FFCP PHASE1:Hg19::chr5:112538965..112538976,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4163 | |EntrezGene=4163 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6935 | |HGNC=6935 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_ENST00000506605_5end | |association_with_transcript=37bp_to_ENST00000506605_5end | ||
|cluster_id=chr5:112538965..112538976,- | |||
|coexpression_cluster_id=C53 | |coexpression_cluster_id=C53 | ||
|description=CAGE_peak_13_at_MCC_5end | |description=CAGE_peak_13_at_MCC_5end | ||
|id=chr5:112538965..112538976,- | |id=chr5:112538965..112538976,- | ||
|ontology_enrichment_celltype=CL:0000066!1.10e-08!254;CL:0000333!3.10e-08!41;CL:0000221!1.17e-07!71;CL:0000133!9.44e-07!59 | |ontology_enrichment_celltype=CL:0000066!1.10e-08!254;CL:0000333!3.10e-08!41;CL:0000221!1.17e-07!71;CL:0000133!9.44e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.12e-22;3!CL:0000148;2.58e-15;10!CL:0000147;4.00e-11;14!CL:0000710;5.82e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.25e-22,3;CL:0000148,2.58e-15,10;CL:0000541,2.58e-15,10;CL:0000147,4.00e-11,14;CL:0000333,1.15e-09,41;CL:0000710,5.82e-08,20;CL:0000133,8.29e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006238;4.64e-07;10!UBERON:0003056;7.08e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!7.90e-14!143;DOID:305!1.03e-13!106;DOID:1749!2.32e-07!14;DOID:162!3.18e-07!235;DOID:14566!7.99e-07!239 | |ontology_enrichment_disease=DOID:0050687!7.90e-14!143;DOID:305!1.03e-13!106;DOID:1749!2.32e-07!14;DOID:162!3.18e-07!235;DOID:14566!7.99e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.27e-09;2!DOID:3905;2.90e-08;9!DOID:4556;7.92e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.22e-09,2;DOID:3905,3.18e-08,9;DOID:4556,8.15e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001557!4.26e-09!19;UBERON:0007100!9.61e-07!27 | |ontology_enrichment_uberon=UBERON:0001557!4.26e-09!19;UBERON:0007100!9.61e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.38e-34;2!UBERON:0002757;2.38e-34;2!UBERON:0010134;2.38e-34;2!UBERON:0005408;2.38e-34;2!UBERON:0001899;2.38e-34;2!UBERON:0003296;9.92e-18;4!UBERON:0010133;9.92e-18;4!UBERON:0002784;9.92e-18;4!UBERON:0001894;1.50e-10;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.59e-34,2;UBERON:0002757,2.59e-34,2;UBERON:0010134,2.59e-34,2;UBERON:0005408,2.59e-34,2;UBERON:0001899,2.59e-34,2;UBERON:0003296,1.03e-17,4;UBERON:0010133,1.03e-17,4;UBERON:0002784,1.03e-17,4;UBERON:0001894,1.53e-10,7;UBERON:0006222,1.53e-10,7 | |||
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| ||
|short_description=p13@MCC | |short_description=p13@MCC | ||
}} | }} |
Latest revision as of 18:41, 19 September 2015
Short description: | p13@MCC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MCC_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | 37bp_to_ENST00000506605_5end |
EntrezGene: | MCC |
HGNC: | 6935 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.25e-22 | 3 |
melanocyte | 2.58e-15 | 10 |
melanoblast | 2.58e-15 | 10 |
pigment cell | 4.00e-11 | 14 |
migratory neural crest cell | 1.15e-09 | 41 |
neurecto-epithelial cell | 5.82e-08 | 20 |
neurectodermal cell | 8.29e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.59e-34 | 2 |
regional part of epithalamus | 2.59e-34 | 2 |
secretory circumventricular organ | 2.59e-34 | 2 |
circumventricular organ | 2.59e-34 | 2 |
epithalamus | 2.59e-34 | 2 |
gland of diencephalon | 1.03e-17 | 4 |
neuroendocrine gland | 1.03e-17 | 4 |
regional part of diencephalon | 1.03e-17 | 4 |
diencephalon | 1.53e-10 | 7 |
future diencephalon | 1.53e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.22e-09 | 2 |
lung carcinoma | 3.18e-08 | 9 |
lung large cell carcinoma | 8.15e-07 | 3 |