FFCP PHASE1:Hg19::chr12:6419836..6419874,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55200 | |EntrezGene=55200 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25562 | |HGNC=25562 | ||
|TSSclassifier=strong | |||
|UniProt=F5H731 | |UniProt=F5H731 | ||
|association_with_transcript=-29bp_to_ENST00000536531,uc001qns.2_5end | |association_with_transcript=-29bp_to_ENST00000536531,uc001qns.2_5end | ||
|cluster_id=chr12:6419836..6419874,+ | |||
|description=CAGE_peak_1_at_PLEKHG6_5end | |description=CAGE_peak_1_at_PLEKHG6_5end | ||
|id=chr12:6419836..6419874,+ | |id=chr12:6419836..6419874,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.32e-19!254;CL:0000223!1.26e-12!59;CL:0002076!1.20e-10!43;CL:0000039!5.24e-08!7;CL:0000586!5.24e-08!7 | |ontology_enrichment_celltype=CL:0000066!2.32e-19!254;CL:0000223!1.26e-12!59;CL:0002076!1.20e-10!43;CL:0000039!5.24e-08!7;CL:0000586!5.24e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.27e-10;7!CL:0000586;1.27e-10;7!CL:0002076;5.86e-08;42!CL:0000349;6.83e-07;19!CL:0002322;7.40e-07;5 | |ontology_enrichment_celltype_v019=CL:0000039;1.27e-10;7!CL:0000586;1.27e-10;7!CL:0002076;5.86e-08;42!CL:0000349;6.83e-07;19!CL:0002322;7.40e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.16e-16,253;CL:0000223,2.33e-13,58;CL:0002076,3.35e-11,42;CL:0000039,1.26e-10,7;CL:0000586,1.26e-10,7;CL:0000349,6.79e-07,19;CL:0002322,6.93e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;5.60e-08;58 | |ontology_enrichment_development_v019=CL:0000223;5.60e-08;58 | ||
|ontology_enrichment_disease=DOID:305!1.05e-14!106;DOID:0050687!5.85e-09!143 | |ontology_enrichment_disease=DOID:305!1.05e-14!106;DOID:0050687!5.85e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:299;3.03e-08;25!DOID:305;5.94e-07;106 | |ontology_enrichment_disease_v019=DOID:299;3.03e-08;25!DOID:305;5.94e-07;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.71e-15,106;DOID:0050687,1.41e-10,143;DOID:299,3.17e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.75e-21!169;UBERON:0000925!9.75e-21!169;UBERON:0006595!9.75e-21!169;UBERON:0001007!5.69e-17!155;UBERON:0001555!5.69e-17!155;UBERON:0007026!5.69e-17!155;UBERON:0004921!1.97e-16!129;UBERON:0004185!1.97e-16!129;UBERON:0000466!4.51e-16!126;UBERON:0000077!1.58e-15!130;UBERON:0000464!9.48e-15!104;UBERON:0005177!3.67e-11!107;UBERON:0001041!6.01e-10!98;UBERON:0005911!8.96e-10!82;UBERON:0005631!3.22e-09!14;UBERON:0000158!3.22e-09!14;UBERON:0005178!2.37e-08!34;UBERON:0002224!2.37e-08!34;UBERON:0001004!5.96e-08!72;UBERON:0005181!6.86e-08!35;UBERON:0002553!7.65e-08!70;UBERON:0009569!8.36e-08!113;UBERON:0003124!2.05e-07!7;UBERON:0005153!3.60e-07!37;UBERON:0005409!5.54e-07!35;UBERON:0001008!7.45e-07!45 | |ontology_enrichment_uberon=UBERON:0004119!9.75e-21!169;UBERON:0000925!9.75e-21!169;UBERON:0006595!9.75e-21!169;UBERON:0001007!5.69e-17!155;UBERON:0001555!5.69e-17!155;UBERON:0007026!5.69e-17!155;UBERON:0004921!1.97e-16!129;UBERON:0004185!1.97e-16!129;UBERON:0000466!4.51e-16!126;UBERON:0000077!1.58e-15!130;UBERON:0000464!9.48e-15!104;UBERON:0005177!3.67e-11!107;UBERON:0001041!6.01e-10!98;UBERON:0005911!8.96e-10!82;UBERON:0005631!3.22e-09!14;UBERON:0000158!3.22e-09!14;UBERON:0005178!2.37e-08!34;UBERON:0002224!2.37e-08!34;UBERON:0001004!5.96e-08!72;UBERON:0005181!6.86e-08!35;UBERON:0002553!7.65e-08!70;UBERON:0009569!8.36e-08!113;UBERON:0003124!2.05e-07!7;UBERON:0005153!3.60e-07!37;UBERON:0005409!5.54e-07!35;UBERON:0001008!7.45e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.79e-14;33!UBERON:0005409;1.03e-11;22!UBERON:0000160;3.79e-09;17!UBERON:0005631;1.31e-08;10!UBERON:0000158;1.31e-08;10!UBERON:0001555;2.67e-07;54!UBERON:0001041;4.53e-07;14!UBERON:0000478;5.52e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0004921;1.79e-14;33!UBERON:0005409;1.03e-11;22!UBERON:0000160;3.79e-09;17!UBERON:0005631;1.31e-08;10!UBERON:0000158;1.31e-08;10!UBERON:0001555;2.67e-07;54!UBERON:0001041;4.53e-07;14!UBERON:0000478;5.52e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.02e-17,160;UBERON:0000925,1.02e-17,160;UBERON:0006595,1.02e-17,160;UBERON:0004921,1.24e-15,118;UBERON:0001007,7.29e-15,145;UBERON:0001555,7.29e-15,145;UBERON:0007026,7.29e-15,145;UBERON:0005631,7.76e-13,14;UBERON:0000158,7.76e-13,14;UBERON:0003124,8.55e-10,7;UBERON:0005409,8.60e-10,25;UBERON:0000160,3.63e-09,17;UBERON:0005177,3.76e-08,101;UBERON:0001008,4.84e-08,48;UBERON:0001041,1.14e-07,87;UBERON:0006554,1.95e-07,47;UBERON:0005911,2.98e-07,82;UBERON:0000478,5.61e-07,24 | |||
|phase1_expression=0,0.856402095563933,0.845726424575827,0,0.893922188854576,0,7.59899634504932,0,3.91778442299758,2.7030733015166,14.653824527421,3.71350332621293,5.53910654279752,0.495065411840187,0.662794751455832,0.672325146451775,0,0,0,0.492484232307152,0.204000691244253,0.313454721478088,0,0.410623275218653,0.376627918784408,0.382067028739756,0.410502947249729,0.550975469195755,0,0,0.464448369948228,1.83884244895785,1.50602959389125,3.32778609150109,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0,0.72038491523742,4.00724817121796,8.52804218404188,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,6.97750483428055,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.468642863667593,0,0,0,0,0,0,0,0.368502951935304,0.103325781175765,0,0,0,0,0.505008341862199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,1.15956511897978,0.818238361772504,0.860413786167011,5.61079048196139,5.83130980614535,9.06312754382243,4.76840853070704,7.56962552626885,9.12443397689575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,17.2183813960359,0,0.768251997860379,2.24803506515239,0.603173834469785,2.22212268380471,0,0,0,0.231860809950154,0,0,0,0,0,1.71697232418975,0,0,0,0,0.671928512795438,0.850650583454319,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,2.50085260529839,0.271265023699736,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0,0,7.57818928615649,6.65741758041988,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,16.316025694869,0.40101294060657,5.34069735828199,0,0,0,4.51199612907412,1.46329140498388,1.56869953835371,0,0.633309773357254,0,0,0,0,1.08378575017541,0.501689773854853,2.03901018436031,5.81753206250107,1.56712328305525,0,0,2.82095137628028,2.62411716559765,1.95227036798582,4.84292754744295,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0.826424576804891,0,0.255225424989168,1.8208400553999,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0.379473173765715,0,1.05844323998063,2.68120910214315,2.17781969722645,7.34321646058877,2.15252686335615,0,8.42517291719684,2.29723400206959,0,0,0,0,0,0,0,0,0,0,5.3908847515827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.73130810122743,3.36968812325356,0,0,0,31.5142719853751,16.9269868074604,24.5728561679386,0,0,0,0,1.05562704063997,1.19548792950642,2.48655523978033,3.52705846995986,0,0.123084805461069,0,2.51631383212515,0.537063524026827,0,1.87422470710174,0,0,0,0,0,0,0.174919999992391,10.1499940560871,6.37243310398798,3.55955110409873,8.27356886187777,0,0,0.347249989866585,0.885741385813839,0,0,0,0,0,0,5.85579725970134,0.923403102045565,0,32.9706383274926,41.5577893617245,21.5121796405576,34.4521252510473,8.61017377977506,27.1847735769504,0,0,0,0,0,0,0,0,0,2.44849212238722,15.5488378577335,0,12.9384051040206,9.37650183735395,17.1088440581415,0,0,0,0.067401132980677,0,0,0,11.5442125169933,0,0.789168805698781,7.25944296291983,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,1.13843818411917,0,3.99187398170801,0,0.609414446062818,1.22308667769421,0,0,0,0,6.11030803877042,0,2.03382666702479,0,0,0,4.30213042016567,1.04206466326994,2.34798294213288,3.59657297247834,1.44090417154106,0,0.171594997861965,0,0,4.00679858848552,0,0,0,0,0.600420288709789,0,0,0.859530882839914,0,1.39641200636127,0.229160424011684,0.717873024576814,4.19325901047881,0,0,0,0,9.31967596219631,3.23011047459617,3.13180261848433,3.03315947343832,0.393709926058995,0,0,0,8.68067001711104,7.70220844944509,5.40072439437941,1.5748172408605,9.2856234546954,0,0,0.551639951094387,1.46872846777995,0.739202355635845,0,3.64638874906946,0,0,0,0,0,0,0,0,0,0,0.58620893471233,2.65013777824443,0.258565912723101,0,0,9.16259529011673,1.60181118851542,0.78602152549833,0,0,0,0,1.27668251554036,17.4085697078232,12.2838048071123,19.912462489625,16.0657589047804,2.66991963625398,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0.176689145945881,0,0,0,0,0,0,2.92290463259083,7.30756621723497,2.45348091383766,0,0,2.3244333569449,0,0,0,0,0,5.87493932421667,2.48830904013189,0,0,0,0,0.169732529954025,0,0,0,0.318004350653419,0,6.40456598628376,0,0,0,0,0,0,0,0,0,0,0,4.9547283806051,0,2.31051332300676,0,0,0,0.0752103283492573,0,2.34454203369928,17.0239351412925,0,4.13997041407727,0,0,0,0,0,6.57909320228619,2.48105589194647,0,5.11049710558381,0,0,0.6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| |phase1_expression=0,0.856402095563933,0.845726424575827,0,0.893922188854576,0,7.59899634504932,0,3.91778442299758,2.7030733015166,14.653824527421,3.71350332621293,5.53910654279752,0.495065411840187,0.662794751455832,0.672325146451775,0,0,0,0.492484232307152,0.204000691244253,0.313454721478088,0,0.410623275218653,0.376627918784408,0.382067028739756,0.410502947249729,0.550975469195755,0,0,0.464448369948228,1.83884244895785,1.50602959389125,3.32778609150109,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0,0.72038491523742,4.00724817121796,8.52804218404188,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,6.97750483428055,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.468642863667593,0,0,0,0,0,0,0,0.368502951935304,0.103325781175765,0,0,0,0,0.505008341862199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,1.15956511897978,0.818238361772504,0.860413786167011,5.61079048196139,5.83130980614535,9.06312754382243,4.76840853070704,7.56962552626885,9.12443397689575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,17.2183813960359,0,0.768251997860379,2.24803506515239,0.603173834469785,2.22212268380471,0,0,0,0.231860809950154,0,0,0,0,0,1.71697232418975,0,0,0,0,0.671928512795438,0.850650583454319,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,2.50085260529839,0.271265023699736,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0,0,7.57818928615649,6.65741758041988,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,16.316025694869,0.40101294060657,5.34069735828199,0,0,0,4.51199612907412,1.46329140498388,1.56869953835371,0,0.633309773357254,0,0,0,0,1.08378575017541,0.501689773854853,2.03901018436031,5.81753206250107,1.56712328305525,0,0,2.82095137628028,2.62411716559765,1.95227036798582,4.84292754744295,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0.826424576804891,0,0.255225424989168,1.8208400553999,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0.379473173765715,0,1.05844323998063,2.68120910214315,2.17781969722645,7.34321646058877,2.15252686335615,0,8.42517291719684,2.29723400206959,0,0,0,0,0,0,0,0,0,0,5.3908847515827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.73130810122743,3.36968812325356,0,0,0,31.5142719853751,16.9269868074604,24.5728561679386,0,0,0,0,1.05562704063997,1.19548792950642,2.48655523978033,3.52705846995986,0,0.123084805461069,0,2.51631383212515,0.537063524026827,0,1.87422470710174,0,0,0,0,0,0,0.174919999992391,10.1499940560871,6.37243310398798,3.55955110409873,8.27356886187777,0,0,0.347249989866585,0.885741385813839,0,0,0,0,0,0,5.85579725970134,0.923403102045565,0,32.9706383274926,41.5577893617245,21.5121796405576,34.4521252510473,8.61017377977506,27.1847735769504,0,0,0,0,0,0,0,0,0,2.44849212238722,15.5488378577335,0,12.9384051040206,9.37650183735395,17.1088440581415,0,0,0,0.067401132980677,0,0,0,11.5442125169933,0,0.789168805698781,7.25944296291983,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,1.13843818411917,0,3.99187398170801,0,0.609414446062818,1.22308667769421,0,0,0,0,6.11030803877042,0,2.03382666702479,0,0,0,4.30213042016567,1.04206466326994,2.34798294213288,3.59657297247834,1.44090417154106,0,0.171594997861965,0,0,4.00679858848552,0,0,0,0,0.600420288709789,0,0,0.859530882839914,0,1.39641200636127,0.229160424011684,0.717873024576814,4.19325901047881,0,0,0,0,9.31967596219631,3.23011047459617,3.13180261848433,3.03315947343832,0.393709926058995,0,0,0,8.68067001711104,7.70220844944509,5.40072439437941,1.5748172408605,9.2856234546954,0,0,0.551639951094387,1.46872846777995,0.739202355635845,0,3.64638874906946,0,0,0,0,0,0,0,0,0,0,0.58620893471233,2.65013777824443,0.258565912723101,0,0,9.16259529011673,1.60181118851542,0.78602152549833,0,0,0,0,1.27668251554036,17.4085697078232,12.2838048071123,19.912462489625,16.0657589047804,2.66991963625398,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0.176689145945881,0,0,0,0,0,0,2.92290463259083,7.30756621723497,2.45348091383766,0,0,2.3244333569449,0,0,0,0,0,5.87493932421667,2.48830904013189,0,0,0,0,0.169732529954025,0,0,0,0.318004350653419,0,6.40456598628376,0,0,0,0,0,0,0,0,0,0,0,4.9547283806051,0,2.31051332300676,0,0,0,0.0752103283492573,0,2.34454203369928,17.0239351412925,0,4.13997041407727,0,0,0,0,0,6.57909320228619,2.48105589194647,0,5.11049710558381,0,0,0.6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| ||
|short_description=p1@PLEKHG6 | |short_description=p1@PLEKHG6 | ||
}} | }} |
Latest revision as of 19:46, 19 September 2015
Short description: | p1@PLEKHG6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLEKHG6_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000536531, uc001qns.2_5end |
EntrezGene: | PLEKHG6 |
HGNC: | 25562 |
UniProt: | F5H731 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.16e-16 | 253 |
endodermal cell | 2.33e-13 | 58 |
endo-epithelial cell | 3.35e-11 | 42 |
germ line cell | 1.26e-10 | 7 |
germ cell | 1.26e-10 | 7 |
extraembryonic cell | 6.79e-07 | 19 |
embryonic stem cell | 6.93e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.02e-17 | 160 |
endoderm | 1.02e-17 | 160 |
presumptive endoderm | 1.02e-17 | 160 |
subdivision of digestive tract | 1.24e-15 | 118 |
digestive system | 7.29e-15 | 145 |
digestive tract | 7.29e-15 | 145 |
primitive gut | 7.29e-15 | 145 |
extraembryonic membrane | 7.76e-13 | 14 |
membranous layer | 7.76e-13 | 14 |
chorion | 8.55e-10 | 7 |
gastrointestinal system | 8.60e-10 | 25 |
intestine | 3.63e-09 | 17 |
trunk region element | 3.76e-08 | 101 |
renal system | 4.84e-08 | 48 |
foregut | 1.14e-07 | 87 |
urinary system structure | 1.95e-07 | 47 |
endo-epithelium | 2.98e-07 | 82 |
extraembryonic structure | 5.61e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.71e-15 | 106 |
cell type cancer | 1.41e-10 | 143 |
adenocarcinoma | 3.17e-08 | 25 |