FFCP PHASE1:Hg19::chr1:203149741..203149762,-: Difference between revisions
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|id=chr1:203149741..203149762,-
|short_description=p14@CHI3L1
|description=CAGE_peak_14_at_CHI3L1_5end
|association_with_transcript=-480bp_to_ENST00000478742_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1116 | |EntrezGene=1116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1932 | |HGNC=1932 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-480bp_to_ENST00000478742_5end | |||
|cluster_id=chr1:203149741..203149762,- | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_14_at_CHI3L1_5end | |||
|id=chr1:203149741..203149762,- | |||
|ontology_enrichment_celltype=CL:0000153!6.62e-21!9;CL:0000447!6.62e-21!9;CL:0000667!1.65e-16!6;CL:0000058!1.65e-16!6;CL:0000138!1.65e-16!6;CL:0000327!4.87e-13!14;CL:0000499!1.10e-12!27;CL:0000135!1.75e-12!3;CL:0000386!1.75e-12!3;CL:0000388!1.75e-12!3;CL:0000151!2.13e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.03e-56;9!CL:0000447;1.03e-56;9!CL:0000138;8.22e-44;6!CL:0000327;7.62e-34;15!CL:0000499;1.39e-29;28!CL:0002540;2.89e-16;6!CL:0000235;3.21e-16;6!CL:0000135;1.69e-15;3!CL:0000388;1.69e-15;3!CL:0000214;3.46e-15;3!CL:0000151;3.42e-11;36!CL:0002092;5.44e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,8.77e-57,9;CL:0000447,8.77e-57,9;CL:0000058,7.53e-44,6;CL:0000138,7.53e-44,6;CL:0000327,6.91e-34,15;CL:0000499,1.30e-29,28;CL:0002540,2.89e-16,6;CL:0000235,3.75e-16,6;CL:0000135,1.69e-15,3;CL:0000388,1.69e-15,3;CL:0000214,3.22e-15,3;CL:0000151,8.93e-14,36;CL:0002092,5.44e-10,10 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.22e-09;11!UBERON:0009497;1.06e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;8.64e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,7.76e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000043!1.75e-12!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.69e-15;3!UBERON:0000043;1.69e-15;3!UBERON:0007845;1.69e-15;3!UBERON:0006915;3.46e-15;3!UBERON:0007616;3.46e-15;3!UBERON:0002217;3.46e-15;3!UBERON:0002018;3.46e-15;3!UBERON:0001282;1.39e-11;1!UBERON:0009842;1.39e-11;1!UBERON:0003704;1.39e-11;1!UBERON:0001171;1.39e-11;1!UBERON:0001172;1.39e-11;1!UBERON:0002371;2.06e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.69e-15,3;UBERON:0000043,1.69e-15,3;UBERON:0007845,1.69e-15,3;UBERON:0006915,3.22e-15,3;UBERON:0007616,3.22e-15,3;UBERON:0002217,3.22e-15,3;UBERON:0002018,3.22e-15,3;UBERON:0001282,1.47e-11,1;UBERON:0009842,1.47e-11,1;UBERON:0003704,1.47e-11,1;UBERON:0001171,1.47e-11,1;UBERON:0001172,1.47e-11,1 | |||
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| ||
|short_description=p14@CHI3L1 | |||
}} | }} |
Latest revision as of 22:10, 19 September 2015
Short description: | p14@CHI3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CHI3L1_5end |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | -480bp_to_ENST00000478742_5end |
EntrezGene: | CHI3L1 |
HGNC: | 1932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 8.77e-57 | 9 |
carbohydrate secreting cell | 8.77e-57 | 9 |
chondroblast | 7.53e-44 | 6 |
chondrocyte | 7.53e-44 | 6 |
extracellular matrix secreting cell | 6.91e-34 | 15 |
stromal cell | 1.30e-29 | 28 |
mesenchymal stem cell of the bone marrow | 2.89e-16 | 6 |
macrophage | 3.75e-16 | 6 |
fibrocyte | 1.69e-15 | 3 |
tendon cell | 1.69e-15 | 3 |
synovial cell | 3.22e-15 | 3 |
secretory cell | 8.93e-14 | 36 |
bone marrow cell | 5.44e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.69e-15 | 3 |
tendon | 1.69e-15 | 3 |
regular connective tissue | 1.69e-15 | 3 |
stratified squamous epithelium | 3.22e-15 | 3 |
layer of synovial tissue | 3.22e-15 | 3 |
synovial joint | 3.22e-15 | 3 |
synovial membrane of synovial joint | 3.22e-15 | 3 |
intralobular bile duct | 1.47e-11 | 1 |
acinus | 1.47e-11 | 1 |
intrahepatic bile duct | 1.47e-11 | 1 |
portal lobule | 1.47e-11 | 1 |
hepatic acinus | 1.47e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 7.76e-12 | 1 |