FFCP PHASE1:Hg19::chr15:33384612..33384623,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:33384612..33384623,- | |||
|description=CAGE_peak_at_chr15:33384612..33384623,- | |description=CAGE_peak_at_chr15:33384612..33384623,- | ||
|id=chr15:33384612..33384623,- | |id=chr15:33384612..33384623,- | ||
|ontology_enrichment_celltype=CL:0000625!2.97e-22!11;CL:0000791!5.34e-22!18;CL:0000789!5.34e-22!18;CL:0002420!5.34e-22!18;CL:0002419!5.34e-22!18;CL:0000790!5.34e-22!18;CL:0000084!2.16e-15!25;CL:0000827!2.16e-15!25;CL:0000838!3.45e-08!52;CL:0000542!5.34e-08!53;CL:0000051!5.34e-08!53;CL:0000767!1.48e-07!3;CL:0000810!9.81e-07!1;CL:0000895!9.81e-07!1;CL:0002436!9.81e-07!1;CL:0002427!9.81e-07!1;CL:0002428!9.81e-07!1;CL:0002429!9.81e-07!1;CL:0002433!9.81e-07!1;CL:0002431!9.81e-07!1;CL:0002432!9.81e-07!1 | |ontology_enrichment_celltype=CL:0000625!2.97e-22!11;CL:0000791!5.34e-22!18;CL:0000789!5.34e-22!18;CL:0002420!5.34e-22!18;CL:0002419!5.34e-22!18;CL:0000790!5.34e-22!18;CL:0000084!2.16e-15!25;CL:0000827!2.16e-15!25;CL:0000838!3.45e-08!52;CL:0000542!5.34e-08!53;CL:0000051!5.34e-08!53;CL:0000767!1.48e-07!3;CL:0000810!9.81e-07!1;CL:0000895!9.81e-07!1;CL:0002436!9.81e-07!1;CL:0002427!9.81e-07!1;CL:0002428!9.81e-07!1;CL:0002429!9.81e-07!1;CL:0002433!9.81e-07!1;CL:0002431!9.81e-07!1;CL:0002432!9.81e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000895;6.72e-26;1!CL:0000624;2.01e-17;6!CL:0000791;4.93e-13;18!CL:0000789;4.93e-13;18!CL:0002419;4.93e-13;18!CL:0000084;1.41e-09;25!CL:0000898;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,7.62e-26,1;CL:0000895,7.62e-26,1;CL:0002436,7.62e-26,1;CL:0002427,7.62e-26,1;CL:0002428,7.62e-26,1;CL:0002429,7.62e-26,1;CL:0002433,7.62e-26,1;CL:0002431,7.62e-26,1;CL:0002432,7.62e-26,1;CL:0000624,2.01e-17,6;CL:0000893,1.21e-13,2;CL:0002489,1.21e-13,2;CL:0000809,1.21e-13,2;CL:0000808,1.21e-13,2;CL:0000894,1.21e-13,2;CL:0000806,1.21e-13,2;CL:0000807,1.21e-13,2;CL:0000805,1.21e-13,2;CL:0002425,1.21e-13,2;CL:0000791,4.64e-13,18;CL:0000789,4.64e-13,18;CL:0002420,4.64e-13,18;CL:0002419,4.64e-13,18;CL:0000790,4.64e-13,18;CL:0000084,1.35e-09,25;CL:0000827,1.35e-09,25;CL:0000898,1.54e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002427;6.72e-26;1!CL:0002425;1.14e-13;2!CL:0000790;4.93e-13;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.39e-08!15;UBERON:0000179!1.39e-08!15;UBERON:0000463!1.39e-08!15 | |ontology_enrichment_uberon=UBERON:0000178!1.39e-08!15;UBERON:0000179!1.39e-08!15;UBERON:0000463!1.39e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.72e-15;15!UBERON:0000179;1.72e-15;15!UBERON:0000463;1.72e-15;15!UBERON:0002390;4.38e-08;32!UBERON:0002193;6.48e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.85e-15,15;UBERON:0000179,1.85e-15,15;UBERON:0000463,1.85e-15,15;UBERON:0002370,1.80e-07,4;UBERON:0005058,1.80e-07,4;UBERON:0009113,1.80e-07,4;UBERON:0003295,1.80e-07,4;UBERON:0005562,1.80e-07,4 | |||
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|short_description=p@chr15:33384612..33384623,- | |short_description=p@chr15:33384612..33384623,- | ||
}} | }} |
Latest revision as of 00:51, 25 July 2015
Short description: | p@chr15:33384612..33384623, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:33384612..33384623, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 7.62e-26 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 7.62e-26 | 1 |
mature CD4 single-positive thymocyte | 7.62e-26 | 1 |
resting double-positive thymocyte | 7.62e-26 | 1 |
double-positive blast | 7.62e-26 | 1 |
CD69-positive double-positive thymocyte | 7.62e-26 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 7.62e-26 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 7.62e-26 | 1 |
CD24-positive, CD4 single-positive thymocyte | 7.62e-26 | 1 |
CD4-positive, alpha-beta T cell | 2.01e-17 | 6 |
thymocyte | 1.21e-13 | 2 |
double negative thymocyte | 1.21e-13 | 2 |
double-positive, alpha-beta thymocyte | 1.21e-13 | 2 |
DN4 thymocyte | 1.21e-13 | 2 |
DN1 thymic pro-T cell | 1.21e-13 | 2 |
DN2 thymocyte | 1.21e-13 | 2 |
DN3 thymocyte | 1.21e-13 | 2 |
immature single positive thymocyte | 1.21e-13 | 2 |
early T lineage precursor | 1.21e-13 | 2 |
mature alpha-beta T cell | 4.64e-13 | 18 |
alpha-beta T cell | 4.64e-13 | 18 |
immature T cell | 4.64e-13 | 18 |
mature T cell | 4.64e-13 | 18 |
immature alpha-beta T cell | 4.64e-13 | 18 |
T cell | 1.35e-09 | 25 |
pro-T cell | 1.35e-09 | 25 |
naive T cell | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.85e-15 | 15 |
haemolymphatic fluid | 1.85e-15 | 15 |
organism substance | 1.85e-15 | 15 |
thymus | 1.80e-07 | 4 |
hemolymphoid system gland | 1.80e-07 | 4 |
thymic region | 1.80e-07 | 4 |
pharyngeal gland | 1.80e-07 | 4 |
thymus primordium | 1.80e-07 | 4 |