FFCP PHASE1:Hg19::chr2:234296792..234296806,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8527 | |EntrezGene=8527 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2851 | |HGNC=2851 | ||
|TSSclassifier=strong | |||
|UniProt=Q16760 | |UniProt=Q16760 | ||
|association_with_transcript=0bp_to_ENST00000409813,NM_003648,uc002vuj.1_5end | |association_with_transcript=0bp_to_ENST00000409813,NM_003648,uc002vuj.1_5end | ||
|cluster_id=chr2:234296792..234296806,+ | |||
|coexpression_cluster_id=C285 | |coexpression_cluster_id=C285 | ||
|description=CAGE_peak_13_at_DGKD_5end | |description=CAGE_peak_13_at_DGKD_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!4.19e-11!12;CL:0000417!4.19e-11!12;CL:0000668!4.19e-11!12;CL:0000414!4.19e-11!12;CL:0000412!4.19e-11!12;CL:0000182!4.19e-11!12 | |ontology_enrichment_celltype=CL:0000181!4.19e-11!12;CL:0000417!4.19e-11!12;CL:0000668!4.19e-11!12;CL:0000414!4.19e-11!12;CL:0000412!4.19e-11!12;CL:0000182!4.19e-11!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.12e-08;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.12e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.73e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.68e-35;29!UBERON:0006595;7.26e-07;86 | |ontology_enrichment_development_v019=UBERON:0008947;7.68e-35;29!UBERON:0006595;7.26e-07;86 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.66e-10,106;DOID:0050687,2.29e-07,143 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001737;1.16e-92;9!UBERON:0001557;1.16e-92;9!UBERON:0000072;1.16e-24;37!UBERON:0000065;2.52e-20;44!UBERON:0001004;4.16e-09;65!UBERON:0002107;5.05e-09;19!UBERON:0006925;5.05e-09;19!UBERON:0002423;6.76e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.16e-92;9!UBERON:0001557;1.16e-92;9!UBERON:0000072;1.16e-24;37!UBERON:0000065;2.52e-20;44!UBERON:0001004;4.16e-09;65!UBERON:0002107;5.05e-09;19!UBERON:0006925;5.05e-09;19!UBERON:0002423;6.76e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.13e-93,9;UBERON:0001557,6.74e-44,19;UBERON:0008947,1.49e-26,38;UBERON:0003258,1.49e-26,38;UBERON:0001041,1.30e-21,87;UBERON:0000072,3.21e-21,47;UBERON:0000065,2.68e-18,54;UBERON:0004921,1.05e-17,118;UBERON:0001007,5.01e-14,145;UBERON:0001555,5.01e-14,145;UBERON:0007026,5.01e-14,145;UBERON:0001004,5.53e-13,74;UBERON:0004119,1.64e-12,160;UBERON:0000925,1.64e-12,160;UBERON:0006595,1.64e-12,160;UBERON:0001048,8.35e-11,160;UBERON:0011216,1.51e-09,223;UBERON:0002107,7.10e-09,19;UBERON:0006925,7.10e-09,19;UBERON:0008836,7.10e-09,19;UBERON:0008835,1.09e-07,22;UBERON:0003894,1.09e-07,22;UBERON:0009854,2.31e-07,23;UBERON:0007499,8.71e-07,25;UBERON:0009497,8.71e-07,25;UBERON:0000015,8.71e-07,25;UBERON:0002423,8.71e-07,25;UBERON:0006235,8.71e-07,25;UBERON:0004161,8.71e-07,25 | |||
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| ||
|short_description=p13@DGKD | |short_description=p13@DGKD | ||
}} | }} |
Latest revision as of 23:01, 15 September 2015
Short description: | p13@DGKD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_DGKD_5end |
Coexpression cluster: | C285_cervical_Hep2_small_colon_temporal_duodenum_bronchogenic |
Association with transcript: | 0bp_to_ENST00000409813, NM_003648, uc002vuj.1_5end |
EntrezGene: | DGKD |
HGNC: | 2851 |
UniProt: | Q16760 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.73e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.13e-93 | 9 |
upper respiratory tract | 6.74e-44 | 19 |
respiratory primordium | 1.49e-26 | 38 |
endoderm of foregut | 1.49e-26 | 38 |
foregut | 1.30e-21 | 87 |
segment of respiratory tract | 3.21e-21 | 47 |
respiratory tract | 2.68e-18 | 54 |
subdivision of digestive tract | 1.05e-17 | 118 |
digestive system | 5.01e-14 | 145 |
digestive tract | 5.01e-14 | 145 |
primitive gut | 5.01e-14 | 145 |
respiratory system | 5.53e-13 | 74 |
endoderm-derived structure | 1.64e-12 | 160 |
endoderm | 1.64e-12 | 160 |
presumptive endoderm | 1.64e-12 | 160 |
primordium | 8.35e-11 | 160 |
organ system subdivision | 1.51e-09 | 223 |
liver | 7.10e-09 | 19 |
digestive gland | 7.10e-09 | 19 |
liver bud | 7.10e-09 | 19 |
hepatic diverticulum | 1.09e-07 | 22 |
liver primordium | 1.09e-07 | 22 |
digestive tract diverticulum | 2.31e-07 | 23 |
epithelial sac | 8.71e-07 | 25 |
epithelium of foregut-midgut junction | 8.71e-07 | 25 |
anatomical boundary | 8.71e-07 | 25 |
hepatobiliary system | 8.71e-07 | 25 |
foregut-midgut junction | 8.71e-07 | 25 |
septum transversum | 8.71e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.66e-10 | 106 |
cell type cancer | 2.29e-07 | 143 |