14!57;CL:0000055!3.83e-14!180;CL:0000115!3.56e-10!35;CL:0002321!7.51e-10!248;CL:0000220!7.80e-10!246;CL:0002078!8.53e-10!44;CL:0002139!1.28e-08!24;CL:0000680!1.60e-07!57;CL:0000056!1.60e-07!57;CL:0000355!1.60e-07!57;CL:0000393!3.04e-07!60;CL:0000211!3.04e-07!60;CL:0000183!4.22e-07!59 | |ontology_enrichment_celltype=CL:0000222!4.58e-20!119;CL:0000213!2.70e-14!57;CL:0000215!2.70e-14!57;CL:0000055!3.83e-14!180;CL:0000115!3.56e-10!35;CL:0002321!7.51e-10!248;CL:0000220!7.80e-10!246;CL:0002078!8.53e-10!44;CL:0002139!1.28e-08!24;CL:0000680!1.60e-07!57;CL:0000056!1.60e-07!57;CL:0000355!1.60e-07!57;CL:0000393!3.04e-07!60;CL:0000211!3.04e-07!60;CL:0000183!4.22e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000115;6.72e-09;36!CL:0000213;6.91e-09;58!CL:0000215;6.91e-09;58!CL:0002139;1.27e-08;24!CL:0002078;1.95e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.60e-20,121;CL:0000213,1.01e-14,58;CL:0000215,1.01e-14,58;CL:0000115,1.34e-10,36;CL:0002078,3.37e-10,45;CL:0002321,3.58e-10,250;CL:0002139,1.28e-08,24;CL:0000680,1.46e-07,58;CL:0000056,1.46e-07,58;CL:0000355,1.46e-07,58;CL:0000393,2.76e-07,61;CL:0000211,2.76e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.40e-16!84;UBERON:0000055!1.69e-16!69;UBERON:0002049!3.81e-15!79;UBERON:0007798!3.81e-15!79;UBERON:0001981!7.17e-15!60;UBERON:0007500!7.17e-15!60;UBERON:0004537!7.17e-15!60;UBERON:0006965!7.17e-15!60;UBERON:0003914!2.02e-14!118;UBERON:0001009!9.69e-12!113;UBERON:0004535!1.53e-11!110;UBERON:0001637!7.63e-10!42;UBERON:0003509!7.63e-10!42;UBERON:0004572!7.63e-10!42;UBERON:0002100!9.01e-10!216;UBERON:0000477!1.38e-09!286;UBERON:0000119!3.54e-09!312;UBERON:0000490!6.78e-09!138;UBERON:0000483!7.88e-09!309;UBERON:0004573!1.61e-08!33;UBERON:0004571!1.61e-08!33;UBERON:0003104!1.94e-08!238;UBERON:0009142!1.94e-08!238;UBERON:0009569!7.04e-08!113;UBERON:0006914!8.12e-08!25;UBERON:0005256!1.31e-07!143;UBERON:0003103!1.61e-07!69;UBERON:0001134!1.76e-07!61;UBERON:0002036!1.76e-07!61;UBERON:0003082!1.76e-07!61;UBERON:0000486!2.35e-07!82;UBERON:0000481!2.56e-07!347;UBERON:0002385!2.66e-07!63;UBERON:0001015!2.66e-07!63;UBERON:0000383!2.66e-07!63;UBERON:0004111!3.42e-07!241;UBERON:0000025!4.28e-07!194;UBERON:0000475!4.64e-07!365;UBERON:0004290!6.63e-07!70 | |ontology_enrichment_uberon=UBERON:0004872!1.40e-16!84;UBERON:0000055!1.69e-16!69;UBERON:0002049!3.81e-15!79;UBERON:0007798!3.81e-15!79;UBERON:0001981!7.17e-15!60;UBERON:0007500!7.17e-15!60;UBERON:0004537!7.17e-15!60;UBERON:0006965!7.17e-15!60;UBERON:0003914!2.02e-14!118;UBERON:0001009!9.69e-12!113;UBERON:0004535!1.53e-11!110;UBERON:0001637!7.63e-10!42;UBERON:0003509!7.63e-10!42;UBERON:0004572!7.63e-10!42;UBERON:0002100!9.01e-10!216;UBERON:0000477!1.38e-09!286;UBERON:0000119!3.54e-09!312;UBERON:0000490!6.78e-09!138;UBERON:0000483!7.88e-09!309;UBERON:0004573!1.61e-08!33;UBERON:0004571!1.61e-08!33;UBERON:0003104!1.94e-08!238;UBERON:0009142!1.94e-08!238;UBERON:0009569!7.04e-08!113;UBERON:0006914!8.12e-08!25;UBERON:0005256!1.31e-07!143;UBERON:0003103!1.61e-07!69;UBERON:0001134!1.76e-07!61;UBERON:0002036!1.76e-07!61;UBERON:0003082!1.76e-07!61;UBERON:0000486!2.35e-07!82;UBERON:0000481!2.56e-07!347;UBERON:0002385!2.66e-07!63;UBERON:0001015!2.66e-07!63;UBERON:0000383!2.66e-07!63;UBERON:0004111!3.42e-07!241;UBERON:0000025!4.28e-07!194;UBERON:0000475!4.64e-07!365;UBERON:0004290!6.63e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0007500;6.11e-08;56!UBERON:0001981;6.11e-08;56!UBERON:0004537;6.11e-08;56!UBERON:0006914;8.19e-08;25!UBERON:0000055;9.78e-08;65!UBERON:0004573;1.25e-07;33!UBERON:0004571;1.25e-07;33!UBERON:0001637;1.34e-07;42!UBERON:0003509;1.34e-07;42!UBERON:0004572;1.34e-07;42!UBERON:0004457;3.90e-07;9!UBERON:0000042;3.90e-07;9 | |||
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| ||
|short_description=p1@ID3 | |short_description=p1@ID3 | ||
}} | }} |
Latest revision as of 16:10, 16 September 2015
Short description: | p1@ID3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ID3_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_uc001bhg.1_5end |
EntrezGene: | ID3 |
HGNC: | 5362 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.60e-20 | 121 |
lining cell | 1.01e-14 | 58 |
barrier cell | 1.01e-14 | 58 |
endothelial cell | 1.34e-10 | 36 |
meso-epithelial cell | 3.37e-10 | 45 |
embryonic cell | 3.58e-10 | 250 |
endothelial cell of vascular tree | 1.28e-08 | 24 |
muscle precursor cell | 1.46e-07 | 58 |
myoblast | 1.46e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.46e-07 | 58 |
electrically responsive cell | 2.76e-07 | 61 |
electrically active cell | 2.76e-07 | 61 |