FFCP PHASE1:Hg19::chr2:74128518..74128535,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=72 | |EntrezGene=72 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=145 | |HGNC=145 | ||
|TSSclassifier=strong | |||
|UniProt=P63267 | |UniProt=P63267 | ||
|association_with_transcript=79bp_to_CR536515,CR541794_5end | |association_with_transcript=79bp_to_CR536515,CR541794_5end | ||
|cluster_id=chr2:74128518..74128535,+ | |||
|coexpression_cluster_id=C48 | |coexpression_cluster_id=C48 | ||
|description=CAGE_peak_3_at_ACTG2_5end | |description=CAGE_peak_3_at_ACTG2_5end | ||
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|ontology_enrichment_celltype=CL:0002622!8.39e-07!3 | |ontology_enrichment_celltype=CL:0002622!8.39e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002594;4.18e-15;4 | |ontology_enrichment_celltype_v019=CL:0002594;4.18e-15;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002594,4.61e-15,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.32e-14;2!UBERON:0009143;3.32e-08;1!UBERON:0000358;4.50e-08;1!UBERON:0005754;4.50e-08;1!UBERON:0004874;4.50e-08;1!UBERON:0006242;1.04e-07;1 | |ontology_enrichment_development_v019=UBERON:0007297;4.32e-14;2!UBERON:0009143;3.32e-08;1!UBERON:0000358;4.50e-08;1!UBERON:0005754;4.50e-08;1!UBERON:0004874;4.50e-08;1!UBERON:0006242;1.04e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!1.06e-15!59;UBERON:0000990!1.06e-15!59;UBERON:0003101!1.27e-13!22;UBERON:0000079!1.27e-13!22;UBERON:0001046!1.49e-11!19;UBERON:0000162!8.39e-11!14;UBERON:0001353!8.39e-11!14;UBERON:0000163!8.39e-11!14;UBERON:0006866!8.39e-11!14;UBERON:0000164!8.39e-11!14;UBERON:0000931!8.39e-11!14;UBERON:0003937!4.14e-10!12;UBERON:0005399!4.14e-10!12;UBERON:0004122!5.92e-10!15;UBERON:0003133!6.84e-10!48;UBERON:0004921!1.59e-08!129;UBERON:0004185!1.59e-08!129;UBERON:0002367!2.18e-08!11;UBERON:0010147!2.18e-08!11;UBERON:0009846!2.18e-08!11;UBERON:0003353!2.18e-08!11;UBERON:0004902!2.18e-08!11;UBERON:0003820!2.18e-08!11;UBERON:0009847!2.18e-08!11;UBERON:0007023!2.27e-08!115;UBERON:0006947!5.54e-08!3;UBERON:0004054!5.54e-08!3;UBERON:0001007!1.35e-07!155;UBERON:0001555!1.35e-07!155;UBERON:0007026!1.35e-07!155;UBERON:0000160!2.72e-07!27;UBERON:0003135!7.71e-07!11;UBERON:0000059!7.71e-07!11;UBERON:0004175!8.01e-07!25;UBERON:0004119!8.30e-07!169;UBERON:0000925!8.30e-07!169;UBERON:0006595!8.30e-07!169 | |ontology_enrichment_uberon=UBERON:0005156!1.06e-15!59;UBERON:0000990!1.06e-15!59;UBERON:0003101!1.27e-13!22;UBERON:0000079!1.27e-13!22;UBERON:0001046!1.49e-11!19;UBERON:0000162!8.39e-11!14;UBERON:0001353!8.39e-11!14;UBERON:0000163!8.39e-11!14;UBERON:0006866!8.39e-11!14;UBERON:0000164!8.39e-11!14;UBERON:0000931!8.39e-11!14;UBERON:0003937!4.14e-10!12;UBERON:0005399!4.14e-10!12;UBERON:0004122!5.92e-10!15;UBERON:0003133!6.84e-10!48;UBERON:0004921!1.59e-08!129;UBERON:0004185!1.59e-08!129;UBERON:0002367!2.18e-08!11;UBERON:0010147!2.18e-08!11;UBERON:0009846!2.18e-08!11;UBERON:0003353!2.18e-08!11;UBERON:0004902!2.18e-08!11;UBERON:0003820!2.18e-08!11;UBERON:0009847!2.18e-08!11;UBERON:0007023!2.27e-08!115;UBERON:0006947!5.54e-08!3;UBERON:0004054!5.54e-08!3;UBERON:0001007!1.35e-07!155;UBERON:0001555!1.35e-07!155;UBERON:0007026!1.35e-07!155;UBERON:0000160!2.72e-07!27;UBERON:0003135!7.71e-07!11;UBERON:0000059!7.71e-07!11;UBERON:0004175!8.01e-07!25;UBERON:0004119!8.30e-07!169;UBERON:0000925!8.30e-07!169;UBERON:0006595!8.30e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.12e-22;17!UBERON:0005409;2.21e-21;22!UBERON:0006947;2.00e-20;3!UBERON:0004054;2.00e-20;3!UBERON:0004921;2.75e-16;33!UBERON:0005904;1.83e-15;4!UBERON:0001310;4.18e-15;4!UBERON:0002108;4.82e-12;4!UBERON:0003135;7.73e-10;11!UBERON:0000059;1.01e-09;11!UBERON:0001000;4.50e-08;1!UBERON:0000989;4.50e-08;1!UBERON:0000998;4.50e-08;1!UBERON:0008811;4.50e-08;1!UBERON:0006868;4.50e-08;1!UBERON:0005352;4.50e-08;1!UBERON:0005795;1.04e-07;1!UBERON:0001301;1.04e-07;1!UBERON:0004175;1.43e-07;21!UBERON:0003101;2.45e-07;22!UBERON:0000079;2.45e-07;22!UBERON:0001555;3.97e-07;54!UBERON:0001155;5.32e-07;9!UBERON:0010260;5.55e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0000160;7.12e-22;17!UBERON:0005409;2.21e-21;22!UBERON:0006947;2.00e-20;3!UBERON:0004054;2.00e-20;3!UBERON:0004921;2.75e-16;33!UBERON:0005904;1.83e-15;4!UBERON:0001310;4.18e-15;4!UBERON:0002108;4.82e-12;4!UBERON:0003135;7.73e-10;11!UBERON:0000059;1.01e-09;11!UBERON:0001000;4.50e-08;1!UBERON:0000989;4.50e-08;1!UBERON:0000998;4.50e-08;1!UBERON:0008811;4.50e-08;1!UBERON:0006868;4.50e-08;1!UBERON:0005352;4.50e-08;1!UBERON:0005795;1.04e-07;1!UBERON:0001301;1.04e-07;1!UBERON:0004175;1.43e-07;21!UBERON:0003101;2.45e-07;22!UBERON:0000079;2.45e-07;22!UBERON:0001555;3.97e-07;54!UBERON:0001155;5.32e-07;9!UBERON:0010260;5.55e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.02e-22,17;UBERON:0006947,1.76e-20,3;UBERON:0004054,1.76e-20,3;UBERON:0005409,8.12e-19,25;UBERON:0005904,1.66e-15,4;UBERON:0001310,4.61e-15,4;UBERON:0002108,4.64e-12,4;UBERON:0003135,7.13e-10,11;UBERON:0000059,9.40e-10,11;UBERON:0007023,1.94e-08,114;UBERON:0000989,4.07e-08,1;UBERON:0008811,4.07e-08,1;UBERON:0006258,4.07e-08,1;UBERON:0005876,4.07e-08,1;UBERON:0004874,4.07e-08,1;UBERON:0001000,4.35e-08,1;UBERON:0005352,4.35e-08,1;UBERON:0000998,4.99e-08,1;UBERON:0006868,4.99e-08,1;UBERON:0001301,8.51e-08,1;UBERON:0003133,1.47e-07,48;UBERON:0005156,1.62e-07,59;UBERON:0000990,1.62e-07,59;UBERON:0003101,2.40e-07,22;UBERON:0000079,2.40e-07,22;UBERON:0001155,5.00e-07,9;UBERON:0010260,5.78e-07,9 | |||
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|short_description=p3@ACTG2 | |short_description=p3@ACTG2 | ||
}} | }} |
Latest revision as of 09:49, 18 September 2015
Short description: | p3@ACTG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACTG2_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 79bp_to_CR536515, CR541794_5end |
EntrezGene: | ACTG2 |
HGNC: | 145 |
UniProt: | P63267 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 4.61e-15 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.02e-22 | 17 |
male genital duct | 1.76e-20 | 3 |
internal male genitalia | 1.76e-20 | 3 |
gastrointestinal system | 8.12e-19 | 25 |
duct of male reproductive system | 1.66e-15 | 4 |
umbilical artery | 4.61e-15 | 4 |
small intestine | 4.64e-12 | 4 |
male reproductive organ | 7.13e-10 | 11 |
large intestine | 9.40e-10 | 11 |
adult organism | 1.94e-08 | 114 |
penis | 4.07e-08 | 1 |
intromittent organ | 4.07e-08 | 1 |
lateral plate mesenchyme | 4.07e-08 | 1 |
undifferentiated genital tubercle | 4.07e-08 | 1 |
somatopleure | 4.07e-08 | 1 |
vas deferens | 4.35e-08 | 1 |
spermatic cord | 4.35e-08 | 1 |
seminal vesicle | 4.99e-08 | 1 |
seminal fluid secreting gland | 4.99e-08 | 1 |
epididymis | 8.51e-08 | 1 |
reproductive organ | 1.47e-07 | 48 |
reproductive structure | 1.62e-07 | 59 |
reproductive system | 1.62e-07 | 59 |
male organism | 2.40e-07 | 22 |
male reproductive system | 2.40e-07 | 22 |
colon | 5.00e-07 | 9 |
umbilical blood vessel | 5.78e-07 | 9 |