FFCP PHASE1:Hg19::chr1:201368653..201368705,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:201368653..201368705,-
|short_description=p2@LAD1
|description=CAGE_peak_2_at_LAD1_5end
|association_with_transcript=0bp_to_ENST00000367313,NM_005558,uc001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3898 | |EntrezGene=3898 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6472 | |HGNC=6472 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDI4,O00515 | |UniProt=E9PDI4,O00515 | ||
|association_with_transcript=0bp_to_ENST00000367313,NM_005558,uc001gwm.2,uc009wzu.1_5end | |||
|cluster_id=chr1:201368653..201368705,- | |||
|coexpression_cluster_id=C665 | |||
|description=CAGE_peak_2_at_LAD1_5end | |||
|id=chr1:201368653..201368705,- | |||
|ontology_enrichment_celltype=CL:0000066!5.00e-29!254;CL:0002076!2.65e-22!43;CL:0000223!1.47e-20!59;CL:0002368!1.26e-11!13;CL:0002251!5.07e-11!21;CL:0002202!4.82e-08!9;CL:0002632!4.82e-08!9;CL:0002159!1.42e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.79e-20;42!CL:0002251;2.46e-14;20!CL:0002368;7.16e-14;13!CL:0002202;1.60e-09;9!CL:0002632;1.60e-09;9!CL:0002159;2.75e-08;14!CL:1000507;1.88e-07;10!CL:1000494;1.88e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.02e-30,253;CL:0002076,4.63e-27,42;CL:0000223,3.92e-22,58;CL:0002251,2.51e-14,20;CL:0002368,7.51e-14,13;CL:0002202,1.60e-09,9;CL:0002632,1.60e-09,9;CL:0002159,2.76e-08,14;CL:1000507,2.12e-07,10;CL:1000494,2.12e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000223;1.10e-11;58 | |||
|ontology_enrichment_disease=DOID:305!3.80e-13!106;DOID:1749!9.62e-13!14;DOID:0050687!1.38e-08!143;DOID:299!1.41e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.88e-13;14!DOID:299;1.73e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.76e-13,14;DOID:305,3.01e-12,106;DOID:299,1.71e-08,25;DOID:0050687,2.44e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.92e-29!169;UBERON:0000925!6.92e-29!169;UBERON:0006595!6.92e-29!169;UBERON:0001007!1.31e-21!155;UBERON:0001555!1.31e-21!155;UBERON:0007026!1.31e-21!155;UBERON:0004921!2.24e-19!129;UBERON:0004185!2.24e-19!129;UBERON:0000077!6.00e-19!130;UBERON:0000466!7.05e-18!126;UBERON:0000464!8.58e-17!104;UBERON:0001004!2.05e-15!72;UBERON:0000161!6.50e-14!35;UBERON:0005911!7.78e-14!82;UBERON:0001041!6.24e-12!98;UBERON:0005177!1.19e-11!107;UBERON:0001008!4.22e-11!45;UBERON:0000166!1.44e-10!21;UBERON:0006554!1.45e-10!44;UBERON:0005153!1.74e-10!37;UBERON:0000062!2.32e-09!511;UBERON:0003064!2.88e-09!37;UBERON:0005181!2.97e-09!35;UBERON:0002553!3.14e-09!70;UBERON:0000065!4.70e-09!53;UBERON:0000058!5.58e-09!26;UBERON:0003104!7.71e-09!238;UBERON:0009142!7.71e-09!238;UBERON:0005178!7.96e-09!34;UBERON:0002224!7.96e-09!34;UBERON:0009569!9.00e-09!113;UBERON:0005631!1.40e-08!14;UBERON:0000158!1.40e-08!14;UBERON:0005156!1.89e-08!59;UBERON:0000990!1.89e-08!59;UBERON:0000165!9.95e-08!28;UBERON:0000930!9.95e-08!28;UBERON:0000344!2.30e-07!12;UBERON:0005157!2.34e-07!51;UBERON:0000468!3.12e-07!659;UBERON:0004876!3.20e-07!20;UBERON:0002530!3.61e-07!59;UBERON:0000080!3.65e-07!18;UBERON:0002120!3.65e-07!18;UBERON:0004875!3.65e-07!18;UBERON:0005721!3.65e-07!18;UBERON:0005754!3.65e-07!18;UBERON:0007297!3.65e-07!18;UBERON:0002365!4.32e-07!31;UBERON:0002330!4.32e-07!31;UBERON:0003101!5.73e-07!22;UBERON:0000079!5.73e-07!22;UBERON:0000922!7.41e-07!612;UBERON:0000915!7.66e-07!52;UBERON:0007196!7.67e-07!14;UBERON:0001558!7.67e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.02e-13;33!UBERON:0000161;1.03e-10;19!UBERON:0000166;1.03e-10;19!UBERON:0001555;5.00e-10;54!UBERON:0000165;8.14e-10;28!UBERON:0001041;1.62e-09;14!UBERON:0005178;2.91e-09;34!UBERON:0002224;2.91e-09;34!UBERON:0005181;4.27e-09;35!UBERON:0006554;3.64e-08;30!UBERON:0001008;3.64e-08;30!UBERON:0005911;4.33e-08;36!UBERON:0001004;4.38e-08;65!UBERON:0000344;4.39e-08;20!UBERON:0004807;1.36e-07;22!UBERON:0007196;1.43e-07;15!UBERON:0001558;1.43e-07;15!UBERON:0001044;1.57e-07;6!UBERON:0003293;1.57e-07;6!UBERON:0003294;1.57e-07;6!UBERON:0010047;1.57e-07;6!UBERON:0003408;1.57e-07;6!UBERON:0000167;1.57e-07;6!UBERON:0004211;1.88e-07;10!UBERON:0009773;1.88e-07;10!UBERON:0001231;1.88e-07;10!UBERON:0004810;1.88e-07;10!UBERON:0005409;2.46e-07;22!UBERON:0000365;5.65e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.28e-28,160;UBERON:0000925,2.28e-28,160;UBERON:0006595,2.28e-28,160;UBERON:0001007,2.03e-20,145;UBERON:0001555,2.03e-20,145;UBERON:0007026,2.03e-20,145;UBERON:0004921,9.14e-19,118;UBERON:0001004,1.18e-16,74;UBERON:0000161,1.92e-14,36;UBERON:0001008,3.76e-14,48;UBERON:0006554,1.69e-13,47;UBERON:0000166,4.09e-12,22;UBERON:0005177,4.16e-12,101;UBERON:0001041,4.88e-11,87;UBERON:0005181,8.57e-11,35;UBERON:0005153,1.95e-10,37;UBERON:0005178,2.82e-10,34;UBERON:0002224,2.82e-10,34;UBERON:0005631,2.97e-10,14;UBERON:0000158,2.97e-10,14;UBERON:0005911,7.88e-10,82;UBERON:0000065,2.51e-09,54;UBERON:0000165,2.71e-09,29;UBERON:0000930,2.71e-09,29;UBERON:0005157,4.87e-09,47;UBERON:0009569,9.85e-09,112;UBERON:0000915,1.51e-08,52;UBERON:0000344,4.39e-08,20;UBERON:0003102,1.07e-07,99;UBERON:0007196,1.39e-07,15;UBERON:0001558,1.39e-07,15;UBERON:0001044,1.60e-07,6;UBERON:0003293,1.60e-07,6;UBERON:0003294,1.60e-07,6;UBERON:0010047,1.60e-07,6;UBERON:0000167,1.60e-07,6;UBERON:0003124,1.62e-07,7;UBERON:0004810,2.12e-07,10;UBERON:0000365,5.48e-07,5;UBERON:0005156,7.79e-07,59;UBERON:0000990,7.79e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,7.37201809504527,39.7746665744284,19.004399375325,18.4636884759917,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.309632246632152,43.2127975505096,42.4700345477333,48.4377753318492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,65.5731518926576,98.2578773378738,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.7448851435272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.2745624782706,24.819896973766,19.7895170818413,0.243947412259191,0.132529768321485,0.69716365721711,0.310983165046111,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0,0,4.79654910318143,0,20.1940525151871,51.704806498505,24.4285402960263,21.0175770509862,0,0,0,0,0,0,0.462985512576611,0,14.223679163267,16.3112370798026,0,0,0,11.2480600784132,5.71139235876122,7.79763034833126,9.67232045190762,11.3347236020445,24.9198741457387,0,0,0,0.144119953416961,0,0.126995788584338,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,20.3095472868994,11.6504807657348,15.4219049598137,0,0,0,0,0,0,0,0,0,0,0,0,5.19695633243976,12.2308946885004,52.9465686381404,0,0,0.262248829918848,8.12159303233341,4.23584354074281,7.84349769176855,1.46139224653261,0.73886140225013,0,0,0.215915916102139,0,2.16757150035082,3.01013864312912,13.7633187444321,17.4525961875032,6.71624264166535,0,0,0,0.328014645699706,0,4.53380451249978,0,0,28.1390113618124,38.3535545161548,0,0,0,0,0,0,0,0,0,27.1067261192004,24.4081385553685,6.25302291223462,48.4545770298084,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,31.6570750866935,40.2181365321472,33.75620530701,5.46034044505319,19.3727417702053,28.6401508634963,63.4105119557446,13.7834040124176,0,0,0,0,0,0,0,0,0,0,12.7420912310136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.9482378187836,0,0,0,0,32.7079944090635,1.18785872333055,38.7022484645032,0,0,0,0,0.211125408127993,1.19548792950642,4.97311047956066,0.503865495708552,0.102268682502155,0,0,18.3331436340547,22.7356891838024,0,4.24166644238815,0,0,0,0,0,20.8342208868187,5.59743999975653,0,20.7104075879609,12.4584288643455,19.1474022232028,0,0,0,0,0,0,0,0,0,0,56.8848876656701,18.0063604898885,0,15.9089094027761,5.65473159781564,7.17072654685253,3.50901275705111,2.83952539545773,4.26427820814908,0,0,0,0,0,0,0,0,0,6.8557779426842,2.40300221437699,0,22.8910244148056,5.83819925722038,3.66618086960175,0,0,0,0,1.60515529459758,0,0,18.5881387985485,0,28.4100770051561,2.41981432097328,0,0,0,0,0,0,0,0,0.284609546029793,0,4.85967267338367,38.2170349916073,15.4965387713117,2.97035336011451,0,0,0,0,104.748137807493,0,3.38971111170799,0,0,0,9.77756913674015,3.52698809106748,16.4358805949301,0,37.6075988772217,0,0,0,0,32.290082742501,0,0,0,0,0,0,0,0,0,0,0,0,1.79711100449092,0,0,0.0671834724867263,0,0,0.236349546921671,0.494495150286999,0.606631894687664,1.08270229666224,0,0,0,0.160753148465019,0.412618309791701,0,3.37460837327251,11.6070293183692,0,85.2004106502136,4.4919253160543,3.56691199317987,0,0,25.5247212434862,0,0,0,0,0,0,0,0,0,0,0.439656701034247,1.32506888912221,0,0,0,17.6203755579168,1.49502377594773,1.88645166119599,3.31391244277756,0,0,0,33.8320866618196,0,0,0,0,8.16681300501218,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28120759293973,0,0,0,3.89720617678777,8.50334978005524,7.19687734725715,0,0,24.7235184329594,0,0,0,0,0,57.3505981649722,32.3480175217146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7647370486856,4.24691004051865,29.8988615590337,14.7872852672433,0,0,0,0.752103283492572,0,7.03362610109783,2.61906694481422,0,8.42779691437158,0,0,0,0,0,33.4437237782881,10.4204347461752,0,10.8598063493656,0,0,0,0,18.8936048446421,0,0,0,0,0.236387681767936,21.3564291632773,6.51492670659266,0,12.6122473491205,2.73947616152849,0,0,0,0,0,0,0,1.24329698497822,3.58508801897295,55.3007729451273,25.3834141703964,0,0,25.4032230114557,8.7060610046739,0,0,5.03349443090065,5.39826284883836,12.0698745732447,0,0,0,12.1427748264785,0,0,0,6.32498059418176,0,0.905777061400041,7.2543708621468,2.40415516554353,1.88126918544609,0.980593287015622,4.24217784782927,0,0,0.4226557275834,0,0,0,0,14.6414229656639,7.41079230602953,12.4374118368211,6.57302749421866,22.936464170227,0,0,0,0,4.7612415646386,0,0,0,0,0,0,3.05966489225945,1.06886962106224,0.459474497674225,2.75778293221613,0.303114792872958,0,0,0,41.7938604525923,0.714193294391221,0.839655827868079,0.744896571550295,0,0.70011874105981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| ||
|short_description=p2@LAD1 | |||
}} | }} |
Latest revision as of 17:46, 19 September 2015
Short description: | p2@LAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LAD1_5end |
Coexpression cluster: | C665_amniotic_esophagus_tongue_Corneal_tonsil_salivary_Urothelial |
Association with transcript: | 0bp_to_ENST00000367313, NM_005558, uc001gwm.2, uc009wzu.1_5end |
EntrezGene: | LAD1 |
HGNC: | 6472 |
UniProt: | E9PDI4O00515 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.02e-30 | 253 |
endo-epithelial cell | 4.63e-27 | 42 |
endodermal cell | 3.92e-22 | 58 |
epithelial cell of alimentary canal | 2.51e-14 | 20 |
respiratory epithelial cell | 7.51e-14 | 13 |
epithelial cell of tracheobronchial tree | 1.60e-09 | 9 |
epithelial cell of lower respiratory tract | 1.60e-09 | 9 |
general ecto-epithelial cell | 2.76e-08 | 14 |
kidney tubule cell | 2.12e-07 | 10 |
nephron tubule epithelial cell | 2.12e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.76e-13 | 14 |
carcinoma | 3.01e-12 | 106 |
adenocarcinoma | 1.71e-08 | 25 |
cell type cancer | 2.44e-08 | 143 |