FFCP PHASE1:Hg19::chr17:41620424..41620445,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:41620424..41620445,- | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_at_chr17:41620424..41620445,- | |description=CAGE_peak_at_chr17:41620424..41620445,- | ||
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|ontology_enrichment_celltype=CL:0002322!2.75e-24!5;CL:0000039!1.50e-11!7;CL:0000586!1.50e-11!7 | |ontology_enrichment_celltype=CL:0002322!2.75e-24!5;CL:0000039!1.50e-11!7;CL:0000586!1.50e-11!7 | ||
|ontology_enrichment_celltype_v019=CL:0002322;7.37e-58;5!CL:0000039;2.00e-27;7!CL:0000586;2.00e-27;7!CL:0002321;2.29e-19;15!CL:0000148;4.78e-11;10!CL:0000147;4.82e-08;14 | |ontology_enrichment_celltype_v019=CL:0002322;7.37e-58;5!CL:0000039;2.00e-27;7!CL:0000586;2.00e-27;7!CL:0002321;2.29e-19;15!CL:0000148;4.78e-11;10!CL:0000147;4.82e-08;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.18e-58,5;CL:0000039,2.07e-27,7;CL:0000586,2.07e-27,7;CL:0000148,4.46e-11,10;CL:0000541,4.46e-11,10;CL:0000147,4.59e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.63e-19;10!UBERON:0005564;2.63e-19;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.63e-19;10!UBERON:0005564;2.63e-19;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;1.03e-12;1!DOID:4549;1.03e-12;1!DOID:5861;1.03e-12;1!DOID:6496;1.03e-12;1!DOID:3095;6.55e-09;22!DOID:2994;6.55e-09;22 | |ontology_enrichment_disease_v019=DOID:3371;1.03e-12;1!DOID:4549;1.03e-12;1!DOID:5861;1.03e-12;1!DOID:6496;1.03e-12;1!DOID:3095;6.55e-09;22!DOID:2994;6.55e-09;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,9.73e-13,1;DOID:4549,9.73e-13,1;DOID:5861,9.73e-13,1;DOID:6496,9.73e-13,1;DOID:3095,6.62e-09,22;DOID:2994,6.62e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0001950!3.63e-12!20;UBERON:0002619!5.27e-11!22;UBERON:0003135!5.61e-11!11;UBERON:0000007!8.55e-11!2;UBERON:0002780!1.14e-10!41;UBERON:0001890!1.14e-10!41;UBERON:0006240!1.14e-10!41;UBERON:0003080!2.25e-10!42;UBERON:0000473!4.12e-10!8;UBERON:0000341!4.23e-10!2;UBERON:0000956!1.35e-09!25;UBERON:0000203!1.35e-09!25;UBERON:0002791!6.88e-09!33;UBERON:0001017!1.21e-08!82;UBERON:0001872!1.31e-08!5;UBERON:0001893!1.36e-08!34;UBERON:0001049!1.36e-08!57;UBERON:0005068!1.36e-08!57;UBERON:0006241!1.36e-08!57;UBERON:0007135!1.36e-08!57;UBERON:0002616!3.15e-08!59;UBERON:0005743!4.12e-08!86;UBERON:0003056!6.19e-08!61;UBERON:0000955!6.79e-08!69;UBERON:0006238!6.79e-08!69;UBERON:0001869!2.59e-07!32;UBERON:0000200!3.53e-07!6;UBERON:0000073!4.44e-07!94;UBERON:0001016!4.44e-07!94;UBERON:0002020!7.90e-07!34;UBERON:0003528!7.90e-07!34;UBERON:0002771!9.34e-07!3 | |ontology_enrichment_uberon=UBERON:0001950!3.63e-12!20;UBERON:0002619!5.27e-11!22;UBERON:0003135!5.61e-11!11;UBERON:0000007!8.55e-11!2;UBERON:0002780!1.14e-10!41;UBERON:0001890!1.14e-10!41;UBERON:0006240!1.14e-10!41;UBERON:0003080!2.25e-10!42;UBERON:0000473!4.12e-10!8;UBERON:0000341!4.23e-10!2;UBERON:0000956!1.35e-09!25;UBERON:0000203!1.35e-09!25;UBERON:0002791!6.88e-09!33;UBERON:0001017!1.21e-08!82;UBERON:0001872!1.31e-08!5;UBERON:0001893!1.36e-08!34;UBERON:0001049!1.36e-08!57;UBERON:0005068!1.36e-08!57;UBERON:0006241!1.36e-08!57;UBERON:0007135!1.36e-08!57;UBERON:0002616!3.15e-08!59;UBERON:0005743!4.12e-08!86;UBERON:0003056!6.19e-08!61;UBERON:0000955!6.79e-08!69;UBERON:0006238!6.79e-08!69;UBERON:0001869!2.59e-07!32;UBERON:0000200!3.53e-07!6;UBERON:0000073!4.44e-07!94;UBERON:0001016!4.44e-07!94;UBERON:0002020!7.90e-07!34;UBERON:0003528!7.90e-07!34;UBERON:0002771!9.34e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.64e-24;2!UBERON:0000473;4.80e-24;8!UBERON:0003135;1.40e-17;11!UBERON:0000922;7.16e-14;49!UBERON:0003296;9.19e-13;4!UBERON:0010133;9.19e-13;4!UBERON:0000991;2.52e-09;21!UBERON:0003101;6.55e-09;22!UBERON:0000079;6.55e-09;22!UBERON:0001894;1.13e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000007;1.64e-24;2!UBERON:0000473;4.80e-24;8!UBERON:0003135;1.40e-17;11!UBERON:0000922;7.16e-14;49!UBERON:0003296;9.19e-13;4!UBERON:0010133;9.19e-13;4!UBERON:0000991;2.52e-09;21!UBERON:0003101;6.55e-09;22!UBERON:0000079;6.55e-09;22!UBERON:0001894;1.13e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.34e-24,2;UBERON:0000473,4.94e-24,8;UBERON:0003135,1.43e-17,11;UBERON:0003296,1.10e-12,4;UBERON:0010133,1.10e-12,4;UBERON:0000991,2.55e-09,21;UBERON:0009196,2.55e-09,21;UBERON:0009117,2.55e-09,21;UBERON:0005564,2.55e-09,21;UBERON:0004176,6.62e-09,22;UBERON:0003101,6.62e-09,22;UBERON:0000079,6.62e-09,22;UBERON:0001894,1.25e-07,7;UBERON:0006222,1.25e-07,7 | |||
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|short_description=p@chr17:41620424..41620445,- | |short_description=p@chr17:41620424..41620445,- | ||
}} | }} |
Latest revision as of 17:14, 25 July 2015
Short description: | p@chr17:41620424..41620445, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:41620424..41620445, - |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.18e-58 | 5 |
germ line cell | 2.07e-27 | 7 |
germ cell | 2.07e-27 | 7 |
melanocyte | 4.46e-11 | 10 |
melanoblast | 4.46e-11 | 10 |
pigment cell | 4.59e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.34e-24 | 2 |
testis | 4.94e-24 | 8 |
male reproductive organ | 1.43e-17 | 11 |
gland of diencephalon | 1.10e-12 | 4 |
neuroendocrine gland | 1.10e-12 | 4 |
gonad | 2.55e-09 | 21 |
indifferent external genitalia | 2.55e-09 | 21 |
indifferent gonad | 2.55e-09 | 21 |
gonad primordium | 2.55e-09 | 21 |
external genitalia | 6.62e-09 | 22 |
male organism | 6.62e-09 | 22 |
male reproductive system | 6.62e-09 | 22 |
diencephalon | 1.25e-07 | 7 |
future diencephalon | 1.25e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.73e-13 | 1 |
extraosseous chondrosarcoma | 9.73e-13 | 1 |
myxoid chondrosarcoma | 9.73e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 9.73e-13 | 1 |
germ cell and embryonal cancer | 6.62e-09 | 22 |
germ cell cancer | 6.62e-09 | 22 |